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The map label for this gene is ygiF [H]

Identifier: 222109590

GI number: 222109590

Start: 381855

End: 383393

Strand: Direct

Name: ygiF [H]

Synonym: Dtpsy_0370

Alternate gene names: 222109590

Gene position: 381855-383393 (Clockwise)

Preceding gene: 222109589

Following gene: 222109591

Centisome position: 10.06

GC content: 76.87

Gene sequence:

>1539_bases
ATGTCCGCCACCGAGACAGAGCTCAAGCTGGCGCTGCCCCCGCGCGATGCGGCGGCGCTGGCGGCGCGCCTCATGCGCGT
GCCGGCGCTGGCACGCGCCACGCCGGTGCGTGAGCACCTGGTCAGCCTCTACCACGACACGCCTGCGCAGGACCTGCTGC
GCCAGCGCGTCGCCCTGCGCCTGCGCCGCGAGGGGCCTGAGGGTGCGGGTGCCCGCTGGCTGCAGACCCTCAAGACCGCG
GGCGACACCACGTCCGCGCTGAGCCAGCGCGGCGAGTGGGAAATGCCCGTGGCCGGCCCGGCGCTGGAGCTGCACCGGTT
GGAGGGCACGCCCTGGCCCGCCATGGACCCCGATGGCGTGCTGGCCGGCGCGCTGCAGCCGTGCTTTACCACCGACTTCG
TGCGCACCCGCTGGCGTGTGCGGGTGCGCGGCGGCGCCGTGGTGGAGGTGGCGCTGGACGTGGGCGCCGTGACCGCCACG
GTGGACGGCGCGGCGCATGCCACGCCGCTGTGCGAACTGGAGCTGGAGTTGCTGCAGGGGCCCCCAGAGGCACTGCTGGC
GCTGGCGCGGCGCATCGCGCGGCACGTGCCGGTGCTGCCGCTGGCCGCGAGCAAGGCCGCACGCGGCTACGCGCTGCTGC
ACCCGCCGGCCAGCCCGGCCGTGGAGGCCCAGCCGCCCGCGCTGAAGCGCGGCATGACGGTTGCGCAGGTCGCCGAACGC
GTGCTGCAGGAGCCTTTCCACCAGTTCTGCGCCAACCTGTTTGCGCTGCAGCAGGGCAGCGATGCGCCCGAGGTGGTGCA
CCAGGCCCGCGTGGGCTGGCGCCGGCTGCGCAGCCTGGCGCGCCTCTTCGCCCCGGCCTGCGCCGCGCGGCCGGCCCCCG
CCGCCGCGGCGCTGGCGCCGCTGCTGCAGTCCCTGGGACATTTACGCGACCTGGATGTGGCGCGCACCCAGACGCTGCCT
GCGTTGGCCGCGCACTACGCGCAGGGCGGCGCGCGGCAGGCCGCCGCCTGGGCGGCAGCGCAGGCCGCGCTGGATGCCGC
CGCGGACCAGGCCCGCGCGCAAACGCGCGCCGCACTCCATCGGCCCGCCGTGGGCGCCGCGCTGCTGGCCTGGCAGGACT
GGTTGCATGGCTGGGCGCTGGCCGCGCAGGGGGAGTGTGGCGTGGAAGCCTGTGCCAGCGATGCCCTGGCCGGTGCGCCG
GCGCGGCACTGGGTGCGCAAGCGCGTCCAGCGGCTGGTACGGCGCCTGGGCGCGGCGCTCAAAACGGCGGGCGATGACGA
AGGCCTGCACCATGCCCGCATTCTCGCCAAGCGGTTGCGCTACGGCAGCACGTCGCTGGCGCCGCTGCTGCCCGGTCGCA
TGGGCCGCCACCGGGGCGCGGCCGAGCAGTGGCAGGAGCGCCTGGGCGCGCAGCGCGACTGGGCGCAGGCCGCCGCTCTG
GTGGCTGGCTGCGGGGGCGATGCCGCCGTGGTTGCCTTCCTGCGCGGGGCCGCGCTGGGGCGCGGCTGGGATCCCCTGCG
GGACGCCGCGCGCCGTTGA

Upstream 100 bases:

>100_bases
CCGACCTGCTGACCCAGCGCCTCACGGTGCACGAGCAAACGGCCTGGATGCTGCGCTCGCTGCTGGAGGACTGAGCGCAG
CTGCGCACGCGGGCCGGGCC

Downstream 100 bases:

>100_bases
ACGGCAGTCTTCCGGTCACGGACAGTGCCGTGCGACCATGTGGGCGCGCCGGCCGCCATGGCGTATAAAAGCGGGCTTTG
GCGCACGCTGGCGGGCACCC

Product: chad domain-containing protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSATETELKLALPPRDAAALAARLMRVPALARATPVREHLVSLYHDTPAQDLLRQRVALRLRREGPEGAGARWLQTLKTA
GDTTSALSQRGEWEMPVAGPALELHRLEGTPWPAMDPDGVLAGALQPCFTTDFVRTRWRVRVRGGAVVEVALDVGAVTAT
VDGAAHATPLCELELELLQGPPEALLALARRIARHVPVLPLAASKAARGYALLHPPASPAVEAQPPALKRGMTVAQVAER
VLQEPFHQFCANLFALQQGSDAPEVVHQARVGWRRLRSLARLFAPACAARPAPAAAALAPLLQSLGHLRDLDVARTQTLP
ALAAHYAQGGARQAAAWAAAQAALDAAADQARAQTRAALHRPAVGAALLAWQDWLHGWALAAQGECGVEACASDALAGAP
ARHWVRKRVQRLVRRLGAALKTAGDDEGLHHARILAKRLRYGSTSLAPLLPGRMGRHRGAAEQWQERLGAQRDWAQAAAL
VAGCGGDAAVVAFLRGAALGRGWDPLRDAARR

Sequences:

>Translated_512_residues
MSATETELKLALPPRDAAALAARLMRVPALARATPVREHLVSLYHDTPAQDLLRQRVALRLRREGPEGAGARWLQTLKTA
GDTTSALSQRGEWEMPVAGPALELHRLEGTPWPAMDPDGVLAGALQPCFTTDFVRTRWRVRVRGGAVVEVALDVGAVTAT
VDGAAHATPLCELELELLQGPPEALLALARRIARHVPVLPLAASKAARGYALLHPPASPAVEAQPPALKRGMTVAQVAER
VLQEPFHQFCANLFALQQGSDAPEVVHQARVGWRRLRSLARLFAPACAARPAPAAAALAPLLQSLGHLRDLDVARTQTLP
ALAAHYAQGGARQAAAWAAAQAALDAAADQARAQTRAALHRPAVGAALLAWQDWLHGWALAAQGECGVEACASDALAGAP
ARHWVRKRVQRLVRRLGAALKTAGDDEGLHHARILAKRLRYGSTSLAPLLPGRMGRHRGAAEQWQERLGAQRDWAQAAAL
VAGCGGDAAVVAFLRGAALGRGWDPLRDAARR
>Mature_511_residues
SATETELKLALPPRDAAALAARLMRVPALARATPVREHLVSLYHDTPAQDLLRQRVALRLRREGPEGAGARWLQTLKTAG
DTTSALSQRGEWEMPVAGPALELHRLEGTPWPAMDPDGVLAGALQPCFTTDFVRTRWRVRVRGGAVVEVALDVGAVTATV
DGAAHATPLCELELELLQGPPEALLALARRIARHVPVLPLAASKAARGYALLHPPASPAVEAQPPALKRGMTVAQVAERV
LQEPFHQFCANLFALQQGSDAPEVVHQARVGWRRLRSLARLFAPACAARPAPAAAALAPLLQSLGHLRDLDVARTQTLPA
LAAHYAQGGARQAAAWAAAQAALDAAADQARAQTRAALHRPAVGAALLAWQDWLHGWALAAQGECGVEACASDALAGAPA
RHWVRKRVQRLVRRLGAALKTAGDDEGLHHARILAKRLRYGSTSLAPLLPGRMGRHRGAAEQWQERLGAQRDWAQAAALV
AGCGGDAAVVAFLRGAALGRGWDPLRDAARR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=226, Percent_Identity=36.283185840708, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 54478; Mature: 54347

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATETELKLALPPRDAAALAARLMRVPALARATPVREHLVSLYHDTPAQDLLRQRVALR
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LRREGPEGAGARWLQTLKTAGDTTSALSQRGEWEMPVAGPALELHRLEGTPWPAMDPDGV
HHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCH
LAGALQPCFTTDFVRTRWRVRVRGGAVVEVALDVGAVTATVDGAAHATPLCELELELLQG
HHHHCCHHHHHHHHHHCEEEEECCCEEEEEEECCCHHHEEECCCHHCCCHHHHHHHHHCC
PPEALLALARRIARHVPVLPLAASKAARGYALLHPPASPAVEAQPPALKRGMTVAQVAER
CHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCHHHHCCHHHHHHHH
VLQEPFHQFCANLFALQQGSDAPEVVHQARVGWRRLRSLARLFAPACAARPAPAAAALAP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLQSLGHLRDLDVARTQTLPALAAHYAQGGARQAAAWAAAQAALDAAADQARAQTRAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPAVGAALLAWQDWLHGWALAAQGECGVEACASDALAGAPARHWVRKRVQRLVRRLGAAL
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KTAGDDEGLHHARILAKRLRYGSTSLAPLLPGRMGRHRGAAEQWQERLGAQRDWAQAAAL
HCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
VAGCGGDAAVVAFLRGAALGRGWDPLRDAARR
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
SATETELKLALPPRDAAALAARLMRVPALARATPVREHLVSLYHDTPAQDLLRQRVALR
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LRREGPEGAGARWLQTLKTAGDTTSALSQRGEWEMPVAGPALELHRLEGTPWPAMDPDGV
HHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCH
LAGALQPCFTTDFVRTRWRVRVRGGAVVEVALDVGAVTATVDGAAHATPLCELELELLQG
HHHHCCHHHHHHHHHHCEEEEECCCEEEEEEECCCHHHEEECCCHHCCCHHHHHHHHHCC
PPEALLALARRIARHVPVLPLAASKAARGYALLHPPASPAVEAQPPALKRGMTVAQVAER
CHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCHHHHCCHHHHHHHH
VLQEPFHQFCANLFALQQGSDAPEVVHQARVGWRRLRSLARLFAPACAARPAPAAAALAP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLQSLGHLRDLDVARTQTLPALAAHYAQGGARQAAAWAAAQAALDAAADQARAQTRAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPAVGAALLAWQDWLHGWALAAQGECGVEACASDALAGAPARHWVRKRVQRLVRRLGAAL
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KTAGDDEGLHHARILAKRLRYGSTSLAPLLPGRMGRHRGAAEQWQERLGAQRDWAQAAAL
HCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
VAGCGGDAAVVAFLRGAALGRGWDPLRDAARR
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]