Click here to switch to the map view.

The map label for this gene is bphP [H]

Identifier: 222109845

GI number: 222109845

Start: 650036

End: 651184

Strand: Direct

Name: bphP [H]

Synonym: Dtpsy_0629

Alternate gene names: 222109845

Gene position: 650036-651184 (Clockwise)

Preceding gene: 222109844

Following gene: 222109848

Centisome position: 17.12

GC content: 68.06

Gene sequence:

>1149_bases
GTGATTTTTGCCCCACCGGCTGCACAGCCCGCGAGTCATCGGACCGGCGCGTGCGTGAAATGCCTGATCGTGGATGACGT
TCCTGAAAACCTCGTCGCATTGCAGGCGCTCTTGAAGGATGAGGACGTCGAGATCCTCATGGCCGGCTCCGGCGCCCAGG
CGCTGGAGCTGCTGCTGGCCCACAACGACGTGGCGCTGGCGCTGCTGGACGTGCAAATGCCCGAGATGAACGGTTTCGAA
CTGGCGGAGTTGATCCGCGGCAGCGAGCGCACGCGGCACATTCCGCTCATCTTCATCACCGCCGGCTCGCGGGACCAGGG
CTGGCAGTTCCGCGGCTACGAAAAAGGTGCGGTGGACTTCCTCTACAAACCCGTCGACCCCCACATGCTGGTCAACAAGG
CCCGGGTGTTCTTCGACCTGCAGCGCCAGCGGCATGCGCTGGCACGCGAGCTGCAGGAGCGCACCGAGGCGTTGTACATC
AACGAGATGTTAATGGCCGTGCTCAGCCACGATCTGCGCAGCCCGCTCAGCGCCATCATGGCCGTGGCCAGTGCGCTGCA
GCGCGCTCCCGAGCCCGCCAAGGTGCAGGCTCTGGCGTGCAACGTGCAGCAGGCCGGGCGACGCATGGGCCGCATGATCG
AGGACCTGTTGGATGTGACGCGCGCCCGCCAGCATGGCAGGCTGGCCATCGAGCCTGCACCCATGGACCTGGGGCAGCAG
GCGCAGCGCGTGGTGCAGGAAGTCCGCGCCGGCCACCCCGAGCGCCACCTGCGGCTTGAGCAGCAAGGGGATCTGCGCGG
CGAGTGGGACGAAGAGCGCCTGGGCCAGATGCTGGCGAACCTGCTGGGCAACGCCATGCACCACGGCACGCCCGACCAGC
CGGTGGAGTTGTCACTGGACGGCGCCGCCGCCGATACCGTGGTGCTGCGCGTGAGCAACGGCGGCGGGATTGACGCCGAA
CTGCTGCCCCGGCTGTTCGCGCCATTCACCGGCCGGCGCAACCGGGCCGGTCAATACCAGGGGTTGGGGCTGGGGTTGTT
CATCGTGCACCAGATCGTGCAGGCCCATGGCGGGACGATCGACGCCGCCTCGCAGGCGGGGCGCACCTGCTTCACGGTGA
CGCTGCCGCGGCGCGCGGTGGCGGCTTGA

Upstream 100 bases:

>100_bases
CCATGCCGCAGGCGGCGCTGGCCCTGATCCAACCCGATCAGGTGCTTCCCCCGGCACGCATCGCCGCGCTGTTGACCACC
TTGCATAAGGAGGGACTTTC

Downstream 100 bases:

>100_bases
CAGGACGGGGGCGGGGGGATGCCGGGCCTTCAGCGGCCCGGCAGGTGCCGCCTCAGGCGGGGCTGGCGCTTTGCAGGTGG
CTGGCGATCACGTCCAGCAA

Product: response regulator receiver sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MIFAPPAAQPASHRTGACVKCLIVDDVPENLVALQALLKDEDVEILMAGSGAQALELLLAHNDVALALLDVQMPEMNGFE
LAELIRGSERTRHIPLIFITAGSRDQGWQFRGYEKGAVDFLYKPVDPHMLVNKARVFFDLQRQRHALARELQERTEALYI
NEMLMAVLSHDLRSPLSAIMAVASALQRAPEPAKVQALACNVQQAGRRMGRMIEDLLDVTRARQHGRLAIEPAPMDLGQQ
AQRVVQEVRAGHPERHLRLEQQGDLRGEWDEERLGQMLANLLGNAMHHGTPDQPVELSLDGAAADTVVLRVSNGGGIDAE
LLPRLFAPFTGRRNRAGQYQGLGLGLFIVHQIVQAHGGTIDAASQAGRTCFTVTLPRRAVAA

Sequences:

>Translated_382_residues
MIFAPPAAQPASHRTGACVKCLIVDDVPENLVALQALLKDEDVEILMAGSGAQALELLLAHNDVALALLDVQMPEMNGFE
LAELIRGSERTRHIPLIFITAGSRDQGWQFRGYEKGAVDFLYKPVDPHMLVNKARVFFDLQRQRHALARELQERTEALYI
NEMLMAVLSHDLRSPLSAIMAVASALQRAPEPAKVQALACNVQQAGRRMGRMIEDLLDVTRARQHGRLAIEPAPMDLGQQ
AQRVVQEVRAGHPERHLRLEQQGDLRGEWDEERLGQMLANLLGNAMHHGTPDQPVELSLDGAAADTVVLRVSNGGGIDAE
LLPRLFAPFTGRRNRAGQYQGLGLGLFIVHQIVQAHGGTIDAASQAGRTCFTVTLPRRAVAA
>Mature_382_residues
MIFAPPAAQPASHRTGACVKCLIVDDVPENLVALQALLKDEDVEILMAGSGAQALELLLAHNDVALALLDVQMPEMNGFE
LAELIRGSERTRHIPLIFITAGSRDQGWQFRGYEKGAVDFLYKPVDPHMLVNKARVFFDLQRQRHALARELQERTEALYI
NEMLMAVLSHDLRSPLSAIMAVASALQRAPEPAKVQALACNVQQAGRRMGRMIEDLLDVTRARQHGRLAIEPAPMDLGQQ
AQRVVQEVRAGHPERHLRLEQQGDLRGEWDEERLGQMLANLLGNAMHHGTPDQPVELSLDGAAADTVVLRVSNGGGIDAE
LLPRLFAPFTGRRNRAGQYQGLGLGLFIVHQIVQAHGGTIDAASQAGRTCFTVTLPRRAVAA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=240, Percent_Identity=30.8333333333333, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI145693157, Length=229, Percent_Identity=30.1310043668122, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1786783, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788393, Length=244, Percent_Identity=30.7377049180328, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788713, Length=244, Percent_Identity=24.5901639344262, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786600, Length=336, Percent_Identity=22.9166666666667, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41861; Mature: 41861

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFAPPAAQPASHRTGACVKCLIVDDVPENLVALQALLKDEDVEILMAGSGAQALELLLA
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
HNDVALALLDVQMPEMNGFELAELIRGSERTRHIPLIFITAGSRDQGWQFRGYEKGAVDF
CCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCHHE
LYKPVDPHMLVNKARVFFDLQRQRHALARELQERTEALYINEMLMAVLSHDLRSPLSAIM
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVASALQRAPEPAKVQALACNVQQAGRRMGRMIEDLLDVTRARQHGRLAIEPAPMDLGQQ
HHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
AQRVVQEVRAGHPERHLRLEQQGDLRGEWDEERLGQMLANLLGNAMHHGTPDQPVELSLD
HHHHHHHHHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GAAADTVVLRVSNGGGIDAELLPRLFAPFTGRRNRAGQYQGLGLGLFIVHQIVQAHGGTI
CCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE
DAASQAGRTCFTVTLPRRAVAA
ECHHHCCCEEEEEECCCHHHCC
>Mature Secondary Structure
MIFAPPAAQPASHRTGACVKCLIVDDVPENLVALQALLKDEDVEILMAGSGAQALELLLA
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
HNDVALALLDVQMPEMNGFELAELIRGSERTRHIPLIFITAGSRDQGWQFRGYEKGAVDF
CCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCHHE
LYKPVDPHMLVNKARVFFDLQRQRHALARELQERTEALYINEMLMAVLSHDLRSPLSAIM
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVASALQRAPEPAKVQALACNVQQAGRRMGRMIEDLLDVTRARQHGRLAIEPAPMDLGQQ
HHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
AQRVVQEVRAGHPERHLRLEQQGDLRGEWDEERLGQMLANLLGNAMHHGTPDQPVELSLD
HHHHHHHHHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GAAADTVVLRVSNGGGIDAELLPRLFAPFTGRRNRAGQYQGLGLGLFIVHQIVQAHGGTI
CCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE
DAASQAGRTCFTVTLPRRAVAA
ECHHHCCCEEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]