| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yigI [H]
Identifier: 222109794
GI number: 222109794
Start: 599089
End: 599571
Strand: Direct
Name: yigI [H]
Synonym: Dtpsy_0578
Alternate gene names: 222109794
Gene position: 599089-599571 (Clockwise)
Preceding gene: 222109793
Following gene: 222109795
Centisome position: 15.78
GC content: 67.7
Gene sequence:
>483_bases ATGAGCAAACCTGCCAGCCTGCCGGTGGCCTTCGAGCCCGAGTTCATCGCCGGCCTGCGCCAGATCTTTGAGGAGAAGAT TCCCTTCAACCACCTGTTGGGGCTGAAGATCACGCGCTTGGAGCCCGCGGCCGTCGCGGCGCGCATCGACATGCGTCCCG ATCTGGTGGGGCACTTTGCCTACAACCGGCTGCACGGCGGCGTCATCAGCGCGGGGCTGGATGCCATGGGCGGTCTGGCC GTGATGGCGGCCATCGGCGCCAAGCACATGGACGAGGTGCCCATGGACCGCCTGCACCGCTTTGCCAAGCTGGGCACCAT CGACCTGCGCATCGACTATCTGCGCCCCGGCATCGGCAGCCACTTCGAGCTGCGGGCCGAGGTGCTGCGCCTGGGCTCGC GCGTTGCCACCACGCGCATGGAGTTCCTCGGCCCGCAGGGCGAGCTGATGTCCGCGGGAGCCGCGGCGTACATCGTCTCT TAG
Upstream 100 bases:
>100_bases CCGTGTCTGCTGGACCGGGTGGCCGGGCGTTTGAATGAAAAATGGCTCTAGCGCTTATCCAGTAAGCGCTAACAGCTCCT GATAAGAGAGCAAAAATTCC
Downstream 100 bases:
>100_bases CGCGACCGTGCGAAGACGGCCGCGCCGGGCACGCGCCGTTTGGGGGATACGCGCTGTGTGCTGCTGCAAGCCCTGCAAGT GCATGCAACCATCGAACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSKPASLPVAFEPEFIAGLRQIFEEKIPFNHLLGLKITRLEPAAVAARIDMRPDLVGHFAYNRLHGGVISAGLDAMGGLA VMAAIGAKHMDEVPMDRLHRFAKLGTIDLRIDYLRPGIGSHFELRAEVLRLGSRVATTRMEFLGPQGELMSAGAAAYIVS
Sequences:
>Translated_160_residues MSKPASLPVAFEPEFIAGLRQIFEEKIPFNHLLGLKITRLEPAAVAARIDMRPDLVGHFAYNRLHGGVISAGLDAMGGLA VMAAIGAKHMDEVPMDRLHRFAKLGTIDLRIDYLRPGIGSHFELRAEVLRLGSRVATTRMEFLGPQGELMSAGAAAYIVS >Mature_159_residues SKPASLPVAFEPEFIAGLRQIFEEKIPFNHLLGLKITRLEPAAVAARIDMRPDLVGHFAYNRLHGGVISAGLDAMGGLAV MAAIGAKHMDEVPMDRLHRFAKLGTIDLRIDYLRPGIGSHFELRAEVLRLGSRVATTRMEFLGPQGELMSAGAAAYIVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082336, Length=140, Percent_Identity=35.7142857142857, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 17391; Mature: 17259
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPASLPVAFEPEFIAGLRQIFEEKIPFNHLLGLKITRLEPAAVAARIDMRPDLVGHFA CCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHCCEEECCCHHHHHEECCCCCHHHHHHH YNRLHGGVISAGLDAMGGLAVMAAIGAKHMDEVPMDRLHRFAKLGTIDLRIDYLRPGIGS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCCC HFELRAEVLRLGSRVATTRMEFLGPQGELMSAGAAAYIVS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEC >Mature Secondary Structure SKPASLPVAFEPEFIAGLRQIFEEKIPFNHLLGLKITRLEPAAVAARIDMRPDLVGHFA CCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHCCEEECCCHHHHHEECCCCCHHHHHHH YNRLHGGVISAGLDAMGGLAVMAAIGAKHMDEVPMDRLHRFAKLGTIDLRIDYLRPGIGS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCCC HFELRAEVLRLGSRVATTRMEFLGPQGELMSAGAAAYIVS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]