Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 222111137

GI number: 222111137

Start: 2080642

End: 2081916

Strand: Direct

Name: yngJ [H]

Synonym: Dtpsy_1945

Alternate gene names: 222111137

Gene position: 2080642-2081916 (Clockwise)

Preceding gene: 222111136

Following gene: 222111138

Centisome position: 54.8

GC content: 65.73

Gene sequence:

>1275_bases
ATGGACTTCGATTACTCGCCCAAGACCAAGGAACTGCAGGCGCGCCTGATCCAGTTCATGGACGACCACATCTACCCCGC
CGAGAAGGCCTATGCCGAGGAGATGGCGGCCAACACGGCCGCAGGCAGGCGCTGGACACCACTGCAAACCATCGAAAACC
TGAAACCCAAGGCGCAGGCCGCGGGGCTGTGGAACCTGTTCCTGCCGGTGGACACCGCCCAAGCATCGGGCTACGAAGGC
GCCGGGTTGACCAACGCCGAGTACGCGCCGCTGGCGGAGATCATGGGCCGCGTGCTGTGGTCCAGCGAGGTGTTCAACTG
CTCGGCCCCCGACACGGGCAACATGGAGACCATCGCGCGTTATGGGTCCGAGGCCATCAAGGCCCAGTGGCTCAAGCCGC
TGCTGGAAGGGCGCATGCGCTCGGCCTTTGCCATGACCGAACCCGATGTCGCCTCCAGCGACGCCACCAACATCGAAACG
CGCATCGAGCGCCAGGGCGACCATTACGTGATCAATGGGCGCAAGTGGTGGACCAGCGGCGCCAACGACCCGCGCTGCAA
GGTGTTCATCACCATGGGCAAGACCGACCCCGAGGCGCCCAAGCACTCGCAACAAAGCATGATCGTCGTGCCAGCCGATA
CGCCAGGCATCACGGTGGTGCGTGCACTCAACGTGTTCGGTTATGACGATGCGCCGCACGGCCACGCCGAAGTCCTCTTC
GAGAACGTGCGCGTACCGGTGGACAACATCCTGCTGGGCGAAGGCCGTGGGTTCGAGATCGCCCAGGGACGCCTGGGCCC
CGGGCGCATCCACCACTGCATGCGCCTGATCGGCCAGGCCGAGCGCGCGCTGGAACTGATGTGCCGCCGCGCCAGCAGCC
GGGTGGCCTTCGGCAAGACGCTGGCACAACAGAGCGTGACCCAGGAACGCATTGCCGAAGCCCGCTGCAAGATCGACATG
GCGCGCCTGCTCACGCTCAAGGCCGCCTGGATGATGGACACCGTGGGCAACAAGGTCGCCAAGACCGAGATCGCCATGAT
CAAGGTCGTCGCCCCCAGCATGGCCTGCCAGGTGATCGACTGGGCCATGCAGGTGCATGGCGGCGGCGGCGTGAGCGACG
ATTTCCCGCTGGCCTACGCCTATGCCAACGCGCGCACCCTGCGCTTCGCCGACGGCCCGGATGAGGTGCACCGCAACGCC
ATTGCCAAATGGGAACTGGGCAAATACGGCACCTACGGGCGTGGTGCGGCGCAACCGGTCACCCGCGGCGCTTGA

Upstream 100 bases:

>100_bases
GCCAAGGCCGCTGGCGCCACCGCACAGCCCATGGCGCAGCTGGCCTGGTCCTTCGCGCAAAAGAGTTGATCCCCCTTCCC
CACTGACGAGAAAGCACCCC

Downstream 100 bases:

>100_bases
GCGCAGCGGGACCTTGCTCCGCAGTTGAAGATCCGGTCCCGGCCTGGCCTACCCATTGGGGTGGCTAGGCCGCAAGTTTT
TATCAGCCTGCGTTCAAGTC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MDFDYSPKTKELQARLIQFMDDHIYPAEKAYAEEMAANTAAGRRWTPLQTIENLKPKAQAAGLWNLFLPVDTAQASGYEG
AGLTNAEYAPLAEIMGRVLWSSEVFNCSAPDTGNMETIARYGSEAIKAQWLKPLLEGRMRSAFAMTEPDVASSDATNIET
RIERQGDHYVINGRKWWTSGANDPRCKVFITMGKTDPEAPKHSQQSMIVVPADTPGITVVRALNVFGYDDAPHGHAEVLF
ENVRVPVDNILLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALELMCRRASSRVAFGKTLAQQSVTQERIAEARCKIDM
ARLLTLKAAWMMDTVGNKVAKTEIAMIKVVAPSMACQVIDWAMQVHGGGGVSDDFPLAYAYANARTLRFADGPDEVHRNA
IAKWELGKYGTYGRGAAQPVTRGA

Sequences:

>Translated_424_residues
MDFDYSPKTKELQARLIQFMDDHIYPAEKAYAEEMAANTAAGRRWTPLQTIENLKPKAQAAGLWNLFLPVDTAQASGYEG
AGLTNAEYAPLAEIMGRVLWSSEVFNCSAPDTGNMETIARYGSEAIKAQWLKPLLEGRMRSAFAMTEPDVASSDATNIET
RIERQGDHYVINGRKWWTSGANDPRCKVFITMGKTDPEAPKHSQQSMIVVPADTPGITVVRALNVFGYDDAPHGHAEVLF
ENVRVPVDNILLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALELMCRRASSRVAFGKTLAQQSVTQERIAEARCKIDM
ARLLTLKAAWMMDTVGNKVAKTEIAMIKVVAPSMACQVIDWAMQVHGGGGVSDDFPLAYAYANARTLRFADGPDEVHRNA
IAKWELGKYGTYGRGAAQPVTRGA
>Mature_424_residues
MDFDYSPKTKELQARLIQFMDDHIYPAEKAYAEEMAANTAAGRRWTPLQTIENLKPKAQAAGLWNLFLPVDTAQASGYEG
AGLTNAEYAPLAEIMGRVLWSSEVFNCSAPDTGNMETIARYGSEAIKAQWLKPLLEGRMRSAFAMTEPDVASSDATNIET
RIERQGDHYVINGRKWWTSGANDPRCKVFITMGKTDPEAPKHSQQSMIVVPADTPGITVVRALNVFGYDDAPHGHAEVLF
ENVRVPVDNILLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALELMCRRASSRVAFGKTLAQQSVTQERIAEARCKIDM
ARLLTLKAAWMMDTVGNKVAKTEIAMIKVVAPSMACQVIDWAMQVHGGGGVSDDFPLAYAYANARTLRFADGPDEVHRNA
IAKWELGKYGTYGRGAAQPVTRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=401, Percent_Identity=60.3491271820449, Blast_Score=495, Evalue=1e-140,
Organism=Homo sapiens, GI48976061, Length=401, Percent_Identity=60.3491271820449, Blast_Score=495, Evalue=1e-140,
Organism=Homo sapiens, GI38505218, Length=406, Percent_Identity=54.1871921182266, Blast_Score=449, Evalue=1e-126,
Organism=Homo sapiens, GI4557231, Length=417, Percent_Identity=27.5779376498801, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI187960098, Length=417, Percent_Identity=27.5779376498801, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI21361497, Length=388, Percent_Identity=29.1237113402062, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI4557233, Length=359, Percent_Identity=32.3119777158774, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI4501859, Length=391, Percent_Identity=28.6445012787724, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=27.7333333333333, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI226958412, Length=401, Percent_Identity=25.1870324189526, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI226958414, Length=329, Percent_Identity=27.355623100304, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI4501857, Length=313, Percent_Identity=27.4760383386581, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI76496475, Length=408, Percent_Identity=26.2254901960784, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI4557235, Length=408, Percent_Identity=26.2254901960784, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI4503943, Length=326, Percent_Identity=24.2331288343558, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI7669494, Length=304, Percent_Identity=25, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI87081958, Length=313, Percent_Identity=29.073482428115, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1786223, Length=298, Percent_Identity=26.1744966442953, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17562446, Length=365, Percent_Identity=55.8904109589041, Blast_Score=416, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI17534899, Length=411, Percent_Identity=27.007299270073, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17569725, Length=422, Percent_Identity=27.0142180094787, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71985184, Length=332, Percent_Identity=31.0240963855422, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17570075, Length=422, Percent_Identity=25.3554502369668, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17533517, Length=290, Percent_Identity=30.6896551724138, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17538396, Length=289, Percent_Identity=27.3356401384083, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17551932, Length=346, Percent_Identity=26.878612716763, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=296, Percent_Identity=31.0810810810811, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17505929, Length=328, Percent_Identity=27.1341463414634, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71985192, Length=245, Percent_Identity=31.0204081632653, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=326, Percent_Identity=26.6871165644172, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=214, Percent_Identity=29.4392523364486, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17534353, Length=323, Percent_Identity=24.7678018575851, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=189, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24646207, Length=361, Percent_Identity=32.1329639889197, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI21356377, Length=332, Percent_Identity=30.421686746988, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24660351, Length=283, Percent_Identity=30.3886925795053, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281363737, Length=331, Percent_Identity=29.9093655589124, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24666513, Length=288, Percent_Identity=31.9444444444444, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI21355753, Length=296, Percent_Identity=25.6756756756757, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19920834, Length=328, Percent_Identity=25, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46605; Mature: 46605

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDYSPKTKELQARLIQFMDDHIYPAEKAYAEEMAANTAAGRRWTPLQTIENLKPKAQA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHH
AGLWNLFLPVDTAQASGYEGAGLTNAEYAPLAEIMGRVLWSSEVFNCSAPDTGNMETIAR
CCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHH
YGSEAIKAQWLKPLLEGRMRSAFAMTEPDVASSDATNIETRIERQGDHYVINGRKWWTSG
HCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCEEEECCC
ANDPRCKVFITMGKTDPEAPKHSQQSMIVVPADTPGITVVRALNVFGYDDAPHGHAEVLF
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHCCCCCCCCCHHHHHH
ENVRVPVDNILLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALELMCRRASSRVAFGKT
HHCCCCHHHEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LAQQSVTQERIAEARCKIDMARLLTLKAAWMMDTVGNKVAKTEIAMIKVVAPSMACQVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECHHHHHHHHH
WAMQVHGGGGVSDDFPLAYAYANARTLRFADGPDEVHRNAIAKWELGKYGTYGRGAAQPV
HHHHCCCCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TRGA
CCCC
>Mature Secondary Structure
MDFDYSPKTKELQARLIQFMDDHIYPAEKAYAEEMAANTAAGRRWTPLQTIENLKPKAQA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHH
AGLWNLFLPVDTAQASGYEGAGLTNAEYAPLAEIMGRVLWSSEVFNCSAPDTGNMETIAR
CCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHH
YGSEAIKAQWLKPLLEGRMRSAFAMTEPDVASSDATNIETRIERQGDHYVINGRKWWTSG
HCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCEEEECCC
ANDPRCKVFITMGKTDPEAPKHSQQSMIVVPADTPGITVVRALNVFGYDDAPHGHAEVLF
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHCCCCCCCCCHHHHHH
ENVRVPVDNILLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALELMCRRASSRVAFGKT
HHCCCCHHHEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LAQQSVTQERIAEARCKIDMARLLTLKAAWMMDTVGNKVAKTEIAMIKVVAPSMACQVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECHHHHHHHHH
WAMQVHGGGGVSDDFPLAYAYANARTLRFADGPDEVHRNAIAKWELGKYGTYGRGAAQPV
HHHHCCCCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TRGA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]