| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110203
Identifier: 222110203
GI number: 222110203
Start: 1030931
End: 1031359
Strand: Direct
Name: 222110203
Synonym: Dtpsy_0989
Alternate gene names: NA
Gene position: 1030931-1031359 (Clockwise)
Preceding gene: 222110202
Following gene: 222110205
Centisome position: 27.15
GC content: 67.6
Gene sequence:
>429_bases ATGAACGAGTTCCAGCAACGCATCGCAGCCAGCTTCGCGGCACAAGGTTTGATGGCCACCCTCGGCGCCCGGCTGGCGCT GGTGGTGGAGGGTGAGGTGCATATCGAGATGCCGTTTTCCACCCACCTGTCGCAGCAGCAGGGCTTCGTGCACGCCGGGG CCATCACCAGCATCGTGGACAGCGCCTGCGGCTACGCGGCGCTGACCCGCTCGCCCCCCGGCTGCGAGATCGTCACGGCC GAATTCAAGACCAACTTCATGCGGCCCGCCATGGGGACGCGCTTCCTGGCCGTGGGCAAGGTGCAAAACGCCGGGCGCAT GCTCACCGTGTGCACCGGCGAAGTGCGCGCGTACACGGGCGACGGGCCCGACTACAAGGTGGTGGCGTTGATGCAGGCCA CCATGGTCAACGTGCCGGCCGGCGCCTGA
Upstream 100 bases:
>100_bases GCGCTGGATGGAAGCAATTTAGAGGGGCATTTGAGCTTCAAATGTCCGTACGGCCAGCGCCAACAGCTCTTTTTGTTGTA GCAACGGAATGCCATCGCCC
Downstream 100 bases:
>100_bases GAGCGCCGCAGCCTCACGAGCCCGAAGGGCCGCCCGCCTGGGTCTGCAGGTAGTTGGGCAGGCCGATCTTCTCGATCAGG CCGAGCTGCTTTTCCAGCCA
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation Protein PAAI; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Phenylacetic Acid Degradation-Like Protein; Phenylacetic Acid Degradation Protein PaaD
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNEFQQRIAASFAAQGLMATLGARLALVVEGEVHIEMPFSTHLSQQQGFVHAGAITSIVDSACGYAALTRSPPGCEIVTA EFKTNFMRPAMGTRFLAVGKVQNAGRMLTVCTGEVRAYTGDGPDYKVVALMQATMVNVPAGA
Sequences:
>Translated_142_residues MNEFQQRIAASFAAQGLMATLGARLALVVEGEVHIEMPFSTHLSQQQGFVHAGAITSIVDSACGYAALTRSPPGCEIVTA EFKTNFMRPAMGTRFLAVGKVQNAGRMLTVCTGEVRAYTGDGPDYKVVALMQATMVNVPAGA >Mature_142_residues MNEFQQRIAASFAAQGLMATLGARLALVVEGEVHIEMPFSTHLSQQQGFVHAGAITSIVDSACGYAALTRSPPGCEIVTA EFKTNFMRPAMGTRFLAVGKVQNAGRMLTVCTGEVRAYTGDGPDYKVVALMQATMVNVPAGA
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14998; Mature: 14998
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFQQRIAASFAAQGLMATLGARLALVVEGEVHIEMPFSTHLSQQQGFVHAGAITSIVD CCHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEEECCHHHCCHHHCCEEEHHHHHHHHH SACGYAALTRSPPGCEIVTAEFKTNFMRPAMGTRFLAVGKVQNAGRMLTVCTGEVRAYTG HHCCCEEECCCCCCCEEEEEEHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEEEEC DGPDYKVVALMQATMVNVPAGA CCCCEEEEEEEEHHHCCCCCCC >Mature Secondary Structure MNEFQQRIAASFAAQGLMATLGARLALVVEGEVHIEMPFSTHLSQQQGFVHAGAITSIVD CCHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEEECCHHHCCHHHCCEEEHHHHHHHHH SACGYAALTRSPPGCEIVTAEFKTNFMRPAMGTRFLAVGKVQNAGRMLTVCTGEVRAYTG HHCCCEEECCCCCCCEEEEEEHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEEEEC DGPDYKVVALMQATMVNVPAGA CCCCEEEEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA