Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is xlnD [H]

Identifier: 222110280

GI number: 222110280

Start: 1111626

End: 1112870

Strand: Direct

Name: xlnD [H]

Synonym: Dtpsy_1067

Alternate gene names: 222110280

Gene position: 1111626-1112870 (Clockwise)

Preceding gene: 222110279

Following gene: 222110285

Centisome position: 29.28

GC content: 72.37

Gene sequence:

>1245_bases
ATGCAGAAACAAGTCTTAATCGCAGGCGGTGGCATCGGAGGATTGGCTGCCGCCCTGGGTAGCTCGCGTGCCGGGTGGGA
AGTGCGCCTCTTCGAGCGTGCCGCGGAGTTCACCGAGTTGGGCGCCGGCGTGCAGATCGGCCCGAACGTGGTGCGCCGGC
TGCAGGCCTGGGGCCTGCAGAGCGCGCTGCAGGCCGTGGCCGCCTTCCCCGAGCGTCTGCAGGTGCGCAGTGCGCTCACC
GGCGCTGAGTTGGCGGCGCTGCGCCTGGGCAACACCGCCATCGAGCGCTACGGCGCCGCCTACGCCACCATCCACCGTGC
GGACCTGCACGGCCTGCTGCTCGATGCATTGCGCGAGCGCACTGGTGTGCACCTGAACCTGGGCCATTCCATCGTGCACC
ATGCGCAAGACGGTGGCGTGGTCACCGTGCGCGTAACGCGCCACGGCCCGGGAAGCGACAGCGAGGGCGGTGCGCAAGAT
CTGCTGATCGAAGGCGATGCGCTCATCGGCGCCGACGGCCTGCGCAGCGGCACGCGCATGCGTTTGCTGGGTGAGACGCC
CACGCGAGTCTCCGGCCACCTGGCCTACCGCGCCGTGGTGCGCCAGGACGCGCTGCCCCAGGCGCTGCGCAGCCAGCAGG
TGACCGCCTGGCTGGGGCCGCGCCTGCACGTGGTGCAGTACCCGCTGCGCCGTGGCGAATTGCTGAACGTGGTGGCCATC
CGCCACGGGCAGCCGCCGGCCGACCTCGATTCCTGGGACCATGGCGCCAACGCGGCCGATCTGGAGGCCGCGCTGGCCCA
CACCTGCACGCCGCTGCAGGACTTGATTCGCGCCGTGCCGCAGGCGGGCAGCGGCTGGCGCCTGTGGCCGCTGCTGGACC
GCCCGCCCGTCGCCGGCCCGCAAGAGATGGCGCAGGGCTTGGTGGCGTTGCTGGGCGACGCGGCGCACCCCATGCGGCCC
TACCTGGCGCAAGGCGCCGGCATGGCCATCGAGGACGCGGCCGAGCTGCAGCGCGCCCTGGCCATGCACGACCTGGAAGT
ACCGCTGCGCCTGCGCCGTTACGCGCTCAACCGCTGGCAGCGCAACGCGCGCGTGCAGGAGCGCTCGCGGCGCAACGGGC
GCATCTTCCATGCCACGGGCCTCGTGCGCTGGGGGCGCGACACGGCGTTGCGGCTGCTGGGAGAGCGGCTGCTGGACGTG
CCCTGGCTCTACCGGGGCGACGGCTCCAGCGCCAGCTCGCTATGA

Upstream 100 bases:

>100_bases
GGCCCCAGGCGGTGCGATCTGGTCTGCGCGCCGTGGGATTGCGCCATGCCTGGTGCACCGCTGATAGCAGGGTGGCTGCC
GGTGGGCGGACAATCGGTCC

Downstream 100 bases:

>100_bases
ACGTGCGCTGGGGCAGTTCGCACCTGATGCTATTTAATTAATAGCTGTTTGCGCTTGTACCGTAAGCGATAGCGGCAGAT
TTGACTGCTATCTTTCACCC

Product: FAD-binding monooxygenase

Products: NA

Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQSALQAVAAFPERLQVRSALT
GAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRERTGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQD
LLIEGDALIGADGLRSGTRMRLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI
RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGPQEMAQGLVALLGDAAHPMRP
YLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQRNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDV
PWLYRGDGSSASSL

Sequences:

>Translated_414_residues
MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQSALQAVAAFPERLQVRSALT
GAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRERTGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQD
LLIEGDALIGADGLRSGTRMRLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI
RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGPQEMAQGLVALLGDAAHPMRP
YLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQRNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDV
PWLYRGDGSSASSL
>Mature_414_residues
MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQSALQAVAAFPERLQVRSALT
GAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRERTGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQD
LLIEGDALIGADGLRSGTRMRLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI
RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGPQEMAQGLVALLGDAAHPMRP
YLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQRNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDV
PWLYRGDGSSASSL

Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.24 [H]

Molecular weight: Translated: 44728; Mature: 44728

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQ
CCCEEEEECCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCEECHHHHHHHHHHCHH
SALQAVAAFPERLQVRSALTGAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRER
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHCCHHHEEEHHHHHHHHHHHHHHH
TGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQDLLIEGDALIGADGLRSGTRM
CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEECCCCCCCCCEE
RLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCHHCCCEEEEEEE
RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGP
ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCH
QEMAQGLVALLGDAAHPMRPYLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQ
HHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDVPWLYRGDGSSASSL
HHHHHHHHHCCCCEEEEECCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCC
>Mature Secondary Structure
MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQ
CCCEEEEECCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCEECHHHHHHHHHHCHH
SALQAVAAFPERLQVRSALTGAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRER
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHCCHHHEEEHHHHHHHHHHHHHHH
TGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQDLLIEGDALIGADGLRSGTRM
CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEECCCCCCCCCEE
RLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCHHCCCEEEEEEE
RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGP
ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCH
QEMAQGLVALLGDAAHPMRPYLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQ
HHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDVPWLYRGDGSSASSL
HHHHHHHHHCCCCEEEEECCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12909360 [H]