| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110116
Identifier: 222110116
GI number: 222110116
Start: 925315
End: 926277
Strand: Direct
Name: 222110116
Synonym: Dtpsy_0902
Alternate gene names: NA
Gene position: 925315-926277 (Clockwise)
Preceding gene: 222110114
Following gene: 222110117
Centisome position: 24.37
GC content: 65.63
Gene sequence:
>963_bases ATGCAACGTCGCAACCTGCTGGCTTTGGCGCTGGCGGCCACCGCGGGCACCGCCTTCGCCCAGGGCTACCCCAACAAGCC CGTCAAGCTGCTGGTGCCCTTCGCGCCCGGCGGCACCACCGACATCATCGCCCGCGTGATCGCCGACCCACTGTCGCGCG CGCTCGGCCAGTCGGTGGTGGTGGAGAACCGGGGCGGCGGCGGCGGCGTGATTGGCGCGCAGGAAACGGCGCGCGCAGCA CCCGATGGGTACAACCTGGGCGTGGCCACCGTGTCCACCACGGCGGCCAATCCGGCCATCAACTCCAAGATCCCGTACAA CCCGATCACGGACTTCACGCCCATCATCAACATCGCGGCCACGCCCAACATCATCGCGGTGCACCCCAGCTTTCCGGCCA AGGACTACAAGTCCTTCCTGGCGGAGATCCAGAAGAACCCCGGCAAGTACTCGTACGCGTCCTCGGGCACAGGCGGCATC GGCCACCTGCTGATGGAGTTGTACAAGAGCCTCACCAACAGCTTCGTCACGCACATTCCCTACCGCGGCGCGGGTCCGGC CCTCAACGACACCGTGGCGGGTCAGGTGCCCATCATCTTCGACAACCTGCCCTCGGCGCTGCCCTTCATCAAGAGCGGCA AGCTCGTGCCCATCGTGGTGTCCGCGCCGCAGCGCGTGGCGGCACTGCCCAATGTGCCCACGTTCAAGGAAGTGGGCCTG GAGCCGGTGAACCGCATGGCCTACTACGGCATCCTGGGCCCCAAGAACCTGCCCAAGGACGTGGTGGACAAGATCAACGG CGGCGTGAAGAAGGCGCTGGAAGATGCCGCCGTGCGCAAGCGCATCGAGGACACCGACTCGATCATCGTCGCCAACACGC CCGAGCAGTTCGCCGAGCAGATCAAGGCCGAGTTCGGCGTGTACAAGCAGGTGGTGCAAAAGCAGAAGCTCACGCTGGAA TAA
Upstream 100 bases:
>100_bases TCAGCGCGGCGCCCGCGGTGGTCAAAGCGGCATGGCACCGTAGGATCGCCGCCTACCCCCTGTTTTTTCCACCAAACACA ATTTGATGAGGAGATTTCGC
Downstream 100 bases:
>100_bases GCGCGCCCCCAGCCCTCTGAAAAACGCCCGCCTGCCGCGGGCGTTTTTTTGATGCTATGGTTTTCGCCATGTTGCCCGAC AGCCAGAACGCCATAGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVVVENRGGGGGVIGAQETARAA PDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAATPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGI GHLLMELYKSLTNSFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQIKAEFGVYKQVVQKQKLTLE
Sequences:
>Translated_320_residues MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVVVENRGGGGGVIGAQETARAA PDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAATPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGI GHLLMELYKSLTNSFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQIKAEFGVYKQVVQKQKLTLE >Mature_320_residues MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVVVENRGGGGGVIGAQETARAA PDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAATPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGI GHLLMELYKSLTNSFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQIKAEFGVYKQVVQKQKLTLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33821; Mature: 33821
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVV CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEE VENRGGGGGVIGAQETARAAPDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAA EEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEC TPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGIGHLLMELYKSLTNSFVTHIP CCCEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC YRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEEEECCCHHHHCCCCCCCHHHHCC EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQ CHHHHHHEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH IKAEFGVYKQVVQKQKLTLE HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQRRNLLALALAATAGTAFAQGYPNKPVKLLVPFAPGGTTDIIARVIADPLSRALGQSVV CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEE VENRGGGGGVIGAQETARAAPDGYNLGVATVSTTAANPAINSKIPYNPITDFTPIINIAA EEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEC TPNIIAVHPSFPAKDYKSFLAEIQKNPGKYSYASSGTGGIGHLLMELYKSLTNSFVTHIP CCCEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC YRGAGPALNDTVAGQVPIIFDNLPSALPFIKSGKLVPIVVSAPQRVAALPNVPTFKEVGL CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEEEECCCHHHHCCCCCCCHHHHCC EPVNRMAYYGILGPKNLPKDVVDKINGGVKKALEDAAVRKRIEDTDSIIVANTPEQFAEQ CHHHHHHEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH IKAEFGVYKQVVQKQKLTLE HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]