Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222110401

Identifier: 222110401

GI number: 222110401

Start: 1256345

End: 1256764

Strand: Direct

Name: 222110401

Synonym: Dtpsy_1196

Alternate gene names: NA

Gene position: 1256345-1256764 (Clockwise)

Preceding gene: 222110400

Following gene: 222110404

Centisome position: 33.09

GC content: 65.24

Gene sequence:

>420_bases
GTGGATGGTCCACTGTGTCTGGTCTATGAGGAAACCATCGAAGGGCTGGACGGCATGGAGCGGTCGCGTTACTGGCTGTT
GGCCGATGGATGGACCATGGGCCATGCCCCCTGTGTGGAAAACCTGGCGGCCGTGGTGCATGTGGCGCAGCAGGCGGGTG
TGCTGGTGGTGGGCAAGGAGTTGAGGGCGCCTGACCTGGTGCGCCTGCAAGAAGGCCAAGCGGTGGTGCCGGAACTGCTG
CAGCGCACGCGGGGCAGTTGGTATCCCACCGATCTGGTGAACCCACCTCCCCAGCACGATTCGCCGTGGCGTCAGGCTAT
GTGGCATGGTGGGCAGGGTTTGTTGGCGCGGCCAGACACCGTCACTGCGTCCCAGGCCGCAACGCCTGCGGCAGAGCCTC
TCGATCAGGCTGGGCAGTAG

Upstream 100 bases:

>100_bases
CTGACCATGTCTTGGGTAGGCGAAGCCACGGGCCTGTGGGGTGTGCTCAGCAAGGGCTGGGACTGGTGGCGGGGCAGGCG
CGACCCCCGTAGGGCCGGGT

Downstream 100 bases:

>100_bases
AGCTTGCGCACCTGTCGCGCAGCGGGAAATCGAAGACGGCCGAGTCAGCGCTGGAGCAGGCCCTGATCGCGCGCTTCGCC
ACGCTGGGCCGAGTACCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDGPLCLVYEETIEGLDGMERSRYWLLADGWTMGHAPCVENLAAVVHVAQQAGVLVVGKELRAPDLVRLQEGQAVVPELL
QRTRGSWYPTDLVNPPPQHDSPWRQAMWHGGQGLLARPDTVTASQAATPAAEPLDQAGQ

Sequences:

>Translated_139_residues
MDGPLCLVYEETIEGLDGMERSRYWLLADGWTMGHAPCVENLAAVVHVAQQAGVLVVGKELRAPDLVRLQEGQAVVPELL
QRTRGSWYPTDLVNPPPQHDSPWRQAMWHGGQGLLARPDTVTASQAATPAAEPLDQAGQ
>Mature_139_residues
MDGPLCLVYEETIEGLDGMERSRYWLLADGWTMGHAPCVENLAAVVHVAQQAGVLVVGKELRAPDLVRLQEGQAVVPELL
QRTRGSWYPTDLVNPPPQHDSPWRQAMWHGGQGLLARPDTVTASQAATPAAEPLDQAGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15129; Mature: 15129

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGPLCLVYEETIEGLDGMERSRYWLLADGWTMGHAPCVENLAAVVHVAQQAGVLVVGKE
CCCCEEEEEHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCC
LRAPDLVRLQEGQAVVPELLQRTRGSWYPTDLVNPPPQHDSPWRQAMWHGGQGLLARPDT
CCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCC
VTASQAATPAAEPLDQAGQ
CCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MDGPLCLVYEETIEGLDGMERSRYWLLADGWTMGHAPCVENLAAVVHVAQQAGVLVVGKE
CCCCEEEEEHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCC
LRAPDLVRLQEGQAVVPELLQRTRGSWYPTDLVNPPPQHDSPWRQAMWHGGQGLLARPDT
CCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCC
VTASQAATPAAEPLDQAGQ
CCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA