| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110990
Identifier: 222110990
GI number: 222110990
Start: 1913539
End: 1914543
Strand: Direct
Name: 222110990
Synonym: Dtpsy_1797
Alternate gene names: NA
Gene position: 1913539-1914543 (Clockwise)
Preceding gene: 222110989
Following gene: 222110991
Centisome position: 50.4
GC content: 67.16
Gene sequence:
>1005_bases ATGCAACGCCGCACCTTGATCAAAAGCTCCCTCGCCGCCGCCAGCGCCTTGCTGCTGGGCAGCGCATTGACCCCCTTGCC TGCAGCAGCGCAGGGCAATTGGCCCGCGGGCAAGGCCATCACCTACCTGGTGCCCTTTCCACCCGGCGGTAATACCGACA CGCTGGCTCGCGTGGTAGCCCAGCCTCTGGGCCAGGCCCTGGGCACACCCGTGGTCATTGACAACAAGGGCGGCGCGGGC GGCAGCGTGGGATCGGCCATCGCCGCGCGCGCGCCCGCCGACGGCTACACCATCCTTGGCGGCACCATCAGCTCGCACGC CATCAACGTGAGTCTGTACCCCAAGCTGGACTACGACCCCGTCAAGTCCTTCACGCCGATTGCCATGCTGGGCTCTGGTC CGCTGGTGCTGGTGGTGCCCGCCGCCAGCCCGTACAAGACGCTTGCGGAAGTGCTCGCCGCCAGCAAGGCCAAGGTCGCG GCGGGCGGCCTGTCCTCGGCGTCGCCCGGCAGCGGCACCTCCAACCACATGGCGCTGGAGCTGCTGGCCTATCAGACGGG CGTGAAGTTCACGCATGTGCCGTACAAGGGCAGCGGCCCTGCGGTCCAGGACGTGATCGGTGGCCAAGTGGACATGATGT TCGACACCGCGCTGGTCGTAGGCCCGCACATCCAGTCGGGCAAGCTGCGCCCCATCGCCGTGACCAGCTCCAAACGCGTG GAGTCGCTGCCCGACGTGCCCACCATTGCCGAAGCCGGAGAAAAAGGCTTCGACATGGGCTCCTGGCAGGCCGTGTTCGC GCCCGCCGGCACACCCAAGCCCATCGTGGACCGACTGCACGCCGAGATCATGAAGATCGTCGCCACCCCGGAAGTCCAGG CGCGCCTCAAAGCCTTCGGCATGGTGCCATCCACCATGACGCCCGCCGAACTGGCCACATTCCAGAAGGCCGAGGTGGCC AAGTGGGCGCAGGTGATCAAGGCCGCAGGCATAAAGGCGGAATGA
Upstream 100 bases:
>100_bases AACCGCGACGACCTCGGGCAGATGCGCAAGTACGACCCCGGCTTCACCGGCCGCCAGCCACGTTTCTGAGTCCTTTCCAT CCAACCAGGAGACATCCCCC
Downstream 100 bases:
>100_bases CCCCTGAGCGGCCGCACGCCTTCCGCTAACGGAGATGCCGCCCCGTTGCCGGGTAGCCCTTGCACGGCAAACCGGTTGCA GGCGTCAGCTCCGCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MQRRTLIKSSLAAASALLLGSALTPLPAAAQGNWPAGKAITYLVPFPPGGNTDTLARVVAQPLGQALGTPVVIDNKGGAG GSVGSAIAARAPADGYTILGGTISSHAINVSLYPKLDYDPVKSFTPIAMLGSGPLVLVVPAASPYKTLAEVLAASKAKVA AGGLSSASPGSGTSNHMALELLAYQTGVKFTHVPYKGSGPAVQDVIGGQVDMMFDTALVVGPHIQSGKLRPIAVTSSKRV ESLPDVPTIAEAGEKGFDMGSWQAVFAPAGTPKPIVDRLHAEIMKIVATPEVQARLKAFGMVPSTMTPAELATFQKAEVA KWAQVIKAAGIKAE
Sequences:
>Translated_334_residues MQRRTLIKSSLAAASALLLGSALTPLPAAAQGNWPAGKAITYLVPFPPGGNTDTLARVVAQPLGQALGTPVVIDNKGGAG GSVGSAIAARAPADGYTILGGTISSHAINVSLYPKLDYDPVKSFTPIAMLGSGPLVLVVPAASPYKTLAEVLAASKAKVA AGGLSSASPGSGTSNHMALELLAYQTGVKFTHVPYKGSGPAVQDVIGGQVDMMFDTALVVGPHIQSGKLRPIAVTSSKRV ESLPDVPTIAEAGEKGFDMGSWQAVFAPAGTPKPIVDRLHAEIMKIVATPEVQARLKAFGMVPSTMTPAELATFQKAEVA KWAQVIKAAGIKAE >Mature_334_residues MQRRTLIKSSLAAASALLLGSALTPLPAAAQGNWPAGKAITYLVPFPPGGNTDTLARVVAQPLGQALGTPVVIDNKGGAG GSVGSAIAARAPADGYTILGGTISSHAINVSLYPKLDYDPVKSFTPIAMLGSGPLVLVVPAASPYKTLAEVLAASKAKVA AGGLSSASPGSGTSNHMALELLAYQTGVKFTHVPYKGSGPAVQDVIGGQVDMMFDTALVVGPHIQSGKLRPIAVTSSKRV ESLPDVPTIAEAGEKGFDMGSWQAVFAPAGTPKPIVDRLHAEIMKIVATPEVQARLKAFGMVPSTMTPAELATFQKAEVA KWAQVIKAAGIKAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34076; Mature: 34076
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRTLIKSSLAAASALLLGSALTPLPAAAQGNWPAGKAITYLVPFPPGGNTDTLARVVA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH QPLGQALGTPVVIDNKGGAGGSVGSAIAARAPADGYTILGGTISSHAINVSLYPKLDYDP HHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCCC VKSFTPIAMLGSGPLVLVVPAASPYKTLAEVLAASKAKVAAGGLSSASPGSGTSNHMALE CCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHEEE LLAYQTGVKFTHVPYKGSGPAVQDVIGGQVDMMFDTALVVGPHIQSGKLRPIAVTSSKRV EEEHHCCCEEEECCCCCCCCHHHHHHCCCEEEEEHEEEEECCCCCCCCEEEEEECCCHHH ESLPDVPTIAEAGEKGFDMGSWQAVFAPAGTPKPIVDRLHAEIMKIVATPEVQARLKAFG HCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC MVPSTMTPAELATFQKAEVAKWAQVIKAAGIKAE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQRRTLIKSSLAAASALLLGSALTPLPAAAQGNWPAGKAITYLVPFPPGGNTDTLARVVA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH QPLGQALGTPVVIDNKGGAGGSVGSAIAARAPADGYTILGGTISSHAINVSLYPKLDYDP HHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCCC VKSFTPIAMLGSGPLVLVVPAASPYKTLAEVLAASKAKVAAGGLSSASPGSGTSNHMALE CCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHEEE LLAYQTGVKFTHVPYKGSGPAVQDVIGGQVDMMFDTALVVGPHIQSGKLRPIAVTSSKRV EEEHHCCCEEEECCCCCCCCHHHHHHCCCEEEEEHEEEEECCCCCCCCEEEEEECCCHHH ESLPDVPTIAEAGEKGFDMGSWQAVFAPAGTPKPIVDRLHAEIMKIVATPEVQARLKAFG HCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC MVPSTMTPAELATFQKAEVAKWAQVIKAAGIKAE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]