| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109683
Identifier: 222109683
GI number: 222109683
Start: 478407
End: 479225
Strand: Direct
Name: 222109683
Synonym: Dtpsy_0464
Alternate gene names: NA
Gene position: 478407-479225 (Clockwise)
Preceding gene: 222109682
Following gene: 222109684
Centisome position: 12.6
GC content: 70.82
Gene sequence:
>819_bases ATGCTTGCGCGCATGAGCCAAGACGCCTCCCTGCACCAGCGGCGCCGCCCGCCCACGGCCCAAGAACTCAGCGGCATTCC CTGGATGGCGTTGCTGCAGCCCGCCGAGCGCGAACGGGCGGTGGCAGCGCTGGCCGTCGGCGATGCCCAGCCGGGCGACT ACGTGTGCCGTGTGGGCCGGCCGGTGACGTACTGGTTTGGGGTGGTCGAGGGCCTGCTCAAGATGAGCGCGGACAACGCC GACGGGCTGACGATGACCTTCACCGGCGTGCCCCCCGGCGGCTGGTTCGGCGAAGGCACGGCGGTCAAGCGCGAGCCCTA CCGCTACAACATCCAGGCCCTGCGCAAGAGCGTGGTGGCGGGCCTGCCCATCGACACCTTCCATTGGCTGCTGGACCATT CCATCGGCTTCAACCGCTTCGTGATGAACCAGCTCAACGAGCGCCTGGCACAGTTCATCGCCGCGCGGGAAATCGACCGC CTCACCAACCCCGACCTGCGCGTGGCGCGCAGCCTGGCGGCGCTGTTCAACCCCGTGCTCTACCCTGGCGTCGGGGAAGT GCTGCGCATCACCCAGCAGGAGCTGGCCTACCTGGTCGGCCTGTCGCGCCAACGTGTGAACGAGGCCCTGGCGACCCTGG AAGCGCAGGGGGCGATCCGCGTGGAGTACGGCGGCCTGCGCGTGCTGGACCTGCAGGCGCTGCGCACCAGCCTGTTCAGG CGGATGGAGCCGGCGGACGCGGACCGCCCCGGGCCCCGGCGCCGCGCTTCACCGCGCAGGGCGCCGGCCGACGAGAACGA GCCCGCCGCCATGATCTGA
Upstream 100 bases:
>100_bases AACAGCTATTAAATCAATAGCATCCGAGTGTGTCGATACCTCGGACCGGCCAGGCGTAGGTTCGTGGTATTCCCGCTGCC CCGCGGCGCGCTTTGACCGC
Downstream 100 bases:
>100_bases AGGCGCGGTAGAGGGGGCGGGGTGCGGCGCGCTCCACGGCGCGAGACAATAGCGCCATGCCCGAAACGCCCGCCCGTCCC CCCGCACGGTCCGTCCCCGC
Product: Crp/Fnr family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; HTH Crp Family Transcriptional Regulator
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLARMSQDASLHQRRRPPTAQELSGIPWMALLQPAERERAVAALAVGDAQPGDYVCRVGRPVTYWFGVVEGLLKMSADNA DGLTMTFTGVPPGGWFGEGTAVKREPYRYNIQALRKSVVAGLPIDTFHWLLDHSIGFNRFVMNQLNERLAQFIAAREIDR LTNPDLRVARSLAALFNPVLYPGVGEVLRITQQELAYLVGLSRQRVNEALATLEAQGAIRVEYGGLRVLDLQALRTSLFR RMEPADADRPGPRRRASPRRAPADENEPAAMI
Sequences:
>Translated_272_residues MLARMSQDASLHQRRRPPTAQELSGIPWMALLQPAERERAVAALAVGDAQPGDYVCRVGRPVTYWFGVVEGLLKMSADNA DGLTMTFTGVPPGGWFGEGTAVKREPYRYNIQALRKSVVAGLPIDTFHWLLDHSIGFNRFVMNQLNERLAQFIAAREIDR LTNPDLRVARSLAALFNPVLYPGVGEVLRITQQELAYLVGLSRQRVNEALATLEAQGAIRVEYGGLRVLDLQALRTSLFR RMEPADADRPGPRRRASPRRAPADENEPAAMI >Mature_272_residues MLARMSQDASLHQRRRPPTAQELSGIPWMALLQPAERERAVAALAVGDAQPGDYVCRVGRPVTYWFGVVEGLLKMSADNA DGLTMTFTGVPPGGWFGEGTAVKREPYRYNIQALRKSVVAGLPIDTFHWLLDHSIGFNRFVMNQLNERLAQFIAAREIDR LTNPDLRVARSLAALFNPVLYPGVGEVLRITQQELAYLVGLSRQRVNEALATLEAQGAIRVEYGGLRVLDLQALRTSLFR RMEPADADRPGPRRRASPRRAPADENEPAAMI
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30227; Mature: 30227
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARMSQDASLHQRRRPPTAQELSGIPWMALLQPAERERAVAALAVGDAQPGDYVCRVGR CCCCCCCCHHHHHHCCCCCHHHHCCCCHHHHHCCHHHHHHEEEEEECCCCCCHHEEECCC PVTYWFGVVEGLLKMSADNADGLTMTFTGVPPGGWFGEGTAVKREPYRYNIQALRKSVVA CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECHHHHHHHHHH GLPIDTFHWLLDHSIGFNRFVMNQLNERLAQFIAAREIDRLTNPDLRVARSLAALFNPVL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH YPGVGEVLRITQQELAYLVGLSRQRVNEALATLEAQGAIRVEYGGLRVLDLQALRTSLFR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEHHHHHHHHHHH RMEPADADRPGPRRRASPRRAPADENEPAAMI HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLARMSQDASLHQRRRPPTAQELSGIPWMALLQPAERERAVAALAVGDAQPGDYVCRVGR CCCCCCCCHHHHHHCCCCCHHHHCCCCHHHHHCCHHHHHHEEEEEECCCCCCHHEEECCC PVTYWFGVVEGLLKMSADNADGLTMTFTGVPPGGWFGEGTAVKREPYRYNIQALRKSVVA CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECHHHHHHHHHH GLPIDTFHWLLDHSIGFNRFVMNQLNERLAQFIAAREIDRLTNPDLRVARSLAALFNPVL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH YPGVGEVLRITQQELAYLVGLSRQRVNEALATLEAQGAIRVEYGGLRVLDLQALRTSLFR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEHHHHHHHHHHH RMEPADADRPGPRRRASPRRAPADENEPAAMI HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA