| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is gltJ [H]
Identifier: 222109805
GI number: 222109805
Start: 609466
End: 610218
Strand: Direct
Name: gltJ [H]
Synonym: Dtpsy_0589
Alternate gene names: 222109805
Gene position: 609466-610218 (Clockwise)
Preceding gene: 222109804
Following gene: 222109806
Centisome position: 16.05
GC content: 62.42
Gene sequence:
>753_bases ATGAATTGGGATTGGCAGGTGTTCTGCCAGGACACCATTACCCAAGAGGTCGGTCAAAGCTGCTTCGGCAAGAACGGCGA CATCACCTACCTCGACTGGATGCTGTCAGCCTGGGGCTGGACGGTATCCGTTTCCTTGCTGTCGCTGGCCGTTGCGCTGG TGGTCGGTTCGCTGGTCGGCACGCTGCGCACGCTGGAAGGCCGTCCATGGACGGTGCGCCTGGGCAACGCCTGGGTCGAG CTGTTTCGCAACATTCCGCTGCTGGTGCACATCTTTGTGTGGTACCACGTGGTGCCGTCGATTTTCCCGGCCATGAAGTC GCTGCCGGGCTTCGTGCTGGTGGTGTTTGCGCTGGGCTTTTTCACCTCGGCGCGTATCGCCGAGCAGGTGCGCTCGGGCA TTCAGGCGCTGCCGCGCGGCCAGCGCTATGCGGGCATGGCGCTGGGCTTCACCACGTTCCAGTACTACCGCTACGTGCTG CTGCCGATGGCGTTTCGCATCATCATCCCGCCGCTCACCAGCGAGACCATGAACGTGTTCAAGAACTCGTCGGTGGCGTT TGCCGTTTCGGTGGCCGAGCTGACCATGTTTGCCATGCAGGCGCAGGAAGAGACTTCACGCGGCATCGAGGTGTACCTGG CCGTCACGGCGCTGTACATCATCTCGGCCTTTGCCATCAACCGCATCATGGCGTTCATCGAAAAGCGCACGCGGGTGCCG GGCCTGATTGCCGCAGGCGGGGGAGGACACTGA
Upstream 100 bases:
>100_bases CCTTCGGCCTCTGGGCCCGAAGGGGCGTTTTTTGTTGTTGCGCCAGCGCCGCCATGTGCCGCCGCGGCAACACGGATCGA AGAATAGAAGGGGTGCTCCT
Downstream 100 bases:
>100_bases TATGAATCTGAATATCGATTGGTCCTTCTTCACCTGGGAGCTGTTCAGCAACTTCGTGATCAAGGGGCTGTACTTCAGCC TGGTGCTGACGGTGATCGCC
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MNWDWQVFCQDTITQEVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVGTLRTLEGRPWTVRLGNAWVE LFRNIPLLVHIFVWYHVVPSIFPAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVL LPMAFRIIIPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEVYLAVTALYIISAFAINRIMAFIEKRTRVP GLIAAGGGGH
Sequences:
>Translated_250_residues MNWDWQVFCQDTITQEVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVGTLRTLEGRPWTVRLGNAWVE LFRNIPLLVHIFVWYHVVPSIFPAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVL LPMAFRIIIPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEVYLAVTALYIISAFAINRIMAFIEKRTRVP GLIAAGGGGH >Mature_250_residues MNWDWQVFCQDTITQEVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVGTLRTLEGRPWTVRLGNAWVE LFRNIPLLVHIFVWYHVVPSIFPAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVL LPMAFRIIIPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEVYLAVTALYIISAFAINRIMAFIEKRTRVP GLIAAGGGGH
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=251, Percent_Identity=37.8486055776892, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1787030, Length=200, Percent_Identity=31, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI48994930, Length=133, Percent_Identity=37.593984962406, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=29.5774647887324, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=24.5283018867925, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI87082239, Length=161, Percent_Identity=27.9503105590062, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788645, Length=163, Percent_Identity=28.2208588957055, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27804; Mature: 27804
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWDWQVFCQDTITQEVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVG CCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRTLEGRPWTVRLGNAWVELFRNIPLLVHIFVWYHVVPSIFPAMKSLPGFVLVVFALGF HHHHCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVLLPMAFRIIIPPLTSETMNVF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KNSSVAFAVSVAELTMFAMQAQEETSRGIEVYLAVTALYIISAFAINRIMAFIEKRTRVP CCCCHHEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLIAAGGGGH EEEECCCCCC >Mature Secondary Structure MNWDWQVFCQDTITQEVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVG CCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRTLEGRPWTVRLGNAWVELFRNIPLLVHIFVWYHVVPSIFPAMKSLPGFVLVVFALGF HHHHCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVLLPMAFRIIIPPLTSETMNVF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KNSSVAFAVSVAELTMFAMQAQEETSRGIEVYLAVTALYIISAFAINRIMAFIEKRTRVP CCCCHHEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLIAAGGGGH EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]