| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110356
Identifier: 222110356
GI number: 222110356
Start: 1205743
End: 1207053
Strand: Direct
Name: 222110356
Synonym: Dtpsy_1147
Alternate gene names: NA
Gene position: 1205743-1207053 (Clockwise)
Preceding gene: 222110355
Following gene: 222110357
Centisome position: 31.76
GC content: 63.69
Gene sequence:
>1311_bases ATGCTCTCCGTCCTAAAGAACCGCACCTACCGCCACCTGTTCACCGCGCAGGTGATCGCACTCGTCGGCACAGGCCTGAT GACGGTAGCGCTCGGCCTACTTGCCTACGAGCTGGCCGGGGCCGATGCAGGTGCGGTGCTCGGGTCGGCGCTGGCTATCA AGATGCTGGCCTATGTGGGAGTCGCTCCAGTCGCACAGGCCTTCGCCGACCAGTTCCCGCGACGGTCATTGCTCGTAGCG CTGGACCTGGTACGAGCGGTTGTCGCGATCTGTTTGCCCTTTGTCACCGAGGTCTGGCAGATCTATCTGCTGATCTTTGT CCTGCAAGCGGCATCCGCCGGCTTCACGCCGACTTTCCAAGCCACTATCCCGGACATCCTTCCCGATGAAGAGGACTACA CGAAGGCGCTGTCGCTGTCCCGGCTGGCCTATGACCTGGAAAGCCTGATTTCCCCGATGCTGGCTGCTGCGCTGCTGACC GTCATCAGCTTTCACAACCTGTTCGCGGGAACAGTGCTCGGTTTCCTCGTTTCAGCCGCGCTCGTGGTCAGCGTGCGGTT GCCCACAACTATTCCCGGACCGCGCCGCGGCATTTGGGATCGCACGACCCGCGGCACACGCATCTATCTCGCTACGCCAC GCCTGCGGGGCCTGCTGGCGATCAGCTTGGCCGTCTCGGCGGCGGGCGCCATGGTGATCGTGAACACGGTGGTTCTCGTG AAGGCGCGCTTTGGCCTAGGCGAGGTCGAAGTGGCGTCGGCACTGGCGGCATTCGGAGGCGGTTCGATGGTGGCAGCCTT CGTTCTGCCATCCTTACTGGAAAAGGTGGCCGACCGAACCGCGATGCTCACCGGCGCTACCGTACTGGTCGTGGGCACGG GGATCGGCGCACTGCTGCCGAGCTATGCATTGTTGCTGCCGCTGTGGTTGATCATCGGCTTTGGCTACAGCGTGGCGCAA ACGCCATCCGGCCGTCTTCTGCGCCGCTCGGCCCATGCCGAGGACCGTCCTGCGATCTTCGCGGCACACTTCGCGCTGTC GCACGCCTGTTGGCTCATCTGCTACCCACTTGCCGGCCGCTTCGGCGCGGTCATGGGCTTGCCATCGACCTTCATTGTCA TGTCCCTGGTCGGCTTGGCCGGCGTGGCGCTGACGCTCTGGCTGTGGCCGGCCAGCGACCCTTCTGACGTGGCGCATGAC CACCCCAGCTTGCCGCCGGATCACCCTCATTTACGCACACACGCAGACCAAGGCAGGCACCATCACCAGCTGATTCTGGA TGACCTGCACCGTATCTGGCCGAAAGGATAG
Upstream 100 bases:
>100_bases CGTCCTGATCCATGACCACATCGACCACTGCCTATCTCATGATGAGGACTCCGTTCTAGCCGAAATGAAGGCGCTAACCA GACTGCTCTGAGGTCTCTCG
Downstream 100 bases:
>100_bases GCACATTTTCTCGTTGCGGCATCACAACGCATGGCTTCGGAGGCTGAGAAGGGTGAGCGAAAATATATCACATGAACACA TATTCATGTGTTATATTTCG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Nickel Resistance Protein; NreB Protein; Transporter Facilitator Family; MFS Ni2+ Efflux Pump NreB; MFS Transporter; MFS Family Transporter Protein; NrbE-Like Protein; NcrA-Like Facilitator Superfamily Permease; Integral Membrane Protein; Nickel-Resistant Pritein NcrA; Nickel Resistance; Permeases Of Facilitator Superfamily
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MLSVLKNRTYRHLFTAQVIALVGTGLMTVALGLLAYELAGADAGAVLGSALAIKMLAYVGVAPVAQAFADQFPRRSLLVA LDLVRAVVAICLPFVTEVWQIYLLIFVLQAASAGFTPTFQATIPDILPDEEDYTKALSLSRLAYDLESLISPMLAAALLT VISFHNLFAGTVLGFLVSAALVVSVRLPTTIPGPRRGIWDRTTRGTRIYLATPRLRGLLAISLAVSAAGAMVIVNTVVLV KARFGLGEVEVASALAAFGGGSMVAAFVLPSLLEKVADRTAMLTGATVLVVGTGIGALLPSYALLLPLWLIIGFGYSVAQ TPSGRLLRRSAHAEDRPAIFAAHFALSHACWLICYPLAGRFGAVMGLPSTFIVMSLVGLAGVALTLWLWPASDPSDVAHD HPSLPPDHPHLRTHADQGRHHHQLILDDLHRIWPKG
Sequences:
>Translated_436_residues MLSVLKNRTYRHLFTAQVIALVGTGLMTVALGLLAYELAGADAGAVLGSALAIKMLAYVGVAPVAQAFADQFPRRSLLVA LDLVRAVVAICLPFVTEVWQIYLLIFVLQAASAGFTPTFQATIPDILPDEEDYTKALSLSRLAYDLESLISPMLAAALLT VISFHNLFAGTVLGFLVSAALVVSVRLPTTIPGPRRGIWDRTTRGTRIYLATPRLRGLLAISLAVSAAGAMVIVNTVVLV KARFGLGEVEVASALAAFGGGSMVAAFVLPSLLEKVADRTAMLTGATVLVVGTGIGALLPSYALLLPLWLIIGFGYSVAQ TPSGRLLRRSAHAEDRPAIFAAHFALSHACWLICYPLAGRFGAVMGLPSTFIVMSLVGLAGVALTLWLWPASDPSDVAHD HPSLPPDHPHLRTHADQGRHHHQLILDDLHRIWPKG >Mature_436_residues MLSVLKNRTYRHLFTAQVIALVGTGLMTVALGLLAYELAGADAGAVLGSALAIKMLAYVGVAPVAQAFADQFPRRSLLVA LDLVRAVVAICLPFVTEVWQIYLLIFVLQAASAGFTPTFQATIPDILPDEEDYTKALSLSRLAYDLESLISPMLAAALLT VISFHNLFAGTVLGFLVSAALVVSVRLPTTIPGPRRGIWDRTTRGTRIYLATPRLRGLLAISLAVSAAGAMVIVNTVVLV KARFGLGEVEVASALAAFGGGSMVAAFVLPSLLEKVADRTAMLTGATVLVVGTGIGALLPSYALLLPLWLIIGFGYSVAQ TPSGRLLRRSAHAEDRPAIFAAHFALSHACWLICYPLAGRFGAVMGLPSTFIVMSLVGLAGVALTLWLWPASDPSDVAHD HPSLPPDHPHLRTHADQGRHHHQLILDDLHRIWPKG
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46358; Mature: 46358
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVLKNRTYRHLFTAQVIALVGTGLMTVALGLLAYELAGADAGAVLGSALAIKMLAYVG CCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VAPVAQAFADQFPRRSLLVALDLVRAVVAICLPFVTEVWQIYLLIFVLQAASAGFTPTFQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ATIPDILPDEEDYTKALSLSRLAYDLESLISPMLAAALLTVISFHNLFAGTVLGFLVSAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVSVRLPTTIPGPRRGIWDRTTRGTRIYLATPRLRGLLAISLAVSAAGAMVIVNTVVLV HHHHEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH KARFGLGEVEVASALAAFGGGSMVAAFVLPSLLEKVADRTAMLTGATVLVVGTGIGALLP HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHH SYALLLPLWLIIGFGYSVAQTPSGRLLRRSAHAEDRPAIFAAHFALSHACWLICYPLAGR HHHHHHHHHHHHHCCCHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FGAVMGLPSTFIVMSLVGLAGVALTLWLWPASDPSDVAHDHPSLPPDHPHLRTHADQGRH HHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCH HHQLILDDLHRIWPKG HHHHHHHHHHHHCCCC >Mature Secondary Structure MLSVLKNRTYRHLFTAQVIALVGTGLMTVALGLLAYELAGADAGAVLGSALAIKMLAYVG CCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VAPVAQAFADQFPRRSLLVALDLVRAVVAICLPFVTEVWQIYLLIFVLQAASAGFTPTFQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ATIPDILPDEEDYTKALSLSRLAYDLESLISPMLAAALLTVISFHNLFAGTVLGFLVSAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVSVRLPTTIPGPRRGIWDRTTRGTRIYLATPRLRGLLAISLAVSAAGAMVIVNTVVLV HHHHEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH KARFGLGEVEVASALAAFGGGSMVAAFVLPSLLEKVADRTAMLTGATVLVVGTGIGALLP HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHH SYALLLPLWLIIGFGYSVAQTPSGRLLRRSAHAEDRPAIFAAHFALSHACWLICYPLAGR HHHHHHHHHHHHHCCCHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FGAVMGLPSTFIVMSLVGLAGVALTLWLWPASDPSDVAHDHPSLPPDHPHLRTHADQGRH HHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCH HHQLILDDLHRIWPKG HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA