Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109509

Identifier: 222109509

GI number: 222109509

Start: 299916

End: 301154

Strand: Direct

Name: 222109509

Synonym: Dtpsy_0289

Alternate gene names: NA

Gene position: 299916-301154 (Clockwise)

Preceding gene: 222109508

Following gene: 222109510

Centisome position: 7.9

GC content: 70.06

Gene sequence:

>1239_bases
ATGAGCGTGCTCACGCGGCGCACGGCCGTGGTCGTCTTCCTGGCCTTTGCGTTCACCTACTTCATCTCGGCGCTGTTGCG
CGCGATCACCGCCACTCTGGCGCCCACACTGGAGGCCGAGTTCCAGTTGCACGCGCGCGACCTGGGGCTGCTGGCGGGTG
GCTACTTCCTGGGTTTCTCGCTCACGCAACTGCCGCTGGGCCGGTGGCTGGATCGTCACGGCCCGCGCGTGGTGCTGCTG
GGCTTTCTGGGCGTGGCGGTGGCGGGGTGCCTGGTGTTCTCCTGGGCCACGGGCTTCTCGGGGCTGCTTGCGGGGCGCAT
GCTGTGCGGCGCGGGCGTCAGCGCCTGCCTGATGGCTCCGCTCACGGGATTCCGGCGCTGGCTGGAGCCTGGTGCGCAGC
TGCGCGCCAACTCCTGGATGCTGATGACCGGTTCGCTGGGCATGGTGGCGTCCACTCTGCCGGTGCAGTGGCTGCTGCCA
CTGGCAGGGTGGCGCCCGTTGTTCTGGGGGCTGGCGGCGCTCATCGTGCTGGCCATGGCGCTGCTGGCGCTGGGCGTGCC
GCGCTGGCCGCAGGCGCCGGCAGAGTCGGGAGCAGGCGTAGAAACGGGCTATGCACAGGTGTGGCGCCATCCGTACTTCC
TGCGCACGGCGCCGCTGGGCTTCTTCTGCTATGGCGGCATGGTCGCGGTGCAGACGCTGTGGGCCGCGCCCTGGATGCAG
CACGTGGCCGGCTATACGCCGTTGCAGGCCGCCACCGGGCTGTTCTGGATCAATGTGAGCATGCTGATCACCTTCTGGAC
CTGGGGCATGGCCAGCCCGTGGTTGCTGCGCCGCGTGGGCGGGGCCGACCCGGTAATGGCCGCGAGTTTGCCGCTGTCGC
TGCTGGTGCTGGCGGGCATTGTGTTGGCGGGCGGACGTGCGGGCGCCGCGGCCTGGGCGCTGTATTGCGTGTCATGCACC
AGCGTGGCTCTGTCGCAGCCCGCGGTGGCATTGGCGTTCCCGCAGGCGCTGGCGGGGCGCGCGCTGTCGGCGTACAACCT
GGTGATCTTTGCGGGGGTGTTTGCCGTGCAATGGGGTATTGGCCTGGCGGTGGACGCGTTCGTGGCCGCCGGGCTGGACA
TGGCGCGCGCCTACCGGGCCGCCATGGCGCTGCACCTGGCCTGCACGGCGGGGGCCTATGCATGGTTCATGGCGCGGCGC
GGGCACGGTGATAATGCACTGCACTGCAGTACCCCATGA

Upstream 100 bases:

>100_bases
AGGGCGGCCAGGCACGTCTGTACCACGCGGCGGTCTATGCGCCGCGTCGCACGACGGCCACGGCGGCTGACACCTTCTTC
GCCAGCCTGGCGCTGCAGCC

Downstream 100 bases:

>100_bases
ATACGCGCCTTCTCATCATCGCCCACGCCCCTTTGGCCCATGCGCTGCGTGAGTGCGCGCTGCACGTGTTCCCCGACTGC
TGGCAGGAGGTGCTGGCGCT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Carbohydrate Transport Membrane Protein; MFS Family Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MSVLTRRTAVVVFLAFAFTYFISALLRAITATLAPTLEAEFQLHARDLGLLAGGYFLGFSLTQLPLGRWLDRHGPRVVLL
GFLGVAVAGCLVFSWATGFSGLLAGRMLCGAGVSACLMAPLTGFRRWLEPGAQLRANSWMLMTGSLGMVASTLPVQWLLP
LAGWRPLFWGLAALIVLAMALLALGVPRWPQAPAESGAGVETGYAQVWRHPYFLRTAPLGFFCYGGMVAVQTLWAAPWMQ
HVAGYTPLQAATGLFWINVSMLITFWTWGMASPWLLRRVGGADPVMAASLPLSLLVLAGIVLAGGRAGAAAWALYCVSCT
SVALSQPAVALAFPQALAGRALSAYNLVIFAGVFAVQWGIGLAVDAFVAAGLDMARAYRAAMALHLACTAGAYAWFMARR
GHGDNALHCSTP

Sequences:

>Translated_412_residues
MSVLTRRTAVVVFLAFAFTYFISALLRAITATLAPTLEAEFQLHARDLGLLAGGYFLGFSLTQLPLGRWLDRHGPRVVLL
GFLGVAVAGCLVFSWATGFSGLLAGRMLCGAGVSACLMAPLTGFRRWLEPGAQLRANSWMLMTGSLGMVASTLPVQWLLP
LAGWRPLFWGLAALIVLAMALLALGVPRWPQAPAESGAGVETGYAQVWRHPYFLRTAPLGFFCYGGMVAVQTLWAAPWMQ
HVAGYTPLQAATGLFWINVSMLITFWTWGMASPWLLRRVGGADPVMAASLPLSLLVLAGIVLAGGRAGAAAWALYCVSCT
SVALSQPAVALAFPQALAGRALSAYNLVIFAGVFAVQWGIGLAVDAFVAAGLDMARAYRAAMALHLACTAGAYAWFMARR
GHGDNALHCSTP
>Mature_411_residues
SVLTRRTAVVVFLAFAFTYFISALLRAITATLAPTLEAEFQLHARDLGLLAGGYFLGFSLTQLPLGRWLDRHGPRVVLLG
FLGVAVAGCLVFSWATGFSGLLAGRMLCGAGVSACLMAPLTGFRRWLEPGAQLRANSWMLMTGSLGMVASTLPVQWLLPL
AGWRPLFWGLAALIVLAMALLALGVPRWPQAPAESGAGVETGYAQVWRHPYFLRTAPLGFFCYGGMVAVQTLWAAPWMQH
VAGYTPLQAATGLFWINVSMLITFWTWGMASPWLLRRVGGADPVMAASLPLSLLVLAGIVLAGGRAGAAAWALYCVSCTS
VALSQPAVALAFPQALAGRALSAYNLVIFAGVFAVQWGIGLAVDAFVAAGLDMARAYRAAMALHLACTAGAYAWFMARRG
HGDNALHCSTP

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43751; Mature: 43620

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLTRRTAVVVFLAFAFTYFISALLRAITATLAPTLEAEFQLHARDLGLLAGGYFLGFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLPLGRWLDRHGPRVVLLGFLGVAVAGCLVFSWATGFSGLLAGRMLCGAGVSACLMAP
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LTGFRRWLEPGAQLRANSWMLMTGSLGMVASTLPVQWLLPLAGWRPLFWGLAALIVLAMA
HHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH
LLALGVPRWPQAPAESGAGVETGYAQVWRHPYFLRTAPLGFFCYGGMVAVQTLWAAPWMQ
HHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
HVAGYTPLQAATGLFWINVSMLITFWTWGMASPWLLRRVGGADPVMAASLPLSLLVLAGI
HHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VLAGGRAGAAAWALYCVSCTSVALSQPAVALAFPQALAGRALSAYNLVIFAGVFAVQWGI
HHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHCC
GLAVDAFVAAGLDMARAYRAAMALHLACTAGAYAWFMARRGHGDNALHCSTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
>Mature Secondary Structure 
SVLTRRTAVVVFLAFAFTYFISALLRAITATLAPTLEAEFQLHARDLGLLAGGYFLGFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLPLGRWLDRHGPRVVLLGFLGVAVAGCLVFSWATGFSGLLAGRMLCGAGVSACLMAP
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LTGFRRWLEPGAQLRANSWMLMTGSLGMVASTLPVQWLLPLAGWRPLFWGLAALIVLAMA
HHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH
LLALGVPRWPQAPAESGAGVETGYAQVWRHPYFLRTAPLGFFCYGGMVAVQTLWAAPWMQ
HHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
HVAGYTPLQAATGLFWINVSMLITFWTWGMASPWLLRRVGGADPVMAASLPLSLLVLAGI
HHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VLAGGRAGAAAWALYCVSCTSVALSQPAVALAFPQALAGRALSAYNLVIFAGVFAVQWGI
HHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHCC
GLAVDAFVAAGLDMARAYRAAMALHLACTAGAYAWFMARRGHGDNALHCSTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA