| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109795
Identifier: 222109795
GI number: 222109795
Start: 599758
End: 600312
Strand: Direct
Name: 222109795
Synonym: Dtpsy_0579
Alternate gene names: NA
Gene position: 599758-600312 (Clockwise)
Preceding gene: 222109794
Following gene: 222109797
Centisome position: 15.8
GC content: 66.31
Gene sequence:
>555_bases ATGGCCGTGCAAAACCCCTTCTTTGGCAAACGCGAACCCGACACTTTCCAATCCCGCCAGCCTTCGTCAGCGCTAGGCGG CACCACCACCACCACAAGCACCCCAACCGCCGCTCCCGCAACCAGAACTGCTGTGTCCACGGCCTCCAGCGCCACGGCCG AGGGCAGCGGCAGCAAGCTGACCGTGGGCCCCAACATCAAGCTCAAGGGTGTGGAGATCACCGATTGCGACACCCTCGTC GTGGAAGGCACGGTGGAGGCCACCATGGATTCGCGCGTGATCCAGATCACCGAGCAGGGCGCGTTCCGCGGCTCCGCCGA GATCGACATTGCCGAAATCCACGGCGAGTTCGACGGCACGCTCACCGTGCGCCAGAAGCTGGTGATCTTCAGCACCGGCA AGGTGAGCGGCAAGATCCGCTACGGCAAGGTGGTGATCGAAGAGGGTGGCCAGCTCTCCGGCGAGATCGAGGTGGGCCTG GGTGGTGGCGCGCGCATGAGCGCGGCCTCGGGTTCGTCGTCTGCCGCATCCTCGGCCGCGCTGGCCGCGGCCTGA
Upstream 100 bases:
>100_bases AACCATCGAACGGTTTGGTTACCGTTCTTGCGTAACAGGGGCGGTTTTGATCTGTGGCAACTCCTAGCATCTGCGGGTCT TTTCTAGGAGATCCGATCCG
Downstream 100 bases:
>100_bases CGCCGGCACACCCATCGCCGCCAGCGGGAGGCCGTGAGGCGCTCCCGTTTTTTTTACGGTGCGACGCTTTCGTCGCCCGG CTTCTGAATGGGGCGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAVQNPFFGKREPDTFQSRQPSSALGGTTTTTSTPTAAPATRTAVSTASSATAEGSGSKLTVGPNIKLKGVEITDCDTLV VEGTVEATMDSRVIQITEQGAFRGSAEIDIAEIHGEFDGTLTVRQKLVIFSTGKVSGKIRYGKVVIEEGGQLSGEIEVGL GGGARMSAASGSSSAASSAALAAA
Sequences:
>Translated_184_residues MAVQNPFFGKREPDTFQSRQPSSALGGTTTTTSTPTAAPATRTAVSTASSATAEGSGSKLTVGPNIKLKGVEITDCDTLV VEGTVEATMDSRVIQITEQGAFRGSAEIDIAEIHGEFDGTLTVRQKLVIFSTGKVSGKIRYGKVVIEEGGQLSGEIEVGL GGGARMSAASGSSSAASSAALAAA >Mature_183_residues AVQNPFFGKREPDTFQSRQPSSALGGTTTTTSTPTAAPATRTAVSTASSATAEGSGSKLTVGPNIKLKGVEITDCDTLVV EGTVEATMDSRVIQITEQGAFRGSAEIDIAEIHGEFDGTLTVRQKLVIFSTGKVSGKIRYGKVVIEEGGQLSGEIEVGLG GGARMSAASGSSSAASSAALAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18600; Mature: 18469
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQNPFFGKREPDTFQSRQPSSALGGTTTTTSTPTAAPATRTAVSTASSATAEGSGSKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEE TVGPNIKLKGVEITDCDTLVVEGTVEATMDSRVIQITEQGAFRGSAEIDIAEIHGEFDGT EECCCEEEEEEEECCCCEEEEECEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCE LTVRQKLVIFSTGKVSGKIRYGKVVIEEGGQLSGEIEVGLGGGARMSAASGSSSAASSAA EEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCEE LAAA EECC >Mature Secondary Structure AVQNPFFGKREPDTFQSRQPSSALGGTTTTTSTPTAAPATRTAVSTASSATAEGSGSKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEE TVGPNIKLKGVEITDCDTLVVEGTVEATMDSRVIQITEQGAFRGSAEIDIAEIHGEFDGT EECCCEEEEEEEECCCCEEEEECEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCE LTVRQKLVIFSTGKVSGKIRYGKVVIEEGGQLSGEIEVGLGGGARMSAASGSSSAASSAA EEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCEE LAAA EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA