| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110470
Identifier: 222110470
GI number: 222110470
Start: 1328466
End: 1329092
Strand: Direct
Name: 222110470
Synonym: Dtpsy_1267
Alternate gene names: NA
Gene position: 1328466-1329092 (Clockwise)
Preceding gene: 222110469
Following gene: 222110471
Centisome position: 34.99
GC content: 55.18
Gene sequence:
>627_bases ATGACACGCATTCACTCCTATGTCGTGCGGTACGACAGTGGTTTTGCGCCCAACCCCTTCTACAGCTACTGCACGCTCGC GACTTGCAAGCCCAGTATTCGAAGAAGCGCTGACATCGGTGATTGGGTGGTCGGCAGCGGAAGCAATGATCGAAGTGTTC GACGCGGTGGGCATCTGGTCTATGCGATGCGGGTCACCGAGGCAATGACATTTGATGAGTACGGCCGAGACCCGCGGTTT GAATCCAAGAAGCCGTACCGCAATGGCAGTCGGAAGCAAAGTTGTGGGGACAATATTTATTTCAGGGCTGCGGCTGGGGT TGCTTGGCAGCAGCGAGACTCATTTCACTCCCGCCCCGATGGCTCGCTCAACCCTGACCATGTGGCCCGTGATACAGGCG TCAACAGGGTTCTGATCAGCAACGATTTCGTATATTTCGGGGGTGAGGGCCCTGCGTTTCCTGATGAATTGCAAGATCAG CAAGGTCGCCCTCTATGCAAAACGGGAATAGGCCTCACGGCCTTTGACGATGCGCAATTAGTTGGAAATCTTGAGCAATG GATTCGCAACTTGGCAGTGAGCGGCTACCAAGGCGCCCCATTCGAATGGCTGACTCTTCGCAGGTGA
Upstream 100 bases:
>100_bases ACGGTGATTCAATCATTGACGCGATCAACGGCAAGGATTCGTGGGAAAAGCCTGACGGCGGTGCCTGTGATCCGGTTTCA CTCAAGCGGCATCCCTGCTG
Downstream 100 bases:
>100_bases CCGATGAAAAAGGAAGGCTCCCTCTTGCTCTCAGATTACGCTGCAGGAATTGCAGCCACGGACGTACTCAATCCGAACGA CTTCAATCCGGTTCTCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTRIHSYVVRYDSGFAPNPFYSYCTLATCKPSIRRSADIGDWVVGSGSNDRSVRRGGHLVYAMRVTEAMTFDEYGRDPRF ESKKPYRNGSRKQSCGDNIYFRAAAGVAWQQRDSFHSRPDGSLNPDHVARDTGVNRVLISNDFVYFGGEGPAFPDELQDQ QGRPLCKTGIGLTAFDDAQLVGNLEQWIRNLAVSGYQGAPFEWLTLRR
Sequences:
>Translated_208_residues MTRIHSYVVRYDSGFAPNPFYSYCTLATCKPSIRRSADIGDWVVGSGSNDRSVRRGGHLVYAMRVTEAMTFDEYGRDPRF ESKKPYRNGSRKQSCGDNIYFRAAAGVAWQQRDSFHSRPDGSLNPDHVARDTGVNRVLISNDFVYFGGEGPAFPDELQDQ QGRPLCKTGIGLTAFDDAQLVGNLEQWIRNLAVSGYQGAPFEWLTLRR >Mature_207_residues TRIHSYVVRYDSGFAPNPFYSYCTLATCKPSIRRSADIGDWVVGSGSNDRSVRRGGHLVYAMRVTEAMTFDEYGRDPRFE SKKPYRNGSRKQSCGDNIYFRAAAGVAWQQRDSFHSRPDGSLNPDHVARDTGVNRVLISNDFVYFGGEGPAFPDELQDQQ GRPLCKTGIGLTAFDDAQLVGNLEQWIRNLAVSGYQGAPFEWLTLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23388; Mature: 23257
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIHSYVVRYDSGFAPNPFYSYCTLATCKPSIRRSADIGDWVVGSGSNDRSVRRGGHLV CCCCEEEEEEECCCCCCCCCHHHEEEECCCHHHHCCCCCCCEEEECCCCCCHHHCCCCEE YAMRVTEAMTFDEYGRDPRFESKKPYRNGSRKQSCGDNIYFRAAAGVAWQQRDSFHSRPD EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCC GSLNPDHVARDTGVNRVLISNDFVYFGGEGPAFPDELQDQQGRPLCKTGIGLTAFDDAQL CCCCHHHHHHHCCCCEEEEECCEEEECCCCCCCCHHHHHCCCCCHHHHCCCEEEECCHHH VGNLEQWIRNLAVSGYQGAPFEWLTLRR HHHHHHHHHHHHCCCCCCCCEEEEEECC >Mature Secondary Structure TRIHSYVVRYDSGFAPNPFYSYCTLATCKPSIRRSADIGDWVVGSGSNDRSVRRGGHLV CCCEEEEEEECCCCCCCCCHHHEEEECCCHHHHCCCCCCCEEEECCCCCCHHHCCCCEE YAMRVTEAMTFDEYGRDPRFESKKPYRNGSRKQSCGDNIYFRAAAGVAWQQRDSFHSRPD EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCC GSLNPDHVARDTGVNRVLISNDFVYFGGEGPAFPDELQDQQGRPLCKTGIGLTAFDDAQL CCCCHHHHHHHCCCCEEEEECCEEEECCCCCCCCHHHHHCCCCCHHHHCCCEEEECCHHH VGNLEQWIRNLAVSGYQGAPFEWLTLRR HHHHHHHHHHHHCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA