| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is lnt [H]
Identifier: 222109756
GI number: 222109756
Start: 558425
End: 560023
Strand: Direct
Name: lnt [H]
Synonym: Dtpsy_0540
Alternate gene names: 222109756
Gene position: 558425-560023 (Clockwise)
Preceding gene: 222109755
Following gene: 222109757
Centisome position: 14.71
GC content: 70.92
Gene sequence:
>1599_bases ATGGCCGTCGCACCGCCCTTGGCCGCGCACGCACCGCGCCGCGGCCCGTTGCCCTGGGTGCTGGCACTGGTGGCCGGGCT GGCGCAGGCCGCATCGCTGGCCTGGCCCTGGGGCGGACAGCCGCTGTGGTGGCTGCAGATCCTGTCGCTGGGCTTGTGGG CGCATGTGCTGCTGGGCGCCGGCGGTACACGCCGGGCCGGCCTGCTGGGCTGGGTGTTCGCCACGGCGTGGCTCGCGGGC ACGTTCTGGTGGCTGTTCATCTCCATGCACACGTATGGGGGACTGGCCGCGCCGCTGGCCGTGCTGGCGGTGCTGGGGCT GGCGGCGTTCCTCGGCAGTTATTACGCAGCGGTTTCTGCATGTTTTTGGGCCCTAGCGCCCGTCCATAGAGCGTTGGCAG CTATCGTTTTTGCTGCGCTGTGGTTGTTGGCGGAATTGGCACGCGGCCAATGGTGGACCGGCTTTCCGTGGGGCGCAGGC GGCTACGCGCATGTGCAGGGGCCCCTGGCCGCGCTGGCGCGCAGCGTGGGCGTGTACGGCATCGGTGCTGCGGCGGCGCT CTTGGCCATGTTGCTGGCGCAGGCGCGCCGCGCCGACCTGCGCAACGCACGTGCCTGGGCGCTGGTCCTCGCGCTCACGG CCGTGGGGGCAGGGGCCGCCTGGCAGCGCCACTGCGCCGTCGAGGGCTGCGGTGCCCCGCCGCCCGTGCATGCGCCGCTG TCGCTGGCGCTGCTGCAGGGCAACATCCCGCAGGACGAGAAGTTCCAGCCCGGCAGTGGCGTGCCGATGGCGCTGCAGTG GTATTACGACCAGATCCACGCGGCCAAGGCCAGCCTGGTGGTGGCGCCCGAGACGGCCATCCCCCTGTTGCCGCAGCAAC TGGTGCCCGGCTATTTGGAGGGCATGGCCGAGCGCTATGCCGCAGGCGGCCAGGCGCTGCTGCTGGGCATCCCGCTGGGC AGCCTGGAAGAGGGCTATACCAACTCGGTGCTGGGCTTTGCGCCCGAGCAGTCGCAGCCCTACCGCTACGACAAGCACCA CCTGGTGCCGTTCGGCGAGTTCATCCCGCCGTTCTTCCGCTGGTTCACCGAGATGATGAACATCCCCCTGGGCGACTTCA ACCGCGGCGCGGTGGGTCAGCCGTCGCTGGCGTGGGCCGGCGAGCGCATAGCGCCCAATATCTGCTACGAGGACTTGTTC GGCGAGGAGATCGGCGTGCGCTTTCTCGACCCGGCGAGCAGCCCCACCATCCTCGTGAACCTGAGCAACATCGGCTGGTT CGGCAACACCGTGGCGGTGGACCAGCACTTGGCCATCAGCCGTCTGCGCGCGCTGGAGTTCGAGCGTCCCATGGTGCGTG CCACCAACACCGGCGCCACGGCGGTGATCGACCACCGCGGGCAGGTCACGCACCGCATGCCGGCTTATCAGCGCGGCGTG CTGCGCGCCCAGGTGCAGGGGCGTGGTGGCGCCGCCACGCCGTACGCCCGGTGGGTGGCGCGCTGGGGGCTTTGGCCCCT GTGGGCGCTCGGGTTTGCAGTGGCGGGGCTGGCCTGGTGCCTGCGCGGGCGCACAGGGCGGGCGCGGGCTGGAAATTGA
Upstream 100 bases:
>100_bases TGCTCGGCGGCCTGCAGTTTGTGGTGATGCACACCAAGGGCGGGTCGGTGCGCTGGTTCAAGGTCGCACCGGCGGCGGGC ACGCCCGAGTCCGAACGCTG
Downstream 100 bases:
>100_bases TCCAGATCATCCCGGCGCGGTAGCCAGCGGGCTTTCCCGGGGCACGGTTACAGGCCAGAGCGCGCGCGAGCCTGGATAAT AGAGGGCCTTCGCCGCCCGT
Product: apolipoprotein n-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MAVAPPLAAHAPRRGPLPWVLALVAGLAQAASLAWPWGGQPLWWLQILSLGLWAHVLLGAGGTRRAGLLGWVFATAWLAG TFWWLFISMHTYGGLAAPLAVLAVLGLAAFLGSYYAAVSACFWALAPVHRALAAIVFAALWLLAELARGQWWTGFPWGAG GYAHVQGPLAALARSVGVYGIGAAAALLAMLLAQARRADLRNARAWALVLALTAVGAGAAWQRHCAVEGCGAPPPVHAPL SLALLQGNIPQDEKFQPGSGVPMALQWYYDQIHAAKASLVVAPETAIPLLPQQLVPGYLEGMAERYAAGGQALLLGIPLG SLEEGYTNSVLGFAPEQSQPYRYDKHHLVPFGEFIPPFFRWFTEMMNIPLGDFNRGAVGQPSLAWAGERIAPNICYEDLF GEEIGVRFLDPASSPTILVNLSNIGWFGNTVAVDQHLAISRLRALEFERPMVRATNTGATAVIDHRGQVTHRMPAYQRGV LRAQVQGRGGAATPYARWVARWGLWPLWALGFAVAGLAWCLRGRTGRARAGN
Sequences:
>Translated_532_residues MAVAPPLAAHAPRRGPLPWVLALVAGLAQAASLAWPWGGQPLWWLQILSLGLWAHVLLGAGGTRRAGLLGWVFATAWLAG TFWWLFISMHTYGGLAAPLAVLAVLGLAAFLGSYYAAVSACFWALAPVHRALAAIVFAALWLLAELARGQWWTGFPWGAG GYAHVQGPLAALARSVGVYGIGAAAALLAMLLAQARRADLRNARAWALVLALTAVGAGAAWQRHCAVEGCGAPPPVHAPL SLALLQGNIPQDEKFQPGSGVPMALQWYYDQIHAAKASLVVAPETAIPLLPQQLVPGYLEGMAERYAAGGQALLLGIPLG SLEEGYTNSVLGFAPEQSQPYRYDKHHLVPFGEFIPPFFRWFTEMMNIPLGDFNRGAVGQPSLAWAGERIAPNICYEDLF GEEIGVRFLDPASSPTILVNLSNIGWFGNTVAVDQHLAISRLRALEFERPMVRATNTGATAVIDHRGQVTHRMPAYQRGV LRAQVQGRGGAATPYARWVARWGLWPLWALGFAVAGLAWCLRGRTGRARAGN >Mature_531_residues AVAPPLAAHAPRRGPLPWVLALVAGLAQAASLAWPWGGQPLWWLQILSLGLWAHVLLGAGGTRRAGLLGWVFATAWLAGT FWWLFISMHTYGGLAAPLAVLAVLGLAAFLGSYYAAVSACFWALAPVHRALAAIVFAALWLLAELARGQWWTGFPWGAGG YAHVQGPLAALARSVGVYGIGAAAALLAMLLAQARRADLRNARAWALVLALTAVGAGAAWQRHCAVEGCGAPPPVHAPLS LALLQGNIPQDEKFQPGSGVPMALQWYYDQIHAAKASLVVAPETAIPLLPQQLVPGYLEGMAERYAAGGQALLLGIPLGS LEEGYTNSVLGFAPEQSQPYRYDKHHLVPFGEFIPPFFRWFTEMMNIPLGDFNRGAVGQPSLAWAGERIAPNICYEDLFG EEIGVRFLDPASSPTILVNLSNIGWFGNTVAVDQHLAISRLRALEFERPMVRATNTGATAVIDHRGQVTHRMPAYQRGVL RAQVQGRGGAATPYARWVARWGLWPLWALGFAVAGLAWCLRGRTGRARAGN
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=458, Percent_Identity=32.7510917030568, Blast_Score=201, Evalue=8e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 57027; Mature: 56896
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAPPLAAHAPRRGPLPWVLALVAGLAQAASLAWPWGGQPLWWLQILSLGLWAHVLLGA CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC GGTRRAGLLGWVFATAWLAGTFWWLFISMHTYGGLAAPLAVLAVLGLAAFLGSYYAAVSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CFWALAPVHRALAAIVFAALWLLAELARGQWWTGFPWGAGGYAHVQGPLAALARSVGVYG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC IGAAAALLAMLLAQARRADLRNARAWALVLALTAVGAGAAWQRHCAVEGCGAPPPVHAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCH SLALLQGNIPQDEKFQPGSGVPMALQWYYDQIHAAKASLVVAPETAIPLLPQQLVPGYLE HHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCHHHH GMAERYAAGGQALLLGIPLGSLEEGYTNSVLGFAPEQSQPYRYDKHHLVPFGEFIPPFFR HHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCHHHH WFTEMMNIPLGDFNRGAVGQPSLAWAGERIAPNICYEDLFGEEIGVRFLDPASSPTILVN HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCHHHCCEEECCCCCCEEEEE LSNIGWFGNTVAVDQHLAISRLRALEFERPMVRATNTGATAVIDHRGQVTHRMPAYQRGV ECCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHEECCCCCEEEEECCCCCHHCCCHHHHCH LRAQVQGRGGAATPYARWVARWGLWPLWALGFAVAGLAWCLRGRTGRARAGN HHEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AVAPPLAAHAPRRGPLPWVLALVAGLAQAASLAWPWGGQPLWWLQILSLGLWAHVLLGA CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC GGTRRAGLLGWVFATAWLAGTFWWLFISMHTYGGLAAPLAVLAVLGLAAFLGSYYAAVSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CFWALAPVHRALAAIVFAALWLLAELARGQWWTGFPWGAGGYAHVQGPLAALARSVGVYG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC IGAAAALLAMLLAQARRADLRNARAWALVLALTAVGAGAAWQRHCAVEGCGAPPPVHAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCH SLALLQGNIPQDEKFQPGSGVPMALQWYYDQIHAAKASLVVAPETAIPLLPQQLVPGYLE HHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCHHHH GMAERYAAGGQALLLGIPLGSLEEGYTNSVLGFAPEQSQPYRYDKHHLVPFGEFIPPFFR HHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCHHHH WFTEMMNIPLGDFNRGAVGQPSLAWAGERIAPNICYEDLFGEEIGVRFLDPASSPTILVN HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCHHHCCEEECCCCCCEEEEE LSNIGWFGNTVAVDQHLAISRLRALEFERPMVRATNTGATAVIDHRGQVTHRMPAYQRGV ECCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHEECCCCCEEEEECCCCCHHCCCHHHHCH LRAQVQGRGGAATPYARWVARWGLWPLWALGFAVAGLAWCLRGRTGRARAGN HHEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA