| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110405
Identifier: 222110405
GI number: 222110405
Start: 1263315
End: 1265543
Strand: Direct
Name: 222110405
Synonym: Dtpsy_1201
Alternate gene names: NA
Gene position: 1263315-1265543 (Clockwise)
Preceding gene: 222110404
Following gene: 222110418
Centisome position: 33.28
GC content: 67.12
Gene sequence:
>2229_bases ATGTCCCTTTCCGCGTCCCGCGCCCGTACGGTTTTTCGCGCCTGCGTTGTCAACGCCGTCAGGGACAGCGAGGCACTGAT GGAGGCGCTGGTGACTGGTACGCGCGAAGCGCTCACGGCGCAGGAGTCCTCCACCCGCGACCTTCACAAGCGTACCCAGA TCAGCGATGCCTTGCGCCTGCTCAAGCAGCACGAGGCTTCGTTGCCCAAGGCCTACCCCATGGCCTTGCTGGAGATTTTT GCCGAAGGCCCCTCGGCCGCGAAGACGAGGGCCGGGCAGCCCGGCGGAATGGACCTGGGCGAGCTCGCCCTCATGGACGA TGCCGACGTGCTGGTCCAGGTGGAGCTGTCGCGGGCACAGCAGATCGCCGCTCTGGCGACAGAGGCAACGCTGGCGGAAC TCAACACGCTCGTCAGTTCGGCGCAGGGCCTGCACAGCGTGCAACCCGAGAGCAACCCTTTTCGCCCTGAGAACTACATC CGCGCGCTGCAGCAAGTGGTGAGCGATACCGGTGTAAGTGGGGAAGTGCGGCAGCTGTGGATGAGCCAGATGCGCGAACT GCTGGGCATGCAACTGGTAAGCGCCTATAAGCGCGCCGCCCAGAGCCTGCGCGAGCATGGCGTCGAGCCCGTGGGCTACG CGGTGGCGGGAGCCCCGGGTGTGCGCAGCGGGCATGGTGGTGGATATGCCCACAGTTCCCAGATGGGCGTGGGCTACGCG CCGCCCTCGGCCTATGGTGCGCCGGCCAGCGAATATGGTGCCGCGAGCGCCTATGGCCAAGGTTACGGGGCAGGCTGGGG AGGCGCCTCGGGCAACGTGGCCTTGGCGCCGCAGGCCGAAGAAGCGCTGCTGACGGTGGGTATCCTGCGCCAGATGCTGG CCGGTGGTGGTGACCCTTTCGCCTACGATGCACGCGGCGGCTATACGGCAGCTACTCCGGCCAACGCGTACGTCACGCCG GCCGCGGTGGAAGCAATGGAAGACATTGCGCAGCTGGAACGCATCGTGGGTCGTCTGTCGGGAGGGGCTGCGGTCCCGGT GACGGGCTGGAACGGCACCTCTGCACATGCGCCGGTGGCGGCACCCCCCACGCGGACGGCGCATGAGGTCGTGAGCCGCA TGATGGACAACATTGCGCAGGATTCGCGGCTGCTGCCCCCCATGCAGCGTGCCGTGCAAAGCCTGGAGCCCGCGCTGAAG GAGTTGGTGCAGCACGACACGCGGTTCTTCACGGATGAGCAGCACCCCGCCCGGCGCCTGCTGGACGAGTTGACCCAGCG CAGCCTGGCATTCAACGCCGAGGATGGGCCCGCCTTCAGCCGCTTCATGCGGCTGGTGAACGAAGCCGTAGGCCACCTGG CTTCCATCGAGATCCGGGATGCCGCACCGTTCGCCCAAGTGCTCAAGGCGCTGGAAAAGGCCTGGACCGCGCAGGAGCGT CGCCAGCTTGAACGCCATGAAGCGCAGCAGCGCGAACTGCTCCAGCGGGAGCAGCGGGAATTGCTGGCCGAGAAGATTGC CGCCGACTTCCGCCGCCTGCCCGATGCGGACAAGGTACCGGCCGACCTGCTGGCCTTCGTGACCGGCCCGTGGGCGGATG TGGTGGCGCAGGCGCAAAGCAGCCAGCCCCAGGAAACCGGCGGAGATCCCGGAGGCTACCTGGCGTTGGTGCCGCTGCTG CTGTGCTGCGCGCAGCCCGAGCAGTTGCGCTCGGACCCGGAGCGCCTGGGCCAGGCCATTGCCGACATGGTGCCGGTGTT GGTGCGTGGGCTGGAGAGCATTGACCACCCGATCGAGCGTATTGCCGAAGTGACGCAGCGCTTAGCGCAGCTTCAGGGTG AAGCGCTGAACTACGCAGCGGCGAGCGTCTTCGGCGACACGCCGGCGGAAGAGGTCAGCCCTGAAACCCGCGCTGACGAT GTGCTGTCTTCCGATACGGCCGCCGCGGCGGACCCGTCGATGGCCGGAGCAGTGGCTCAGCCCGCATTGCGCATCGGCCA GTGGGTGGAAATCATCACCAACCAGGGTGCGGTACGAACCCAGCTCACCTGGTGCAGCCCGCACAACACGCTTTTTTTGT TCACCGGAGCCGACGCGAGCACGCAGTCCATGACGCGGCGCATGATCGACAAACTGTCCTCCGACGGGGCATTCCGCCTG ATTTCCGACCAGCCGGTGGTGGACCGCGCTTTGCGCGCCGTGCGCACCAAGCCGGCCAAGCTGCGCTAG
Upstream 100 bases:
>100_bases GGGTGCGAAACCGAAGCGTATGCGCTACAAGGCCCTCAAATAAGCACTTACAGGTAGTAGCATCGGGCGGACCGCCGCCC ATTCTTCGTCCGTCCCCACC
Downstream 100 bases:
>100_bases GGCGCTCCGCCGGTCGCGGGGACTGCCGTTCAGCCTGCCGCGCGTGGCAGGCGCCGGCGCACCAGTTGGATGTGGTTGCG CAGGGCGTAGAGCTCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 742; Mature: 741
Protein sequence:
>742_residues MSLSASRARTVFRACVVNAVRDSEALMEALVTGTREALTAQESSTRDLHKRTQISDALRLLKQHEASLPKAYPMALLEIF AEGPSAAKTRAGQPGGMDLGELALMDDADVLVQVELSRAQQIAALATEATLAELNTLVSSAQGLHSVQPESNPFRPENYI RALQQVVSDTGVSGEVRQLWMSQMRELLGMQLVSAYKRAAQSLREHGVEPVGYAVAGAPGVRSGHGGGYAHSSQMGVGYA PPSAYGAPASEYGAASAYGQGYGAGWGGASGNVALAPQAEEALLTVGILRQMLAGGGDPFAYDARGGYTAATPANAYVTP AAVEAMEDIAQLERIVGRLSGGAAVPVTGWNGTSAHAPVAAPPTRTAHEVVSRMMDNIAQDSRLLPPMQRAVQSLEPALK ELVQHDTRFFTDEQHPARRLLDELTQRSLAFNAEDGPAFSRFMRLVNEAVGHLASIEIRDAAPFAQVLKALEKAWTAQER RQLERHEAQQRELLQREQRELLAEKIAADFRRLPDADKVPADLLAFVTGPWADVVAQAQSSQPQETGGDPGGYLALVPLL LCCAQPEQLRSDPERLGQAIADMVPVLVRGLESIDHPIERIAEVTQRLAQLQGEALNYAAASVFGDTPAEEVSPETRADD VLSSDTAAAADPSMAGAVAQPALRIGQWVEIITNQGAVRTQLTWCSPHNTLFLFTGADASTQSMTRRMIDKLSSDGAFRL ISDQPVVDRALRAVRTKPAKLR
Sequences:
>Translated_742_residues MSLSASRARTVFRACVVNAVRDSEALMEALVTGTREALTAQESSTRDLHKRTQISDALRLLKQHEASLPKAYPMALLEIF AEGPSAAKTRAGQPGGMDLGELALMDDADVLVQVELSRAQQIAALATEATLAELNTLVSSAQGLHSVQPESNPFRPENYI RALQQVVSDTGVSGEVRQLWMSQMRELLGMQLVSAYKRAAQSLREHGVEPVGYAVAGAPGVRSGHGGGYAHSSQMGVGYA PPSAYGAPASEYGAASAYGQGYGAGWGGASGNVALAPQAEEALLTVGILRQMLAGGGDPFAYDARGGYTAATPANAYVTP AAVEAMEDIAQLERIVGRLSGGAAVPVTGWNGTSAHAPVAAPPTRTAHEVVSRMMDNIAQDSRLLPPMQRAVQSLEPALK ELVQHDTRFFTDEQHPARRLLDELTQRSLAFNAEDGPAFSRFMRLVNEAVGHLASIEIRDAAPFAQVLKALEKAWTAQER RQLERHEAQQRELLQREQRELLAEKIAADFRRLPDADKVPADLLAFVTGPWADVVAQAQSSQPQETGGDPGGYLALVPLL LCCAQPEQLRSDPERLGQAIADMVPVLVRGLESIDHPIERIAEVTQRLAQLQGEALNYAAASVFGDTPAEEVSPETRADD VLSSDTAAAADPSMAGAVAQPALRIGQWVEIITNQGAVRTQLTWCSPHNTLFLFTGADASTQSMTRRMIDKLSSDGAFRL ISDQPVVDRALRAVRTKPAKLR >Mature_741_residues SLSASRARTVFRACVVNAVRDSEALMEALVTGTREALTAQESSTRDLHKRTQISDALRLLKQHEASLPKAYPMALLEIFA EGPSAAKTRAGQPGGMDLGELALMDDADVLVQVELSRAQQIAALATEATLAELNTLVSSAQGLHSVQPESNPFRPENYIR ALQQVVSDTGVSGEVRQLWMSQMRELLGMQLVSAYKRAAQSLREHGVEPVGYAVAGAPGVRSGHGGGYAHSSQMGVGYAP PSAYGAPASEYGAASAYGQGYGAGWGGASGNVALAPQAEEALLTVGILRQMLAGGGDPFAYDARGGYTAATPANAYVTPA AVEAMEDIAQLERIVGRLSGGAAVPVTGWNGTSAHAPVAAPPTRTAHEVVSRMMDNIAQDSRLLPPMQRAVQSLEPALKE LVQHDTRFFTDEQHPARRLLDELTQRSLAFNAEDGPAFSRFMRLVNEAVGHLASIEIRDAAPFAQVLKALEKAWTAQERR QLERHEAQQRELLQREQRELLAEKIAADFRRLPDADKVPADLLAFVTGPWADVVAQAQSSQPQETGGDPGGYLALVPLLL CCAQPEQLRSDPERLGQAIADMVPVLVRGLESIDHPIERIAEVTQRLAQLQGEALNYAAASVFGDTPAEEVSPETRADDV LSSDTAAAADPSMAGAVAQPALRIGQWVEIITNQGAVRTQLTWCSPHNTLFLFTGADASTQSMTRRMIDKLSSDGAFRLI SDQPVVDRALRAVRTKPAKLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79423; Mature: 79292
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSASRARTVFRACVVNAVRDSEALMEALVTGTREALTAQESSTRDLHKRTQISDALRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LKQHEASLPKAYPMALLEIFAEGPSAAKTRAGQPGGMDLGELALMDDADVLVQVELSRAQ HHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHEECCCCCEEEEHHHHHH QIAALATEATLAELNTLVSSAQGLHSVQPESNPFRPENYIRALQQVVSDTGVSGEVRQLW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH MSQMRELLGMQLVSAYKRAAQSLREHGVEPVGYAVAGAPGVRSGHGGGYAHSSQMGVGYA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC PPSAYGAPASEYGAASAYGQGYGAGWGGASGNVALAPQAEEALLTVGILRQMLAGGGDPF CCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCC AYDARGGYTAATPANAYVTPAAVEAMEDIAQLERIVGRLSGGAAVPVTGWNGTSAHAPVA EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC APPTRTAHEVVSRMMDNIAQDSRLLPPMQRAVQSLEPALKELVQHDTRFFTDEQHPARRL CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LDELTQRSLAFNAEDGPAFSRFMRLVNEAVGHLASIEIRDAAPFAQVLKALEKAWTAQER HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH RQLERHEAQQRELLQREQRELLAEKIAADFRRLPDADKVPADLLAFVTGPWADVVAQAQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHC SQPQETGGDPGGYLALVPLLLCCAQPEQLRSDPERLGQAIADMVPVLVRGLESIDHPIER CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAEVTQRLAQLQGEALNYAAASVFGDTPAEEVSPETRADDVLSSDTAAAADPSMAGAVAQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHH PALRIGQWVEIITNQGAVRTQLTWCSPHNTLFLFTGADASTQSMTRRMIDKLSSDGAFRL HHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE ISDQPVVDRALRAVRTKPAKLR ECCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLSASRARTVFRACVVNAVRDSEALMEALVTGTREALTAQESSTRDLHKRTQISDALRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LKQHEASLPKAYPMALLEIFAEGPSAAKTRAGQPGGMDLGELALMDDADVLVQVELSRAQ HHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHEECCCCCEEEEHHHHHH QIAALATEATLAELNTLVSSAQGLHSVQPESNPFRPENYIRALQQVVSDTGVSGEVRQLW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH MSQMRELLGMQLVSAYKRAAQSLREHGVEPVGYAVAGAPGVRSGHGGGYAHSSQMGVGYA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC PPSAYGAPASEYGAASAYGQGYGAGWGGASGNVALAPQAEEALLTVGILRQMLAGGGDPF CCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCC AYDARGGYTAATPANAYVTPAAVEAMEDIAQLERIVGRLSGGAAVPVTGWNGTSAHAPVA EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC APPTRTAHEVVSRMMDNIAQDSRLLPPMQRAVQSLEPALKELVQHDTRFFTDEQHPARRL CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LDELTQRSLAFNAEDGPAFSRFMRLVNEAVGHLASIEIRDAAPFAQVLKALEKAWTAQER HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH RQLERHEAQQRELLQREQRELLAEKIAADFRRLPDADKVPADLLAFVTGPWADVVAQAQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHC SQPQETGGDPGGYLALVPLLLCCAQPEQLRSDPERLGQAIADMVPVLVRGLESIDHPIER CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAEVTQRLAQLQGEALNYAAASVFGDTPAEEVSPETRADDVLSSDTAAAADPSMAGAVAQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHH PALRIGQWVEIITNQGAVRTQLTWCSPHNTLFLFTGADASTQSMTRRMIDKLSSDGAFRL HHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE ISDQPVVDRALRAVRTKPAKLR ECCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA