| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109470
Identifier: 222109470
GI number: 222109470
Start: 268650
End: 269228
Strand: Direct
Name: 222109470
Synonym: Dtpsy_0250
Alternate gene names: NA
Gene position: 268650-269228 (Clockwise)
Preceding gene: 222109469
Following gene: 222109471
Centisome position: 7.08
GC content: 63.9
Gene sequence:
>579_bases ATGAAAAACGCACGCAATCTTCTGGCCCTGGCGGCCGCTGCCCTGATGGCCACTTCGGGCATGGCCATGACCAAGGAGGA ATACAACGCCGGCAAGGACCGCATCGGCGCTGACTACAAGGCCGCCAAGGCGCAGTGCGACACCCTGCAGGGCAACGCCA AGGACGTCTGCATGAAGGAGGCCAAGGGCCGCGAGAAGGTGGCCAAGGCCGAGTTGGAAGCCCAGTACAAGCCCAGCGAC AAGGCCACCTACAACGTGAACGAGGCCCGTGCCGACGCTGACTATGAAGTGGCCAAGGAAAAATGCGACGACCAGAAGGG CGACGCCAAGGACATTTGCGTGAAGGACGCCAAGGCCGCCCATGTGGCCGCCAAGGAAAATGCCAAGGTGCAGCGCGCGC AGGCCAAGCCCGCCGACTCCACCGCCGAGAAGCGCGCCGATGTCGCAGAGGCCAAGAAGGACGCCGCAGAGGCCCAGCGC GAAGCCAACTACAAGGCTGCGAAGGAGCGCTGCGACACCATGAGCGGTGACGCCAAGGACAAGTGCGTGGCCGATGCCAA GCGCACCCACGGCCAATAA
Upstream 100 bases:
>100_bases AACCCCGACTTCCGCTACGACTGACGCAACGCGCCGCAGGGGCACGACTCGCGCGCCCTGCGGGATCCAATTTCCATCAC ATTCATCTGGAGGACATTCC
Downstream 100 bases:
>100_bases ACCGGCAAACACGTGCAGCCCCGCCTCTGGCGGGGCTTTTTTTGTCCCCACGAGCGGCACCGACATGACATGTGTCAATA CCGCCGGTGGCGGTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKNARNLLALAAAALMATSGMAMTKEEYNAGKDRIGADYKAAKAQCDTLQGNAKDVCMKEAKGREKVAKAELEAQYKPSD KATYNVNEARADADYEVAKEKCDDQKGDAKDICVKDAKAAHVAAKENAKVQRAQAKPADSTAEKRADVAEAKKDAAEAQR EANYKAAKERCDTMSGDAKDKCVADAKRTHGQ
Sequences:
>Translated_192_residues MKNARNLLALAAAALMATSGMAMTKEEYNAGKDRIGADYKAAKAQCDTLQGNAKDVCMKEAKGREKVAKAELEAQYKPSD KATYNVNEARADADYEVAKEKCDDQKGDAKDICVKDAKAAHVAAKENAKVQRAQAKPADSTAEKRADVAEAKKDAAEAQR EANYKAAKERCDTMSGDAKDKCVADAKRTHGQ >Mature_192_residues MKNARNLLALAAAALMATSGMAMTKEEYNAGKDRIGADYKAAKAQCDTLQGNAKDVCMKEAKGREKVAKAELEAQYKPSD KATYNVNEARADADYEVAKEKCDDQKGDAKDICVKDAKAAHVAAKENAKVQRAQAKPADSTAEKRADVAEAKKDAAEAQR EANYKAAKERCDTMSGDAKDKCVADAKRTHGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20635; Mature: 20635
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNARNLLALAAAALMATSGMAMTKEEYNAGKDRIGADYKAAKAQCDTLQGNAKDVCMKE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHH AKGREKVAKAELEAQYKPSDKATYNVNEARADADYEVAKEKCDDQKGDAKDICVKDAKAA HCCHHHHHHHHHHHCCCCCCCCEECCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCHHH HVAAKENAKVQRAQAKPADSTAEKRADVAEAKKDAAEAQREANYKAAKERCDTMSGDAKD HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KCVADAKRTHGQ HHHHHHHHHCCC >Mature Secondary Structure MKNARNLLALAAAALMATSGMAMTKEEYNAGKDRIGADYKAAKAQCDTLQGNAKDVCMKE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHH AKGREKVAKAELEAQYKPSDKATYNVNEARADADYEVAKEKCDDQKGDAKDICVKDAKAA HCCHHHHHHHHHHHCCCCCCCCEECCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCHHH HVAAKENAKVQRAQAKPADSTAEKRADVAEAKKDAAEAQREANYKAAKERCDTMSGDAKD HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KCVADAKRTHGQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA