| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110561
Identifier: 222110561
GI number: 222110561
Start: 1422927
End: 1423601
Strand: Direct
Name: 222110561
Synonym: Dtpsy_1361
Alternate gene names: NA
Gene position: 1422927-1423601 (Clockwise)
Preceding gene: 222110560
Following gene: 222110565
Centisome position: 37.48
GC content: 72.44
Gene sequence:
>675_bases ATGCACGCCACCGTGTCCTGTCCGCGCCAGCGTTTGCGCGTCTTTTCTGCGGCGGGCTTGTGCTTCGCCCTGGCCACCGC TGGCCTGCTGGCGCTGCCCGCCACGCCCGCGGGCGCGCGCGACGCGTCCACCGCCTGGGGCAAGCGCCTGGTGGAGTCGT TCGAATTGACGCCCGAAGACCTGGCGCGACTGGCGCGCCACCAAGACAAGACGGCCGGCAGCAAGCCCGCGGGCTTTTTC TCCGAAACGGTGGCCTGGAAGGCGCCGCGCGCGCTGGACCTGCCCGCCAGCGGCAACCCCTACACGCTGGTGGTGCACGT GGCCGGCGTGGCCCAGGCCGACGGCGAGGGTCTCACGCGCTGGATGGCCGGCTGGGACACGGACAACGGCACGCGCCTGT CGATGGTGCAGGGCGCTTCGTTCGGGACGGGCACGCGCGCGGGCCAGGTGCTGCAGCTGGCGGGCACGGCCGGGCCGGTG AGCTTCAAGGAGGACCGCAAGGTGGCGCCGGCGCTGGAGTTCGCAGGCGCGAGCAACCTGCGGCTGGACGGCGTGCGCGT GGAGGTGTGGTCCGGCATGCGGCGCAGCTCGTTCGTCGAGCTGCTCATGTCCGCCGTGCCGCTACTCACGGGTGTGGTGT TCCTCGCGCTGGTCGTCTGGTGGCGCAAGCGCTAG
Upstream 100 bases:
>100_bases AAACCGCTCTAGCGCCCGTCCATCAAGCGCTTGCAGCTATTAAAATCGATGCAAACGGTGCCATTCGCAGCACCGCACAG CCACCCGAGGGAGCCCCCAC
Downstream 100 bases:
>100_bases CGCCGCGCGGCGCACTGCACACCGTGCAGGCCGCCCGTGGCGCTGGCGGGCGCGTGCCGCGCTAGAAGCCCAGCGGCTGG CCGGGCTTCCAGGCGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MHATVSCPRQRLRVFSAAGLCFALATAGLLALPATPAGARDASTAWGKRLVESFELTPEDLARLARHQDKTAGSKPAGFF SETVAWKAPRALDLPASGNPYTLVVHVAGVAQADGEGLTRWMAGWDTDNGTRLSMVQGASFGTGTRAGQVLQLAGTAGPV SFKEDRKVAPALEFAGASNLRLDGVRVEVWSGMRRSSFVELLMSAVPLLTGVVFLALVVWWRKR
Sequences:
>Translated_224_residues MHATVSCPRQRLRVFSAAGLCFALATAGLLALPATPAGARDASTAWGKRLVESFELTPEDLARLARHQDKTAGSKPAGFF SETVAWKAPRALDLPASGNPYTLVVHVAGVAQADGEGLTRWMAGWDTDNGTRLSMVQGASFGTGTRAGQVLQLAGTAGPV SFKEDRKVAPALEFAGASNLRLDGVRVEVWSGMRRSSFVELLMSAVPLLTGVVFLALVVWWRKR >Mature_224_residues MHATVSCPRQRLRVFSAAGLCFALATAGLLALPATPAGARDASTAWGKRLVESFELTPEDLARLARHQDKTAGSKPAGFF SETVAWKAPRALDLPASGNPYTLVVHVAGVAQADGEGLTRWMAGWDTDNGTRLSMVQGASFGTGTRAGQVLQLAGTAGPV SFKEDRKVAPALEFAGASNLRLDGVRVEVWSGMRRSSFVELLMSAVPLLTGVVFLALVVWWRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23835; Mature: 23835
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHATVSCPRQRLRVFSAAGLCFALATAGLLALPATPAGARDASTAWGKRLVESFELTPED CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH LARLARHQDKTAGSKPAGFFSETVAWKAPRALDLPASGNPYTLVVHVAGVAQADGEGLTR HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCCCCCHHHH WMAGWDTDNGTRLSMVQGASFGTGTRAGQVLQLAGTAGPVSFKEDRKVAPALEFAGASNL HHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCC RLDGVRVEVWSGMRRSSFVELLMSAVPLLTGVVFLALVVWWRKR EECCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHATVSCPRQRLRVFSAAGLCFALATAGLLALPATPAGARDASTAWGKRLVESFELTPED CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH LARLARHQDKTAGSKPAGFFSETVAWKAPRALDLPASGNPYTLVVHVAGVAQADGEGLTR HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCCCCCHHHH WMAGWDTDNGTRLSMVQGASFGTGTRAGQVLQLAGTAGPVSFKEDRKVAPALEFAGASNL HHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCC RLDGVRVEVWSGMRRSSFVELLMSAVPLLTGVVFLALVVWWRKR EECCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA