Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222110116

Identifier: 222110116

GI number: 222110116

Start: 925315

End: 926277

Strand: Direct

Name: 222110116

Synonym: Dtpsy_0902

Alternate gene names: NA

Gene position: 925315-926277 (Clockwise)

Preceding gene: 222110114

Following gene: 222110117

Centisome position: 24.37

GC content: 65.63

Gene sequence:

>963_bases
ATGCAACGTCGCAACCTGCTGGCTTTGGCGCTGGCGGCCACCGCGGGCACCGCCTTCGCCCAGGGCTACCCCAACAAGCC
CGTCAAGCTGCTGGTGCCCTTCGCGCCCGGCGGCACCACCGACATCATCGCCCGCGTGATCGCCGACCCACTGTCGCGCG
CGCTCGGCCAGTCGGTGGTGGTGGAGAACCGGGGCGGCGGCGGCGGCGTGATTGGCGCGCAGGAAACGGCGCGCGCAGCA
CCCGATGGGTACAACCTGGGCGTGGCCACCGTGTCCACCACGGCGGCCAATCCGGCCATCAACTCCAAGATCCCGTACAA
CCCGATCACGGACTTCACGCCCATCATCAACATCGCGGCCACGCCCAACATCATCGCGGTGCACCCCAGCTTTCCGGCCA
AGGACTACAAGTCCTTCCTGGCGGAGATCCAGAAGAACCCCGGCAAGTACTCGTACGCGTCCTCGGGCACAGGCGGCATC
GGCCACCTGCTGATGGAGTTGTACAAGAGCCTCACCAACAGCTTCGTCACGCACATTCCCTACCGCGGCGCGGGTCCGGC
CCTCAACGACACCGTGGCGGGTCAGGTGCCCATCATCTTCGACAACCTGCCCTCGGCGCTGCCCTTCATCAAGAGCGGCA
AGCTCGTGCCCATCGTGGTGTCCGCGCCGCAGCGCGTGGCGGCACTGCCCAATGTGCCCACGTTCAAGGAAGTGGGCCTG
GAGCCGGTGAACCGCATGGCCTACTACGGCATCCTGGGCCCCAAGAACCTGCCCAAGGACGTGGTGGACAAGATCAACGG
CGGCGTGAAGAAGGCGCTGGAAGATGCCGCCGTGCGCAAGCGCATCGAGGACACCGACTCGATCATCGTCGCCAACACGC
CCGAGCAGTTCGCCGAGCAGATCAAGGCCGAGTTCGGCGTGTACAAGCAGGTGGTGCAAAAGCAGAAGCTCACGCTGGAA
TAA

Upstream 100 bases:

>100_bases
TCAGCGCGGCGCCCGCGGTGGTCAAAGCGGCATGGCACCGTAGGATCGCCGCCTACCCCCTGTTTTTTCCACCAAACACA
ATTTGATGAGGAGATTTCGC

Downstream 100 bases:

>100_bases
GCGCGCCCCCAGCCCTCTGAAAAACGCCCGCCTGCCGCGGGCGTTTTTTTGATGCTATGGTTTTCGCCATGTTGCCCGAC
AGCCAGAACGCCATAGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVVVENRGGGGGVIGAQETARAA
PDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAATPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGI
GHLLMELYKSLTNSFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL
EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQIKAEFGVYKQVVQKQKLTLE

Sequences:

>Translated_320_residues
MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVVVENRGGGGGVIGAQETARAA
PDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAATPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGI
GHLLMELYKSLTNSFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL
EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQIKAEFGVYKQVVQKQKLTLE
>Mature_320_residues
MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVVVENRGGGGGVIGAQETARAA
PDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAATPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGI
GHLLMELYKSLTNSFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL
EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQIKAEFGVYKQVVQKQKLTLE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33821; Mature: 33821

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVV
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEE
VENRGGGGGVIGAQETARAAPDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAA
EEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEC
TPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGIGHLLMELYKSLTNSFVTHIP
CCCEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
YRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL
CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEEEECCCHHHHCCCCCCCHHHHCC
EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQ
CHHHHHHEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
IKAEFGVYKQVVQKQKLTLE
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVV
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEE
VENRGGGGGVIGAQETARAAPDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAA
EEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEC
TPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGIGHLLMELYKSLTNSFVTHIP
CCCEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
YRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL
CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEEEECCCHHHHCCCCCCCHHHHCC
EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQ
CHHHHHHEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
IKAEFGVYKQVVQKQKLTLE
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]