| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110469
Identifier: 222110469
GI number: 222110469
Start: 1327999
End: 1328466
Strand: Direct
Name: 222110469
Synonym: Dtpsy_1266
Alternate gene names: NA
Gene position: 1327999-1328466 (Clockwise)
Preceding gene: 222110467
Following gene: 222110470
Centisome position: 34.98
GC content: 52.99
Gene sequence:
>468_bases GTGGCAGACAAAAGGAATGTATTCATCAGCCATGTCCATAAGGACGATCATGGGCTCCAGAAGCTCAAGGATTTGTTGGC GCCGAAAGGGGTGGAAGTCCGGGATTCCTCCATCCACACAGGAAAATTCAACAATGCCACTGATGAGCACTACATCAAGA CGCAGATCCTTGCGCCTGCCATCAATTGGGCTGGGGTGTTCATTTGCTACGTCTCACCCCAAACCAAGAACAGCGATTGG GTGAACTGGGAAATCGAATATGCGGCCAAACAAGGCAAGCGCATCGTTGGTGTTTGGGAGCACGGCGAAAAGGAATGCGA CCTGCCGGATGCGCTAAAAGAACATGCGGACGCCTTGGTTGGGTGGAACGGTGATTCAATCATTGACGCGATCAACGGCA AGGATTCGTGGGAAAAGCCTGACGGCGGTGCCTGTGATCCGGTTTCACTCAAGCGGCATCCCTGCTGA
Upstream 100 bases:
>100_bases CCGGCAGCGGTTCGACCTCACGCTGGCCAGGAGCCCCTACCACGCCGGCGGTAAACCCGGTTACGATCCATCAAAACATG CGAAACCATGGAGGTGACAG
Downstream 100 bases:
>100_bases TGACACGCATTCACTCCTATGTCGTGCGGTACGACAGTGGTTTTGCGCCCAACCCCTTCTACAGCTACTGCACGCTCGCG ACTTGCAAGCCCAGTATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MADKRNVFISHVHKDDHGLQKLKDLLAPKGVEVRDSSIHTGKFNNATDEHYIKTQILAPAINWAGVFICYVSPQTKNSDW VNWEIEYAAKQGKRIVGVWEHGEKECDLPDALKEHADALVGWNGDSIIDAINGKDSWEKPDGGACDPVSLKRHPC
Sequences:
>Translated_155_residues MADKRNVFISHVHKDDHGLQKLKDLLAPKGVEVRDSSIHTGKFNNATDEHYIKTQILAPAINWAGVFICYVSPQTKNSDW VNWEIEYAAKQGKRIVGVWEHGEKECDLPDALKEHADALVGWNGDSIIDAINGKDSWEKPDGGACDPVSLKRHPC >Mature_154_residues ADKRNVFISHVHKDDHGLQKLKDLLAPKGVEVRDSSIHTGKFNNATDEHYIKTQILAPAINWAGVFICYVSPQTKNSDWV NWEIEYAAKQGKRIVGVWEHGEKECDLPDALKEHADALVGWNGDSIIDAINGKDSWEKPDGGACDPVSLKRHPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17312; Mature: 17180
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKRNVFISHVHKDDHGLQKLKDLLAPKGVEVRDSSIHTGKFNNATDEHYIKTQILAPA CCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEECCCEECCCCCCCCCCHHHHHHHHHCC INWAGVFICYVSPQTKNSDWVNWEIEYAAKQGKRIVGVWEHGEKECDLPDALKEHADALV CCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHEEE GWNGDSIIDAINGKDSWEKPDGGACDPVSLKRHPC CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADKRNVFISHVHKDDHGLQKLKDLLAPKGVEVRDSSIHTGKFNNATDEHYIKTQILAPA CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEECCCEECCCCCCCCCCHHHHHHHHHCC INWAGVFICYVSPQTKNSDWVNWEIEYAAKQGKRIVGVWEHGEKECDLPDALKEHADALV CCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHEEE GWNGDSIIDAINGKDSWEKPDGGACDPVSLKRHPC CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA