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The map label for this gene is zntR [H]

Identifier: 222110418

GI number: 222110418

Start: 1277793

End: 1278251

Strand: Direct

Name: zntR [H]

Synonym: Dtpsy_1215

Alternate gene names: 222110418

Gene position: 1277793-1278251 (Clockwise)

Preceding gene: 222110405

Following gene: 222110419

Centisome position: 33.66

GC content: 69.93

Gene sequence:

>459_bases
ATGCTGCGACAAAGCCCCCGCCACCGTATCGGTGATGCCGCCCGGCTCTCGGGCGTGCCACCGGCCAACATCCGCTATTA
CGAAAAGGAAGGCCTGCTGCCCGCGCAGACCCGCGCGGACAACCGCTACCGCCTCTACAGCGACGAGGAGGTCCACCGCA
TGCGCTTCGTGCGGCTGTGCCGCGCCATGGACATGTCGCTGCAGGAGGTGCGCGGCCTGCTGGCATTGGACGCCTGCAGT
ACCACCGACGGCCATGCCGCCTGCGTCACGCTGGACGAGCACCTGGCGCACGTGCGCACGCGCATGGCCGAGCTGGCGAC
GCTGGAGCAGGAACTGCTGTCGCTGCGCAGCCGTTGCGACGGCACGGGAGGGCAGTGCCACGTGATCGAGGCGTTGCATG
CACGCGCCGATGCCGATCCCGTGCCGCCCGCAGGGCCGGCGGCCCGCAGGCATGTATGA

Upstream 100 bases:

>100_bases
GTTTGCCGCGCCCGGGCCATGGGAATGGGACGCGGAATGGGAGGAATGGCTTTGGCTCATGCCATGATTGGAAACCTTGA
AGCCACTCCAAGGTCAAGCC

Downstream 100 bases:

>100_bases
GGCCCATGGCACAGGTTGCTATGGTGTTAATAGCTGCTAGCGCTTGCTGCACAAGCGCTAGCGGCCAATTTGTTACTTAT
CGAATGCAGCCTTCGCCTAT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MLRQSPRHRIGDAARLSGVPPANIRYYEKEGLLPAQTRADNRYRLYSDEEVHRMRFVRLCRAMDMSLQEVRGLLALDACS
TTDGHAACVTLDEHLAHVRTRMAELATLEQELLSLRSRCDGTGGQCHVIEALHARADADPVPPAGPAARRHV

Sequences:

>Translated_152_residues
MLRQSPRHRIGDAARLSGVPPANIRYYEKEGLLPAQTRADNRYRLYSDEEVHRMRFVRLCRAMDMSLQEVRGLLALDACS
TTDGHAACVTLDEHLAHVRTRMAELATLEQELLSLRSRCDGTGGQCHVIEALHARADADPVPPAGPAARRHV
>Mature_152_residues
MLRQSPRHRIGDAARLSGVPPANIRYYEKEGLLPAQTRADNRYRLYSDEEVHRMRFVRLCRAMDMSLQEVRGLLALDACS
TTDGHAACVTLDEHLAHVRTRMAELATLEQELLSLRSRCDGTGGQCHVIEALHARADADPVPPAGPAARRHV

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=140, Percent_Identity=31.4285714285714, Blast_Score=80, Evalue=5e-17,
Organism=Escherichia coli, GI1786695, Length=127, Percent_Identity=30.7086614173228, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16948; Mature: 16948

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRQSPRHRIGDAARLSGVPPANIRYYEKEGLLPAQTRADNRYRLYSDEEVHRMRFVRLC
CCCCCCCHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH
RAMDMSLQEVRGLLALDACSTTDGHAACVTLDEHLAHVRTRMAELATLEQELLSLRSRCD
HHHCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTGGQCHVIEALHARADADPVPPAGPAARRHV
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRQSPRHRIGDAARLSGVPPANIRYYEKEGLLPAQTRADNRYRLYSDEEVHRMRFVRLC
CCCCCCCHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH
RAMDMSLQEVRGLLALDACSTTDGHAACVTLDEHLAHVRTRMAELATLEQELLSLRSRCD
HHHCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTGGQCHVIEALHARADADPVPPAGPAARRHV
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]