| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is exeA [H]
Identifier: 222109682
GI number: 222109682
Start: 475712
End: 477445
Strand: Direct
Name: exeA [H]
Synonym: Dtpsy_0462
Alternate gene names: 222109682
Gene position: 475712-477445 (Clockwise)
Preceding gene: 222109672
Following gene: 222109683
Centisome position: 12.53
GC content: 73.13
Gene sequence:
>1734_bases ATGCTCGCCGCCATGTACGCCCCGTTCTTCGGACTCGAACACCCGCCTTTTTCCATCGCGCCCGACCCGCGCTACCTCTT CATGAGCGAGCGCCATCGCGAAGCCCTGGCCCACCTGCTGTACGGCCTGGATGCGGGCGGCGGCTTCGTGCTGCTCACCG GCGAGATCGGGACCGGCAAGACCACGGTGTGCCGCTGCTTCCTGGAACAGATTCCGCCGCAGTGCAACGTCGCTTACATC TTCAACCCGAAGCTCACGGTGCCTGAGCTGCTGCGCTCCATCTGCGACGAATTCGGCGTGGCGCACCGCCCCGCCATACC GGGGGCGGAGACCGTGAAGGACTGCCTGGACCCGCTCAACGACTTCTTGCTGCAGCAGCACGCGGCGGGGCGCAACAACG TGCTCATCATCGATGAGGCGCAGAACCTCGCGCCCGATGTGCTGGAACAGCTGCGCCTGCTCACCAACCTCGAGACCAGC GAGCGCAAGCTGCTGCAGATCATCCTCATCGGCCAGCCCGAGCTGCGTGCAATGGTGGCGGCGCCGGAGCTGGAGCAGCT CGCGCAGCGCGTGATCGCGCGCTACCACCTGGACGCCTTGAGCGCCGACGAAACACGCCAGTACATCGCCCACCGCATGG CCGTGGCCGGGCTGCAAGGGCCGCTGCCTTTTCAGCAGCGGGCGCTGGCGCGCGTGCACGCGCTCACGGGTGGCGTGCCG CGGCGCATCAACCTGCTGTGCGACCGTGCCCTGCTGGGTGCCTACGGCGCGGGTGTGCGCGAGGTGACCGATGCCATGGT GCGCCGCGCCGCGCGCGAGGTGTTCGATGCGCCCGCCACGGCGCGCCCGCGCCCGGGCTCGGCAGGGCGCTGGCTCGCCG CTGGAACCGGCGGGCTGGTGGGCGCGGCGGCGCTGGGCGGGCTGGCCTGGGCCCTGGGCTGGTGGCCGCTCGCAGACGGT GGCGCCGGCTCCACACAGGCACAGACACAGACACAGAGGCCGGCCATCGCCGCGTCGGCTGCGGCCGTGCCCGCGTCATC CCCCGCCTCGGCTGCTTCTGCACCCGACGCGCCGGCCCCGCCAGCGCCCCCGCCGACGTTGGCGCAGTTCCTGGCCATCC AGCCCGTGGCGCAGGCGCCGGCGGCCTGGCAGGCGCTGGCCCGGCAGTGGCAGGCGAGCGTGTCCGACGGCGCCGCGGAC CCCTGCGCCGCGCTGGCGTCCGAGGGCCTGCGCTGCTACCGCAGCCGCCGCGCCAGCCTGAACCTGCTGCGCCAGCTCGA CCGGCCCGTGCTGCTGATGCTGCGGCCCGCCGAGGGCGATGCGCAGGGCGAGGCCCTGGCGCCTGAGGTGGCGGTCTTGC TGCGCCGGCTGGATGACGGCACCGCCACGCTGGAAGGCGTGCAGGGCCAGACGCTGCAGGTGCGCGTGACGGAGCTTGCG CCGCTGTGGCGCGGCGAGGTTGCCACGCTGTGGAAGGCCCCTGCCGAGCTGGCCGATTCGGGCGACGTCACCGCCACTGC CGCGGGCGCCGCTTGGCTGGACCAGCAACTGGCGGCCGCCGGCGCGGGCGCCGCCGCAGCCCGTACCGCAACGCCCGCCG CGCGCCGCGCGCGCATCCACCAATTTCAGCTGGGCCAGGGCCTCACGCCCGATGGCCGCGCTGGTCCCTTGACCCTGATG TTGCTCAACCGCGCCGCAGGCGTGCCGGAGCCGCGTTTGCTCAGCGGAGCCTGA
Upstream 100 bases:
>100_bases AATTCAAGGGTTAGTCCTCAGGGGTCTAACCCTGACCGCCCTCGACAGGTGGTGATCGCGGGAGGCTGAGGGGTTCATGG GCGCGACAGGCGAGGGCGCT
Downstream 100 bases:
>100_bases ACCCATGTCCTACATTCTTGATGCGCTGCGGCGCGCCCAGGCCGAGCGCGGCCGTGGCAGCGTGCCCGGCCTGCATACCC CCGCGTCGCCCGTGGCGGTG
Product: peptidoglycan-binding domain 1 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MLAAMYAPFFGLEHPPFSIAPDPRYLFMSERHREALAHLLYGLDAGGGFVLLTGEIGTGKTTVCRCFLEQIPPQCNVAYI FNPKLTVPELLRSICDEFGVAHRPAIPGAETVKDCLDPLNDFLLQQHAAGRNNVLIIDEAQNLAPDVLEQLRLLTNLETS ERKLLQIILIGQPELRAMVAAPELEQLAQRVIARYHLDALSADETRQYIAHRMAVAGLQGPLPFQQRALARVHALTGGVP RRINLLCDRALLGAYGAGVREVTDAMVRRAAREVFDAPATARPRPGSAGRWLAAGTGGLVGAAALGGLAWALGWWPLADG GAGSTQAQTQTQRPAIAASAAAVPASSPASAASAPDAPAPPAPPPTLAQFLAIQPVAQAPAAWQALARQWQASVSDGAAD PCAALASEGLRCYRSRRASLNLLRQLDRPVLLMLRPAEGDAQGEALAPEVAVLLRRLDDGTATLEGVQGQTLQVRVTELA PLWRGEVATLWKAPAELADSGDVTATAAGAAWLDQQLAAAGAGAAAARTATPAARRARIHQFQLGQGLTPDGRAGPLTLM LLNRAAGVPEPRLLSGA
Sequences:
>Translated_577_residues MLAAMYAPFFGLEHPPFSIAPDPRYLFMSERHREALAHLLYGLDAGGGFVLLTGEIGTGKTTVCRCFLEQIPPQCNVAYI FNPKLTVPELLRSICDEFGVAHRPAIPGAETVKDCLDPLNDFLLQQHAAGRNNVLIIDEAQNLAPDVLEQLRLLTNLETS ERKLLQIILIGQPELRAMVAAPELEQLAQRVIARYHLDALSADETRQYIAHRMAVAGLQGPLPFQQRALARVHALTGGVP RRINLLCDRALLGAYGAGVREVTDAMVRRAAREVFDAPATARPRPGSAGRWLAAGTGGLVGAAALGGLAWALGWWPLADG GAGSTQAQTQTQRPAIAASAAAVPASSPASAASAPDAPAPPAPPPTLAQFLAIQPVAQAPAAWQALARQWQASVSDGAAD PCAALASEGLRCYRSRRASLNLLRQLDRPVLLMLRPAEGDAQGEALAPEVAVLLRRLDDGTATLEGVQGQTLQVRVTELA PLWRGEVATLWKAPAELADSGDVTATAAGAAWLDQQLAAAGAGAAAARTATPAARRARIHQFQLGQGLTPDGRAGPLTLM LLNRAAGVPEPRLLSGA >Mature_577_residues MLAAMYAPFFGLEHPPFSIAPDPRYLFMSERHREALAHLLYGLDAGGGFVLLTGEIGTGKTTVCRCFLEQIPPQCNVAYI FNPKLTVPELLRSICDEFGVAHRPAIPGAETVKDCLDPLNDFLLQQHAAGRNNVLIIDEAQNLAPDVLEQLRLLTNLETS ERKLLQIILIGQPELRAMVAAPELEQLAQRVIARYHLDALSADETRQYIAHRMAVAGLQGPLPFQQRALARVHALTGGVP RRINLLCDRALLGAYGAGVREVTDAMVRRAAREVFDAPATARPRPGSAGRWLAAGTGGLVGAAALGGLAWALGWWPLADG GAGSTQAQTQTQRPAIAASAAAVPASSPASAASAPDAPAPPAPPPTLAQFLAIQPVAQAPAAWQALARQWQASVSDGAAD PCAALASEGLRCYRSRRASLNLLRQLDRPVLLMLRPAEGDAQGEALAPEVAVLLRRLDDGTATLEGVQGQTLQVRVTELA PLWRGEVATLWKAPAELADSGDVTATAAGAAWLDQQLAAAGAGAAAARTATPAARRARIHQFQLGQGLTPDGRAGPLTLM LLNRAAGVPEPRLLSGA
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 60831; Mature: 60831
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAMYAPFFGLEHPPFSIAPDPRYLFMSERHREALAHLLYGLDAGGGFVLLTGEIGTGK CCHHHHCHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH TTVCRCFLEQIPPQCNVAYIFNPKLTVPELLRSICDEFGVAHRPAIPGAETVKDCLDPLN HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH DFLLQQHAAGRNNVLIIDEAQNLAPDVLEQLRLLTNLETSERKLLQIILIGQPELRAMVA HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHC APELEQLAQRVIARYHLDALSADETRQYIAHRMAVAGLQGPLPFQQRALARVHALTGGVP CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC RRINLLCDRALLGAYGAGVREVTDAMVRRAAREVFDAPATARPRPGSAGRWLAAGTGGLV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHH GAAALGGLAWALGWWPLADGGAGSTQAQTQTQRPAIAASAAAVPASSPASAASAPDAPAP HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCC PAPPPTLAQFLAIQPVAQAPAAWQALARQWQASVSDGAADPCAALASEGLRCYRSRRASL CCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NLLRQLDRPVLLMLRPAEGDAQGEALAPEVAVLLRRLDDGTATLEGVQGQTLQVRVTELA HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHC PLWRGEVATLWKAPAELADSGDVTATAAGAAWLDQQLAAAGAGAAAARTATPAARRARIH CHHCCCHHHHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHH QFQLGQGLTPDGRAGPLTLMLLNRAAGVPEPRLLSGA HHHCCCCCCCCCCCCCCHHEEEHHHCCCCCCCCCCCC >Mature Secondary Structure MLAAMYAPFFGLEHPPFSIAPDPRYLFMSERHREALAHLLYGLDAGGGFVLLTGEIGTGK CCHHHHCHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH TTVCRCFLEQIPPQCNVAYIFNPKLTVPELLRSICDEFGVAHRPAIPGAETVKDCLDPLN HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH DFLLQQHAAGRNNVLIIDEAQNLAPDVLEQLRLLTNLETSERKLLQIILIGQPELRAMVA HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHC APELEQLAQRVIARYHLDALSADETRQYIAHRMAVAGLQGPLPFQQRALARVHALTGGVP CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC RRINLLCDRALLGAYGAGVREVTDAMVRRAAREVFDAPATARPRPGSAGRWLAAGTGGLV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHH GAAALGGLAWALGWWPLADGGAGSTQAQTQTQRPAIAASAAAVPASSPASAASAPDAPAP HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCC PAPPPTLAQFLAIQPVAQAPAAWQALARQWQASVSDGAADPCAALASEGLRCYRSRRASL CCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NLLRQLDRPVLLMLRPAEGDAQGEALAPEVAVLLRRLDDGTATLEGVQGQTLQVRVTELA HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHC PLWRGEVATLWKAPAELADSGDVTATAAGAAWLDQQLAAAGAGAAAARTATPAARRARIH CHHCCCHHHHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHH QFQLGQGLTPDGRAGPLTLMLLNRAAGVPEPRLLSGA HHHCCCCCCCCCCCCCCHHEEEHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]