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The map label for this gene is yebC [C]

Identifier: 222110896

GI number: 222110896

Start: 1809492

End: 1810211

Strand: Direct

Name: yebC [C]

Synonym: Dtpsy_1703

Alternate gene names: 222110896

Gene position: 1809492-1810211 (Clockwise)

Preceding gene: 222110893

Following gene: 222110897

Centisome position: 47.66

GC content: 65.14

Gene sequence:

>720_bases
GTGGCAGGACACAGTAAATGGGCCAACATCCAGCACCGCAAGGGGCGCCAGGATGAAAAGCGCGGAAAGATCTGGACCCG
CATCATTCGTGAAATCACCGTCGCGGCGCGCACGGGCGGCGGCGACCCCTCGGCCAACCCGCGTCTGCGCCTGGCCATCG
ACAAGGCCAAGGCCGCCAACATGCCGGCCGACCGCATCAAGTACAACATCGACAAGGCCTCGGGCACGCTGGAAGGCGTG
AGCTACGAGGAAATCCGCTACGAGGGCTACGGCATCGGCGGCGCCGCGATCATCGTGGACACCATGACCGACAACCGCGT
GCGCACCGTGGCTGAAGTGCGCCACGCCTTCAGCAAGTACGGCGGCAACATGGGCACGGAAGGCTCCGTGGCCTTTCAGT
TCAAGAACGTGGGCCAGATCATCTTCGCCCCCGGCACCAGCGAGGACAAGGTCATGGAAGTGGCCCTGGAGGCGGGCGCC
GAGGACGTGATCACCGATGATGAGGGCGCCATCGAGGTGCTGACCGCGCCCGGCGATTTCGAGGCGGTGCGCGATGCGCT
GGGGGCTGCGGGCCTTCAGCCGGAGGTGGCCGAGGTCACCATGCGCCCCGAGAACACCATCGCCCTGGAGGGCGACGATG
TCGCGCGCATGCAAAAGCTCCTGGACATGATCGAAGACCTCGACGATGTGCAAGAGGTCTACCACAACGCAGAGCTCTAG

Upstream 100 bases:

>100_bases
ACGCTGTGCAATCAGGAGAGGTTCGGACATGGCGGTAGTGATGGGGTGAGTCAAAAGTAAAATCGCGGCCGCAAGATTAA
ATCAATCAAAGGACGCTGCA

Downstream 100 bases:

>100_bases
GAACTTGAGCACCGACACCCTATGAAAATCCTAGTCATTGGCGGCGGCGGCCGGGAACACGCACTGGCCTGGAAGCTGAG
CCAGTCCCCCAAGACCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARTGGGDPSANPRLRLAIDKAKAANMPADRIKYNIDKASGTLEGV
SYEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFSKYGGNMGTEGSVAFQFKNVGQIIFAPGTSEDKVMEVALEAGA
EDVITDDEGAIEVLTAPGDFEAVRDALGAAGLQPEVAEVTMRPENTIALEGDDVARMQKLLDMIEDLDDVQEVYHNAEL

Sequences:

>Translated_239_residues
MAGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARTGGGDPSANPRLRLAIDKAKAANMPADRIKYNIDKASGTLEGV
SYEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFSKYGGNMGTEGSVAFQFKNVGQIIFAPGTSEDKVMEVALEAGA
EDVITDDEGAIEVLTAPGDFEAVRDALGAAGLQPEVAEVTMRPENTIALEGDDVARMQKLLDMIEDLDDVQEVYHNAEL
>Mature_238_residues
AGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARTGGGDPSANPRLRLAIDKAKAANMPADRIKYNIDKASGTLEGVS
YEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFSKYGGNMGTEGSVAFQFKNVGQIIFAPGTSEDKVMEVALEAGAE
DVITDDEGAIEVLTAPGDFEAVRDALGAAGLQPEVAEVTMRPENTIALEGDDVARMQKLLDMIEDLDDVQEVYHNAEL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=27.710843373494, Blast_Score=105, Evalue=4e-23,
Organism=Escherichia coli, GI1788171, Length=239, Percent_Identity=56.9037656903766, Blast_Score=270, Evalue=9e-74,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=41.025641025641, Blast_Score=157, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.2295081967213, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=32.1969696969697, Blast_Score=118, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=27.710843373494, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1898_ACISJ (A1W753)

Other databases:

- EMBL:   CP000539
- RefSeq:   YP_986154.1
- ProteinModelPortal:   A1W753
- SMR:   A1W753
- STRING:   A1W753
- GeneID:   4671666
- GenomeReviews:   CP000539_GR
- KEGG:   ajs:Ajs_1898
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   A1W753
- ProtClustDB:   PRK00110
- BioCyc:   ASP232721:AJS_1898-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 25976; Mature: 25845

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARTGGGDPSANPRLRLAIDKAKAAN
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHCC
MPADRIKYNIDKASGTLEGVSYEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFSKY
CCHHHHEEEECCCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GGNMGTEGSVAFQFKNVGQIIFAPGTSEDKVMEVALEAGAEDVITDDEGAIEVLTAPGDF
CCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCEECCCCCEEEEECCCCH
EAVRDALGAAGLQPEVAEVTMRPENTIALEGDDVARMQKLLDMIEDLDDVQEVYHNAEL
HHHHHHHHCCCCCCCHHEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARTGGGDPSANPRLRLAIDKAKAAN
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHCC
MPADRIKYNIDKASGTLEGVSYEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFSKY
CCHHHHEEEECCCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GGNMGTEGSVAFQFKNVGQIIFAPGTSEDKVMEVALEAGAEDVITDDEGAIEVLTAPGDF
CCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCEECCCCCEEEEECCCCH
EAVRDALGAAGLQPEVAEVTMRPENTIALEGDDVARMQKLLDMIEDLDDVQEVYHNAEL
HHHHHHHHCCCCCCCHHEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA