| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is xlnD [H]
Identifier: 222110280
GI number: 222110280
Start: 1111626
End: 1112870
Strand: Direct
Name: xlnD [H]
Synonym: Dtpsy_1067
Alternate gene names: 222110280
Gene position: 1111626-1112870 (Clockwise)
Preceding gene: 222110279
Following gene: 222110285
Centisome position: 29.28
GC content: 72.37
Gene sequence:
>1245_bases ATGCAGAAACAAGTCTTAATCGCAGGCGGTGGCATCGGAGGATTGGCTGCCGCCCTGGGTAGCTCGCGTGCCGGGTGGGA AGTGCGCCTCTTCGAGCGTGCCGCGGAGTTCACCGAGTTGGGCGCCGGCGTGCAGATCGGCCCGAACGTGGTGCGCCGGC TGCAGGCCTGGGGCCTGCAGAGCGCGCTGCAGGCCGTGGCCGCCTTCCCCGAGCGTCTGCAGGTGCGCAGTGCGCTCACC GGCGCTGAGTTGGCGGCGCTGCGCCTGGGCAACACCGCCATCGAGCGCTACGGCGCCGCCTACGCCACCATCCACCGTGC GGACCTGCACGGCCTGCTGCTCGATGCATTGCGCGAGCGCACTGGTGTGCACCTGAACCTGGGCCATTCCATCGTGCACC ATGCGCAAGACGGTGGCGTGGTCACCGTGCGCGTAACGCGCCACGGCCCGGGAAGCGACAGCGAGGGCGGTGCGCAAGAT CTGCTGATCGAAGGCGATGCGCTCATCGGCGCCGACGGCCTGCGCAGCGGCACGCGCATGCGTTTGCTGGGTGAGACGCC CACGCGAGTCTCCGGCCACCTGGCCTACCGCGCCGTGGTGCGCCAGGACGCGCTGCCCCAGGCGCTGCGCAGCCAGCAGG TGACCGCCTGGCTGGGGCCGCGCCTGCACGTGGTGCAGTACCCGCTGCGCCGTGGCGAATTGCTGAACGTGGTGGCCATC CGCCACGGGCAGCCGCCGGCCGACCTCGATTCCTGGGACCATGGCGCCAACGCGGCCGATCTGGAGGCCGCGCTGGCCCA CACCTGCACGCCGCTGCAGGACTTGATTCGCGCCGTGCCGCAGGCGGGCAGCGGCTGGCGCCTGTGGCCGCTGCTGGACC GCCCGCCCGTCGCCGGCCCGCAAGAGATGGCGCAGGGCTTGGTGGCGTTGCTGGGCGACGCGGCGCACCCCATGCGGCCC TACCTGGCGCAAGGCGCCGGCATGGCCATCGAGGACGCGGCCGAGCTGCAGCGCGCCCTGGCCATGCACGACCTGGAAGT ACCGCTGCGCCTGCGCCGTTACGCGCTCAACCGCTGGCAGCGCAACGCGCGCGTGCAGGAGCGCTCGCGGCGCAACGGGC GCATCTTCCATGCCACGGGCCTCGTGCGCTGGGGGCGCGACACGGCGTTGCGGCTGCTGGGAGAGCGGCTGCTGGACGTG CCCTGGCTCTACCGGGGCGACGGCTCCAGCGCCAGCTCGCTATGA
Upstream 100 bases:
>100_bases GGCCCCAGGCGGTGCGATCTGGTCTGCGCGCCGTGGGATTGCGCCATGCCTGGTGCACCGCTGATAGCAGGGTGGCTGCC GGTGGGCGGACAATCGGTCC
Downstream 100 bases:
>100_bases ACGTGCGCTGGGGCAGTTCGCACCTGATGCTATTTAATTAATAGCTGTTTGCGCTTGTACCGTAAGCGATAGCGGCAGAT TTGACTGCTATCTTTCACCC
Product: FAD-binding monooxygenase
Products: NA
Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQSALQAVAAFPERLQVRSALT GAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRERTGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQD LLIEGDALIGADGLRSGTRMRLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGPQEMAQGLVALLGDAAHPMRP YLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQRNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDV PWLYRGDGSSASSL
Sequences:
>Translated_414_residues MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQSALQAVAAFPERLQVRSALT GAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRERTGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQD LLIEGDALIGADGLRSGTRMRLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGPQEMAQGLVALLGDAAHPMRP YLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQRNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDV PWLYRGDGSSASSL >Mature_414_residues MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQSALQAVAAFPERLQVRSALT GAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRERTGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQD LLIEGDALIGADGLRSGTRMRLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGPQEMAQGLVALLGDAAHPMRP YLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQRNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDV PWLYRGDGSSASSL
Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.24 [H]
Molecular weight: Translated: 44728; Mature: 44728
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQ CCCEEEEECCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCEECHHHHHHHHHHCHH SALQAVAAFPERLQVRSALTGAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRER HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHCCHHHEEEHHHHHHHHHHHHHHH TGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQDLLIEGDALIGADGLRSGTRM CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEECCCCCCCCCEE RLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCHHCCCEEEEEEE RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGP ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCH QEMAQGLVALLGDAAHPMRPYLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQ HHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDVPWLYRGDGSSASSL HHHHHHHHHCCCCEEEEECCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure MQKQVLIAGGGIGGLAAALGSSRAGWEVRLFERAAEFTELGAGVQIGPNVVRRLQAWGLQ CCCEEEEECCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCEECHHHHHHHHHHCHH SALQAVAAFPERLQVRSALTGAELAALRLGNTAIERYGAAYATIHRADLHGLLLDALRER HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHCCHHHEEEHHHHHHHHHHHHHHH TGVHLNLGHSIVHHAQDGGVVTVRVTRHGPGSDSEGGAQDLLIEGDALIGADGLRSGTRM CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEECCCCCCCCCEE RLLGETPTRVSGHLAYRAVVRQDALPQALRSQQVTAWLGPRLHVVQYPLRRGELLNVVAI EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCHHCCCEEEEEEE RHGQPPADLDSWDHGANAADLEAALAHTCTPLQDLIRAVPQAGSGWRLWPLLDRPPVAGP ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCH QEMAQGLVALLGDAAHPMRPYLAQGAGMAIEDAAELQRALAMHDLEVPLRLRRYALNRWQ HHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RNARVQERSRRNGRIFHATGLVRWGRDTALRLLGERLLDVPWLYRGDGSSASSL HHHHHHHHHCCCCEEEEECCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12909360 [H]