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The map label for this gene is nuoJ [H]

Identifier: 222110095

GI number: 222110095

Start: 904994

End: 905659

Strand: Direct

Name: nuoJ [H]

Synonym: Dtpsy_0881

Alternate gene names: 222110095

Gene position: 904994-905659 (Clockwise)

Preceding gene: 222110094

Following gene: 222110096

Centisome position: 23.84

GC content: 60.21

Gene sequence:

>666_bases
ATGGACGCCAAAACCGGTTTCTTCTACTTGTTCTCGGTAGTGCTGCTGTACGCGGCCTTCCGGGTCATCACGGCGCGCAA
CCCCGTGCATGCCGTGCTGCATCTGATTCTTGCCTTCTCGCAGGCCGCCGGCGTGTGGTTTCTGCTGAAGGCGGAATTCC
TCGCCATCACGCTGGTGCTCGTCTACCTGGGCGCCGTGATGGTGCTGTTCCTCTTTGTCGTGATGATGCTGGACATCCGC
ATCGATACCGTGCGACGCGGTTTCTGGAAGCACTTTCCTTTGGCGGCATTCATCGGTGCCCTGGTGGCATTCGAGATGGC
CGCTGTGCTCATGACTGGTTTTCGCGGCATCGAAGAGCCCAAGGCCGTTGAAGTGCTGGTGAATGCTGCGGGGCAGGTGG
TGCCTTACTCGAACACCAAAGCCTTGGGCAAACTGCTCTACACAGAGTACCTGTACCCCGTTGAAGTGGCTGCGGTGATC
CTGCTGGTGGCCATGATTGCAGCCATCGCCCTGACCTTGCGCCAGCGCAAGGACTCCAAGGCCATTGACCCTTCGGAGCA
GGTGCGCGTGCGTGCCCGTGATCGCCTTGTCATGGTCCAGTTGCCCGTCACGCAGCAGGCCGCTGCGCCAGCAGTCCCCG
AGTCTGCAGAGGAGAAGAAGCAATGA

Upstream 100 bases:

>100_bases
ACCGCTACGAGCCCGAGATCGCAGCCGCCAAGGCGGCGGACGCCAAGTACCGTTGATCGGGTTGCCTCACCGCACCTGAC
TTTTTGAAAAGACCCGATTC

Downstream 100 bases:

>100_bases
CATTGACTCTGGGTCACTTTCTCTCGCTAGGCGCCATGCTGTTCGCCCTGGCGGTGATTGGCATCTTCCTGAACCGTAAG
AACCTCATCGTCCTGCTCAT

Product: NADH-ubiquinone/plastoquinone oxidoreductase chain 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWFLLKAEFLAITLVLVYLGAVMVLFLFVVMMLDIR
IDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGIEEPKAVEVLVNAAGQVVPYSNTKALGKLLYTEYLYPVEVAAVI
LLVAMIAAIALTLRQRKDSKAIDPSEQVRVRARDRLVMVQLPVTQQAAAPAVPESAEEKKQ

Sequences:

>Translated_221_residues
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWFLLKAEFLAITLVLVYLGAVMVLFLFVVMMLDIR
IDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGIEEPKAVEVLVNAAGQVVPYSNTKALGKLLYTEYLYPVEVAAVI
LLVAMIAAIALTLRQRKDSKAIDPSEQVRVRARDRLVMVQLPVTQQAAAPAVPESAEEKKQ
>Mature_221_residues
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWFLLKAEFLAITLVLVYLGAVMVLFLFVVMMLDIR
IDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGIEEPKAVEVLVNAAGQVVPYSNTKALGKLLYTEYLYPVEVAAVI
LLVAMIAAIALTLRQRKDSKAIDPSEQVRVRARDRLVMVQLPVTQQAAAPAVPESAEEKKQ

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=192, Percent_Identity=32.2916666666667, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 24426; Mature: 24426

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWFLLKAEFLAITLVL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VYLGAVMVLFLFVVMMLDIRIDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGIEEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
KAVEVLVNAAGQVVPYSNTKALGKLLYTEYLYPVEVAAVILLVAMIAAIALTLRQRKDSK
HHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AIDPSEQVRVRARDRLVMVQLPVTQQAAAPAVPESAEEKKQ
CCCCHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure
MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWFLLKAEFLAITLVL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VYLGAVMVLFLFVVMMLDIRIDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGIEEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
KAVEVLVNAAGQVVPYSNTKALGKLLYTEYLYPVEVAAVILLVAMIAAIALTLRQRKDSK
HHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AIDPSEQVRVRARDRLVMVQLPVTQQAAAPAVPESAEEKKQ
CCCCHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]