| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is echA8 [H]
Identifier: 222110209
GI number: 222110209
Start: 1036495
End: 1037298
Strand: Direct
Name: echA8 [H]
Synonym: Dtpsy_0995
Alternate gene names: 222110209
Gene position: 1036495-1037298 (Clockwise)
Preceding gene: 222110208
Following gene: 222110210
Centisome position: 27.3
GC content: 69.53
Gene sequence:
>804_bases ATGGCCGCAGGAGAGGCCGCCGGCCGCGGCGTGGTGCGCGTGACGCTGCGCCACGAGGGCCGGCTCAACGCCATGTCGCG CGCCATGTGGCGCCAGTTGCGCACGGTGTTCCAGGACATCCAGCGCAGCGATGGCGTGCGCTGCGTGCTCATCGAGGGGG CAGGGGAGGCGTTCTGTGCGGGGGGGGATATTTCCGAGTACCCCGCCTTTCGCTTCGACCCCGCGCAGCTGCGCGACTTC CACGAGAGCGATGTCTGGGGCGGGCTGGCGGCCATGCTGGACTGCGACGTACCCATCGTCGCGCGCATCGCAGGCGCCTG CATGGGCGCGGGCGTGGAGATCGCCAGCTGCTGCGACATCCGCATTGCCGCTGCCGGCGCGCGTTTCGGCGCGCCCATCG CCAAGCTGGGCTTTCCGATGGCGCCGCGCGAGGCTGCCTTGGTGGCGGGCGCCGTGGGCGACGTGACGGCGCGCCAGATG CTGTTGGAGGCGGCCACCTTCAGCGCCGCCGAGATGGCGCAGCGGGGCTTTCTGAGCCGCGTGGTCGACACCGAGCAGCT GGATGCGCAAGCCCTGGGCACGGCGCTGCGCATCGCAGCCTTGGCGCCCGGTGCGGCCCGGCTCAACAAGCAGACCTTGC GCGCTATACGGAAGAATGTGCCGCTAGCGCCCGACCAGCAAGCGCAAGCAGCTTCTGATTTGATAGCAAATAACGCACTG GCCGACCCCTACGCCTATGCCGACAGCGCCGAACACCGCGAGGGTATCAACGCCTTCCTGGCCAAGCGCGCTCCCGTTTT CTGA
Upstream 100 bases:
>100_bases CTGGAGTGATGTAGCCCCCCACTGCGGCGCCCCTCCAGTGGCGCCGCCTCCACCCCCACGAAGAGAGTCCGATCGCATGC CAGGTGAAGTTGTCGCGGCC
Downstream 100 bases:
>100_bases ATCCTTTGTGTGTGCACCACCATGAGCTCCTCCTCCCAGAACCTGTTTTCCGCGCTGCGCGCCGCCTTTCCTGCTGACCT GGACCAGACCGCCGTCGAGG
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAAGEAAGRGVVRVTLRHEGRLNAMSRAMWRQLRTVFQDIQRSDGVRCVLIEGAGEAFCAGGDISEYPAFRFDPAQLRDF HESDVWGGLAAMLDCDVPIVARIAGACMGAGVEIASCCDIRIAAAGARFGAPIAKLGFPMAPREAALVAGAVGDVTARQM LLEAATFSAAEMAQRGFLSRVVDTEQLDAQALGTALRIAALAPGAARLNKQTLRAIRKNVPLAPDQQAQAASDLIANNAL ADPYAYADSAEHREGINAFLAKRAPVF
Sequences:
>Translated_267_residues MAAGEAAGRGVVRVTLRHEGRLNAMSRAMWRQLRTVFQDIQRSDGVRCVLIEGAGEAFCAGGDISEYPAFRFDPAQLRDF HESDVWGGLAAMLDCDVPIVARIAGACMGAGVEIASCCDIRIAAAGARFGAPIAKLGFPMAPREAALVAGAVGDVTARQM LLEAATFSAAEMAQRGFLSRVVDTEQLDAQALGTALRIAALAPGAARLNKQTLRAIRKNVPLAPDQQAQAASDLIANNAL ADPYAYADSAEHREGINAFLAKRAPVF >Mature_266_residues AAGEAAGRGVVRVTLRHEGRLNAMSRAMWRQLRTVFQDIQRSDGVRCVLIEGAGEAFCAGGDISEYPAFRFDPAQLRDFH ESDVWGGLAAMLDCDVPIVARIAGACMGAGVEIASCCDIRIAAAGARFGAPIAKLGFPMAPREAALVAGAVGDVTARQML LEAATFSAAEMAQRGFLSRVVDTEQLDAQALGTALRIAALAPGAARLNKQTLRAIRKNVPLAPDQQAQAASDLIANNALA DPYAYADSAEHREGINAFLAKRAPVF
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=262, Percent_Identity=27.8625954198473, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI70995211, Length=227, Percent_Identity=27.7533039647577, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI194097323, Length=254, Percent_Identity=24.4094488188976, Blast_Score=72, Evalue=3e-13, Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI87082183, Length=252, Percent_Identity=26.1904761904762, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787659, Length=257, Percent_Identity=28.7937743190661, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788597, Length=267, Percent_Identity=26.9662921348315, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI221142681, Length=265, Percent_Identity=25.2830188679245, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17534483, Length=224, Percent_Identity=27.6785714285714, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25145438, Length=260, Percent_Identity=26.1538461538462, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17540306, Length=272, Percent_Identity=26.4705882352941, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17554946, Length=257, Percent_Identity=25.2918287937743, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17535521, Length=212, Percent_Identity=23.1132075471698, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17549921, Length=210, Percent_Identity=25.2380952380952, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24653139, Length=279, Percent_Identity=28.3154121863799, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI19920382, Length=214, Percent_Identity=25.7009345794392, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI20129971, Length=265, Percent_Identity=26.7924528301887, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24653477, Length=265, Percent_Identity=26.7924528301887, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 28152; Mature: 28020
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGEAAGRGVVRVTLRHEGRLNAMSRAMWRQLRTVFQDIQRSDGVRCVLIEGAGEAFCA CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEC GGDISEYPAFRFDPAQLRDFHESDVWGGLAAMLDCDVPIVARIAGACMGAGVEIASCCDI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCE RIAAAGARFGAPIAKLGFPMAPREAALVAGAVGDVTARQMLLEAATFSAAEMAQRGFLSR EEEECCCHHCCCHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVDTEQLDAQALGTALRIAALAPGAARLNKQTLRAIRKNVPLAPDQQAQAASDLIANNAL HHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC ADPYAYADSAEHREGINAFLAKRAPVF CCCHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AAGEAAGRGVVRVTLRHEGRLNAMSRAMWRQLRTVFQDIQRSDGVRCVLIEGAGEAFCA CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEC GGDISEYPAFRFDPAQLRDFHESDVWGGLAAMLDCDVPIVARIAGACMGAGVEIASCCDI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCE RIAAAGARFGAPIAKLGFPMAPREAALVAGAVGDVTARQMLLEAATFSAAEMAQRGFLSR EEEECCCHHCCCHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVDTEQLDAQALGTALRIAALAPGAARLNKQTLRAIRKNVPLAPDQQAQAASDLIANNAL HHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC ADPYAYADSAEHREGINAFLAKRAPVF CCCHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]