| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is gltI [H]
Identifier: 222109804
GI number: 222109804
Start: 608446
End: 609345
Strand: Direct
Name: gltI [H]
Synonym: Dtpsy_0588
Alternate gene names: 222109804
Gene position: 608446-609345 (Clockwise)
Preceding gene: 222109803
Following gene: 222109805
Centisome position: 16.03
GC content: 61.67
Gene sequence:
>900_bases ATGAAGAAGCATTTGCTGGCCGCAGCCATTACCGTCCTGGCCGCTGGTAGCGCGTTCGCACAGGCCAACGACACCCTGGC CAAGATCAAATCTACGGGTGCCGTGACGCTGGGCGTGCGCGAGTCCTCGGGCCTGGGCTACACCCTGGGCAACGGCAAGT ACGTGGGCTTCCACACCGAGATGGGTGAGCGCATCCTGGCCGACATCCAGAAGCAGCTGGGCCTGGCCAACATGGAGATC AAGTACCAGCCGGTGACCTCGCAGAACCGCATTCCGCTGGTGACCAACGGCACGGTGGACATCGAGTGCGGCTCCACCAC CAACAACACCGCACGCCAGAAGGACGTGGCCTTCGCCGTGACCACCTACGTGGAAGAAGTGCGCATCGCCGTGAACGCCA AGTCGGGCATTACCGGCATCAAGGACCTGAACGGCAAGACCATCGTCACCACCACCGGCACGACGTCGGTGCAGACGCTG CGCAAGAACAAGCGCGCCGATGGCCTGACTTTCAAGGAAGTCATGGGCAAGGACCACGCCGACAGCTTCCTGATGCTGGA GACGGGCCGTGCCGACGCCTTCATCATGGACGGCTCCATCCTGGCGGCCAACATCTCCAAGTCCAAGAACCCTGCCGATT TCAAGATCGTGGGTGAAGTGCTGTCGGTGGAGCCCATTGCCTGCATGCTGCGCAAGGACGACCCCGCCTTCAAGAAGGCC GTGGACGATTCCATCAAGCGCCAGATCGCAGATGGCAGCCTGGCCAAGCTGTACGACAAGTGGTTCATGCAACCCATCCC GCCGGCCAACGTGAAGATCGGCCTGCCGCTGTCCGAAGCTACGAAGAACGCATGGGCCCACCCCAACGACAAGCCCATGG AGTCGTACGAAGTCAAGTAA
Upstream 100 bases:
>100_bases GAACGTGCCGCAGGGTGTGGCTTGACCGCCATCGGTTCCTCAGAACGGTCGTTCGATTTCAATACACTTCGCTTTTCGCT TCACCCACAAGGAGATATTC
Downstream 100 bases:
>100_bases TCGGCTTGCATTGCATCGCCCCTTCGGCCTCTGGGCCCGAAGGGGCGTTTTTTGTTGTTGCGCCAGCGCCGCCATGTGCC GCCGCGGCAACACGGATCGA
Product: family 3 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRESSGLGYTLGNGKYVGFHTEMGERILADIQKQLGLANMEI KYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVAFAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTL RKNKRADGLTFKEVMGKDHADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPAFKKA VDDSIKRQIADGSLAKLYDKWFMQPIPPANVKIGLPLSEATKNAWAHPNDKPMESYEVK
Sequences:
>Translated_299_residues MKKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRESSGLGYTLGNGKYVGFHTEMGERILADIQKQLGLANMEI KYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVAFAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTL RKNKRADGLTFKEVMGKDHADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPAFKKA VDDSIKRQIADGSLAKLYDKWFMQPIPPANVKIGLPLSEATKNAWAHPNDKPMESYEVK >Mature_299_residues MKKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRESSGLGYTLGNGKYVGFHTEMGERILADIQKQLGLANMEI KYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVAFAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTL RKNKRADGLTFKEVMGKDHADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPAFKKA VDDSIKRQIADGSLAKLYDKWFMQPIPPANVKIGLPLSEATKNAWAHPNDKPMESYEVK
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=42.5925925925926, Blast_Score=224, Evalue=8e-60, Organism=Escherichia coli, GI1787031, Length=211, Percent_Identity=27.9620853080569, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788228, Length=267, Percent_Identity=24.7191011235955, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32206; Mature: 32206
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRESSGLGYTLGNGKYVGFHTE CCHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCEEEEEEECCCCCEEECCCCEEEEEEHH MGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVAFAV HHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHH TTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMGKDHA HHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHCCCCC DSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPAFKKA CCEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEHHHHCCCCEEEEEECCCHHHHHH VDDSIKRQIADGSLAKLYDKWFMQPIPPANVKIGLPLSEATKNAWAHPNDKPMESYEVK HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRESSGLGYTLGNGKYVGFHTE CCHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCEEEEEEECCCCCEEECCCCEEEEEEHH MGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVAFAV HHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHH TTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMGKDHA HHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHCCCCC DSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPAFKKA CCEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEHHHHCCCCEEEEEECCCHHHHHH VDDSIKRQIADGSLAKLYDKWFMQPIPPANVKIGLPLSEATKNAWAHPNDKPMESYEVK HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]