| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110208
Identifier: 222110208
GI number: 222110208
Start: 1035378
End: 1036403
Strand: Direct
Name: 222110208
Synonym: Dtpsy_0994
Alternate gene names: NA
Gene position: 1035378-1036403 (Clockwise)
Preceding gene: 222110207
Following gene: 222110209
Centisome position: 27.27
GC content: 68.13
Gene sequence:
>1026_bases ATGCGAGAGAGAGAGAACTTGAGCCAGATCGCCACCGCCACGCTGCAACGCCGTGACATGCTGCGCGCAGCCGGCGCTGC GGGCCTGGCGCTGGCCACGGGCGGTGCCTGGGCGCAAGGCGCCAGCGGCTGGCCGACCAAGCCGGTCAACATGGTGGTGC CGTTCCCCGCGGGCGGCGGCACGGATGCCTTTGCGCGCCCATTGGCTGCGCAGTTTGCCAAATCCACGGGCAAGACGCTG GTGATCGACAACCGCGGCGGCGCGGGCGGCACCGTGGGTGCCAGCGTGGCGGCCAAGGCGCCAGCCGATGGCTACAACCT GTTCATGGGTGGCGTGCACCATGTGATTGCACCGTCCATGTACCCCAAGCTGGACTACGACCTGGAAAAGGACTTCGTGC CGCTGGCCTTGGTGGCCAACGTGCCGCAGGTGCTGGTGGTGAACCCGCGCAACGTGACGGCCACCAACATGAAGCAGTTC ATGGACTTCGTGAAGGCCAACCCCGCCAAGCTGAACTATGCGTCGGCCGGCTCGGGCACCTCGCACCACCTGGCGGGCGA GCTGTTCAAGCTGCAGACGGGGACTTTCATCACCCACATCCCCTATCGCGGCGCGGGCCCTGCGCTGCAGGACCTGATCG GCGGCAACGTGGACATGCTGTTCGACGGCCTGGGCTCGTCGGCCTCGCACATCAAGGGCGGGCGCATCAAGGCGCTGATG GTGTCGGGCTCCAAGCGCAACCCGGCCTTCCCCGACGTGCCCTGCGCGGCAGAGGTGGGCCTGCCGGACTACACCGTGTC CACCTGGTATGGCCTGTGGGCGCCCAAGGGCACGCCGGCCGATCTGCAGGCGCGCATCGTCGAGGAGATCCGCAAGCTCG GCCAGGCCGAGGAGCTCAAGGCCATCTGGGCCGGCAACGGCGCGGAGTTCGGCACGCTGTCGCAGGCGGACTTCGCCAAG ATGGTCAGCAGCGAGATCAAGCGCTGGGCGCAGGTGGTGAAGGCCTCGGGCGCCAAGCTGGAGTGA
Upstream 100 bases:
>100_bases CGCGCCCAGCTGCCCTCGGCGGCCTTGGCCGAGCGGGCGCGCCGCGCCTGAGCACCTGCCAACCCACCCTTTTCACAACA GAAAGACAGGAGACAACGCC
Downstream 100 bases:
>100_bases TGTAGCCCCCCACTGCGGCGCCCCTCCAGTGGCGCCGCCTCCACCCCCACGAAGAGAGTCCGATCGCATGCCAGGTGAAG TTGTCGCGGCCATGGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MRERENLSQIATATLQRRDMLRAAGAAGLALATGGAWAQGASGWPTKPVNMVVPFPAGGGTDAFARPLAAQFAKSTGKTL VIDNRGGAGGTVGASVAAKAPADGYNLFMGGVHHVIAPSMYPKLDYDLEKDFVPLALVANVPQVLVVNPRNVTATNMKQF MDFVKANPAKLNYASAGSGTSHHLAGELFKLQTGTFITHIPYRGAGPALQDLIGGNVDMLFDGLGSSASHIKGGRIKALM VSGSKRNPAFPDVPCAAEVGLPDYTVSTWYGLWAPKGTPADLQARIVEEIRKLGQAEELKAIWAGNGAEFGTLSQADFAK MVSSEIKRWAQVVKASGAKLE
Sequences:
>Translated_341_residues MRERENLSQIATATLQRRDMLRAAGAAGLALATGGAWAQGASGWPTKPVNMVVPFPAGGGTDAFARPLAAQFAKSTGKTL VIDNRGGAGGTVGASVAAKAPADGYNLFMGGVHHVIAPSMYPKLDYDLEKDFVPLALVANVPQVLVVNPRNVTATNMKQF MDFVKANPAKLNYASAGSGTSHHLAGELFKLQTGTFITHIPYRGAGPALQDLIGGNVDMLFDGLGSSASHIKGGRIKALM VSGSKRNPAFPDVPCAAEVGLPDYTVSTWYGLWAPKGTPADLQARIVEEIRKLGQAEELKAIWAGNGAEFGTLSQADFAK MVSSEIKRWAQVVKASGAKLE >Mature_341_residues MRERENLSQIATATLQRRDMLRAAGAAGLALATGGAWAQGASGWPTKPVNMVVPFPAGGGTDAFARPLAAQFAKSTGKTL VIDNRGGAGGTVGASVAAKAPADGYNLFMGGVHHVIAPSMYPKLDYDLEKDFVPLALVANVPQVLVVNPRNVTATNMKQF MDFVKANPAKLNYASAGSGTSHHLAGELFKLQTGTFITHIPYRGAGPALQDLIGGNVDMLFDGLGSSASHIKGGRIKALM VSGSKRNPAFPDVPCAAEVGLPDYTVSTWYGLWAPKGTPADLQARIVEEIRKLGQAEELKAIWAGNGAEFGTLSQADFAK MVSSEIKRWAQVVKASGAKLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35773; Mature: 35773
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERENLSQIATATLQRRDMLRAAGAAGLALATGGAWAQGASGWPTKPVNMVVPFPAGGG CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC TDAFARPLAAQFAKSTGKTLVIDNRGGAGGTVGASVAAKAPADGYNLFMGGVHHVIAPSM CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCC YPKLDYDLEKDFVPLALVANVPQVLVVNPRNVTATNMKQFMDFVKANPAKLNYASAGSGT CCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC SHHLAGELFKLQTGTFITHIPYRGAGPALQDLIGGNVDMLFDGLGSSASHIKGGRIKALM CHHHHHHHEEEECCCEEEECCCCCCCHHHHHHHCCCHHEEECCCCCCCHHCCCCEEEEEE VSGSKRNPAFPDVPCAAEVGLPDYTVSTWYGLWAPKGTPADLQARIVEEIRKLGQAEELK EECCCCCCCCCCCCCHHHCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHH AIWAGNGAEFGTLSQADFAKMVSSEIKRWAQVVKASGAKLE HEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRERENLSQIATATLQRRDMLRAAGAAGLALATGGAWAQGASGWPTKPVNMVVPFPAGGG CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC TDAFARPLAAQFAKSTGKTLVIDNRGGAGGTVGASVAAKAPADGYNLFMGGVHHVIAPSM CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCC YPKLDYDLEKDFVPLALVANVPQVLVVNPRNVTATNMKQFMDFVKANPAKLNYASAGSGT CCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC SHHLAGELFKLQTGTFITHIPYRGAGPALQDLIGGNVDMLFDGLGSSASHIKGGRIKALM CHHHHHHHEEEECCCEEEECCCCCCCHHHHHHHCCCHHEEECCCCCCCHHCCCCEEEEEE VSGSKRNPAFPDVPCAAEVGLPDYTVSTWYGLWAPKGTPADLQARIVEEIRKLGQAEELK EECCCCCCCCCCCCCHHHCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHH AIWAGNGAEFGTLSQADFAKMVSSEIKRWAQVVKASGAKLE HEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]