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The map label for this gene is ccsA [H]

Identifier: 222109907

GI number: 222109907

Start: 719257

End: 720591

Strand: Direct

Name: ccsA [H]

Synonym: Dtpsy_0692

Alternate gene names: 222109907

Gene position: 719257-720591 (Clockwise)

Preceding gene: 222109906

Following gene: 222109908

Centisome position: 18.94

GC content: 62.4

Gene sequence:

>1335_bases
ATGAATACAGCCACGACCACGCTCACGTTGAGCGAAGGGTATTTCGCACGCCGCAGCTGGTGGGACTGGCTGTTTGCGTT
GTTGGTGGTCGCGGGGGGCGTGTTCGCGCTGCAGCGCTATGCGGCGTACATGGATGTGTATGAGAAGGCCATTTTGCTGG
GCTCCATTCCCAGCGCGATCTGGCTGGGCTGGTTCTGGCGCCCGCTGAGCACACTGATGCTGATGGTGGCCGCGTGCTCG
CTGCTGGCCATCGGGCTGTACCAGAACAATGGCGCGGGCGACCTGGCGCGCGCGGACACGATCTTCGGACTCAAGTACTT
TCTGTCGAGCCAGTCGGCCATCCTGTGGATGAGCATGCTGTTCTTCATGAGCACCGCGTTCTATTGGGTGGGCATGCTCT
CGCGCGGTCAAGGGCAGACGATGATGCGCATCGGCTCGCGCATTGCGTGGGTGGCCGTGGCGCTGGCATTGATCGGCACC
ATGGTGCGCTGGTACGAAAGCTACCAGATCGGCCCGGATATCGGCCACATCCCGGTGAGCAACCTCTACGAGGTGTTCGT
CATGTTCTGCTGGATGACGGCCGTGTTCTACCTGTACTACGAGGAGCAGTACGAAACCCGCGCGCTCGGCGGCTTCGTGA
TGCTGGTGGTGAGCGCCGCCGTGGGCTTTCTGTTGTGGTACACGGTCGTGCGCGAGGCACATGAGATCCAGCCGCTGGTG
CCCGCGCTCAAGAGCTGGTGGATGAAGCTGCATGTGCCGGCCAACTTCATCGGCTACGGCACCTTCGCGCTGTCGGCCAT
GGTGGCCTTTGCCTACCTGATCAAACAGCAGGCGAGCGAAACGCGCTGGTGGAAACTGACACCGCTGTGGCTGTTGGGCG
TGGTGCTGTGCTTTGAGCCCATCGTCTTTCGCCAGGGTGCGGCCGACAACGGCGGTGGCTACTGGATGGTGTATTTCGGT
GTTTCTGCGCTGATCGTGGCGGGCATCTTGTTGGCGCGCCGGCGCATTGCCGAGCGGTTGCCGTCCTTCGAGATCCTGGA
CGATGTGATGTACAAGTCCATCGCCGTGGGCTTTGCGTTCTTTACCATCGCCACGGTCCTGGGAGCGCTGTGGGCCGCGG
AGGCCTGGGGCGGTTACTGGAGCTGGGACCCCAAGGAAACCTGGGCGCTGATCGTGTGGCTCAACTACGCGGCATGGCTG
CACATGCGGCTGATGAAGGGTTTGCGCGGCACAATGTCGGCGTGGTGGGCGCTGGTGGGCCTGGCGGTGACCACCTTCGC
CTTTCTGGGCGTGAACATGTTCCTGAGCGGGCTGCACAGCTACGGAACCTTGTAA

Upstream 100 bases:

>100_bases
CGATGGCGCTGTCCACCAACCGCAAGACGCTGGACGCGGATCGTGAATTCGCGCAGCTCACCACCCAATTGATCGGAACA
TCCCCGCACGGAGGTGCCTC

Downstream 100 bases:

>100_bases
CCCTCGGCGTCCAAGGGGGGAACCTGCGGGCCCTGCGGGCAGTCTGTGTCTCATGCAGACTGTGGCAGATGCGGCTGCCA
GAAGGACCCCCATGTTGATT

Product: cytochrome c-type biogenesis protein ccsb

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNTATTTLTLSEGYFARRSWWDWLFALLVVAGGVFALQRYAAYMDVYEKAILLGSIPSAIWLGWFWRPLSTLMLMVAACS
LLAIGLYQNNGAGDLARADTIFGLKYFLSSQSAILWMSMLFFMSTAFYWVGMLSRGQGQTMMRIGSRIAWVAVALALIGT
MVRWYESYQIGPDIGHIPVSNLYEVFVMFCWMTAVFYLYYEEQYETRALGGFVMLVVSAAVGFLLWYTVVREAHEIQPLV
PALKSWWMKLHVPANFIGYGTFALSAMVAFAYLIKQQASETRWWKLTPLWLLGVVLCFEPIVFRQGAADNGGGYWMVYFG
VSALIVAGILLARRRIAERLPSFEILDDVMYKSIAVGFAFFTIATVLGALWAAEAWGGYWSWDPKETWALIVWLNYAAWL
HMRLMKGLRGTMSAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL

Sequences:

>Translated_444_residues
MNTATTTLTLSEGYFARRSWWDWLFALLVVAGGVFALQRYAAYMDVYEKAILLGSIPSAIWLGWFWRPLSTLMLMVAACS
LLAIGLYQNNGAGDLARADTIFGLKYFLSSQSAILWMSMLFFMSTAFYWVGMLSRGQGQTMMRIGSRIAWVAVALALIGT
MVRWYESYQIGPDIGHIPVSNLYEVFVMFCWMTAVFYLYYEEQYETRALGGFVMLVVSAAVGFLLWYTVVREAHEIQPLV
PALKSWWMKLHVPANFIGYGTFALSAMVAFAYLIKQQASETRWWKLTPLWLLGVVLCFEPIVFRQGAADNGGGYWMVYFG
VSALIVAGILLARRRIAERLPSFEILDDVMYKSIAVGFAFFTIATVLGALWAAEAWGGYWSWDPKETWALIVWLNYAAWL
HMRLMKGLRGTMSAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL
>Mature_444_residues
MNTATTTLTLSEGYFARRSWWDWLFALLVVAGGVFALQRYAAYMDVYEKAILLGSIPSAIWLGWFWRPLSTLMLMVAACS
LLAIGLYQNNGAGDLARADTIFGLKYFLSSQSAILWMSMLFFMSTAFYWVGMLSRGQGQTMMRIGSRIAWVAVALALIGT
MVRWYESYQIGPDIGHIPVSNLYEVFVMFCWMTAVFYLYYEEQYETRALGGFVMLVVSAAVGFLLWYTVVREAHEIQPLV
PALKSWWMKLHVPANFIGYGTFALSAMVAFAYLIKQQASETRWWKLTPLWLLGVVLCFEPIVFRQGAADNGGGYWMVYFG
VSALIVAGILLARRRIAERLPSFEILDDVMYKSIAVGFAFFTIATVLGALWAAEAWGGYWSWDPKETWALIVWLNYAAWL
HMRLMKGLRGTMSAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 50186; Mature: 50186

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA