| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is gloB [H]
Identifier: 222111167
GI number: 222111167
Start: 2111806
End: 2112585
Strand: Direct
Name: gloB [H]
Synonym: Dtpsy_1975
Alternate gene names: 222111167
Gene position: 2111806-2112585 (Clockwise)
Preceding gene: 222111164
Following gene: 222111168
Centisome position: 55.62
GC content: 63.97
Gene sequence:
>780_bases ATGAAGAACTTGCTGCCATTGCCCGCCTTCGCCGACAACTACATCTGGATGTTGTACGACGCGCAGCGTGCGGTCGTTGT GGATCCCGGCGATGCAGAACCCGTGTTGCAGGCGCTGCGCAGCATGGGGCTGCCATTGGAAGCGATTCTAGTCACGCACC ACCATGGCGACCACGTGGGCGGGGTGAACGCCCTGCGCGAAGCCACGGGCGCAACCGTGTATGGCCCTGCCACGGAGCCC ATGCCCGAGCCCCTCATCCGCCTGTCGGGCGGCGACACTCTTCAGGTGCTAGGCCTCACGTTTTCCGTGCTGGACGTGCC GGGGCATACGGCGGGGCATATCGCCTACTACTGTGCGGACATGGAAGGCGAGCCCCTGCTGTTGTGCGGGGATACGCTGT TCTCAGGTGGATGCGGGCGCTTGTTTGAAGGCACGCCCACGCAAATGCAGGCCTCGCTGGATACGCTGGCTGCATTGCCC GGCAACACCCGCGTATGCTGCGCCCATGAATACACGCTGTCCAACCTGAAGTTCGCCCGCGCGGTGGAACCCCATAACGC TGCGCTACTCCAGTACATCACCGAATGCGAGTCCCGGCGCCGCGCGGATCAGCCCACACTGCCGTCGCGCATTGCCATCG AGCGCGACATCAACCCTTTTCTGCGCACGCGCGTTGCTACGGTAGCCCAAGCCGCCCACGGCTTCGACGCCCTCATAGAC CCGCGCGAACCCGCAGCCGTACTGGCCGCGCTGCGCCAATGGAAAAACGAATTTCGATGA
Upstream 100 bases:
>100_bases GTCCGCCACCAGCTCGTCGTAACGCTCCTGCTCCCAGGCCAGCAGGTAGCGGCCAGGGGCAGTATCGAACCAGTGGTGCA AACCTATAATTTCGCCGGTC
Downstream 100 bases:
>100_bases GACTTCTGCACATCCTGGGGCTGGCAAGCCTGCTGTGGTTGACCGGTTGCGCGACCACTGCCCCTACGGACAACGCCGCA TCCACCACCGACCCCACTAC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKNLLPLPAFADNYIWMLYDAQRAVVVDPGDAEPVLQALRSMGLPLEAILVTHHHGDHVGGVNALREATGATVYGPATEP MPEPLIRLSGGDTLQVLGLTFSVLDVPGHTAGHIAYYCADMEGEPLLLCGDTLFSGGCGRLFEGTPTQMQASLDTLAALP GNTRVCCAHEYTLSNLKFARAVEPHNAALLQYITECESRRRADQPTLPSRIAIERDINPFLRTRVATVAQAAHGFDALID PREPAAVLAALRQWKNEFR
Sequences:
>Translated_259_residues MKNLLPLPAFADNYIWMLYDAQRAVVVDPGDAEPVLQALRSMGLPLEAILVTHHHGDHVGGVNALREATGATVYGPATEP MPEPLIRLSGGDTLQVLGLTFSVLDVPGHTAGHIAYYCADMEGEPLLLCGDTLFSGGCGRLFEGTPTQMQASLDTLAALP GNTRVCCAHEYTLSNLKFARAVEPHNAALLQYITECESRRRADQPTLPSRIAIERDINPFLRTRVATVAQAAHGFDALID PREPAAVLAALRQWKNEFR >Mature_259_residues MKNLLPLPAFADNYIWMLYDAQRAVVVDPGDAEPVLQALRSMGLPLEAILVTHHHGDHVGGVNALREATGATVYGPATEP MPEPLIRLSGGDTLQVLGLTFSVLDVPGHTAGHIAYYCADMEGEPLLLCGDTLFSGGCGRLFEGTPTQMQASLDTLAALP GNTRVCCAHEYTLSNLKFARAVEPHNAALLQYITECESRRRADQPTLPSRIAIERDINPFLRTRVATVAQAAHGFDALID PREPAAVLAALRQWKNEFR
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=259, Percent_Identity=39.7683397683398, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI94538322, Length=259, Percent_Identity=39.7683397683398, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI21703352, Length=237, Percent_Identity=39.2405063291139, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI116642887, Length=237, Percent_Identity=39.2405063291139, Blast_Score=147, Evalue=6e-36, Organism=Homo sapiens, GI14150041, Length=222, Percent_Identity=39.1891891891892, Blast_Score=140, Evalue=9e-34, Organism=Homo sapiens, GI46361987, Length=198, Percent_Identity=37.8787878787879, Blast_Score=117, Evalue=1e-26, Organism=Escherichia coli, GI1786406, Length=258, Percent_Identity=48.8372093023256, Blast_Score=211, Evalue=5e-56, Organism=Escherichia coli, GI1787158, Length=205, Percent_Identity=32.1951219512195, Blast_Score=83, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536925, Length=257, Percent_Identity=34.2412451361868, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6320478, Length=270, Percent_Identity=31.8518518518519, Blast_Score=105, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6324614, Length=269, Percent_Identity=28.996282527881, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI21356335, Length=260, Percent_Identity=40.3846153846154, Blast_Score=185, Evalue=3e-47, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=40.3846153846154, Blast_Score=184, Evalue=3e-47, Organism=Drosophila melanogaster, GI24667703, Length=260, Percent_Identity=40.3846153846154, Blast_Score=184, Evalue=6e-47, Organism=Drosophila melanogaster, GI221330176, Length=169, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28090; Mature: 28090
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00743 BETA_LACTAMASE_B_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLPLPAFADNYIWMLYDAQRAVVVDPGDAEPVLQALRSMGLPLEAILVTHHHGDHVG CCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCC GVNALREATGATVYGPATEPMPEPLIRLSGGDTLQVLGLTFSVLDVPGHTAGHIAYYCAD HHHHHHHHCCCEEECCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCCCCCCEEEEEEEC MEGEPLLLCGDTLFSGGCGRLFEGTPTQMQASLDTLAALPGNTRVCCAHEYTLSNLKFAR CCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCHHH AVEPHNAALLQYITECESRRRADQPTLPSRIAIERDINPFLRTRVATVAQAAHGFDALID HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHCC PREPAAVLAALRQWKNEFR CCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNLLPLPAFADNYIWMLYDAQRAVVVDPGDAEPVLQALRSMGLPLEAILVTHHHGDHVG CCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCC GVNALREATGATVYGPATEPMPEPLIRLSGGDTLQVLGLTFSVLDVPGHTAGHIAYYCAD HHHHHHHHCCCEEECCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCCCCCCEEEEEEEC MEGEPLLLCGDTLFSGGCGRLFEGTPTQMQASLDTLAALPGNTRVCCAHEYTLSNLKFAR CCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCHHH AVEPHNAALLQYITECESRRRADQPTLPSRIAIERDINPFLRTRVATVAQAAHGFDALID HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHCC PREPAAVLAALRQWKNEFR CCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA