Click here to switch to the map view.

The map label for this gene is yjbJ [C]

Identifier: 222109469

GI number: 222109469

Start: 268358

End: 268573

Strand: Direct

Name: yjbJ [C]

Synonym: Dtpsy_0249

Alternate gene names: 222109469

Gene position: 268358-268573 (Clockwise)

Preceding gene: 222109468

Following gene: 222109470

Centisome position: 7.07

GC content: 62.96

Gene sequence:

>216_bases
ATGAACGAAGACCGCATTGAAGGCAACTGGAAGCAGTTCAAGGGCAAAGTGAAGGAGCAATGGGGCAAGCTGACCGACGA
CGACCTGGACGTCATCGCCGGCAAGCGCGACCAGCTGCTGGGCAAGCTGCAGGAGCGCCACGGGCTGGCCCGGGAGGCAG
CCGAGGAACAGCTCAAGGGCTGGGAACAGCGCAACCCCGACTTCCGCTACGACTGA

Upstream 100 bases:

>100_bases
CCGGGCACCTGCCTAGAGTCCATTCATCGCCTCGCAATGCCCGGCGCTGTACAGGGGCCAGGCAGGCGATCCCTCAACAA
CCGCCACAGGAGAGTGACGT

Downstream 100 bases:

>100_bases
CGCAACGCGCCGCAGGGGCACGACTCGCGCGCCCTGCGGGATCCAATTTCCATCACATTCATCTGGAGGACATTCCATGA
AAAACGCACGCAATCTTCTG

Product: csbd family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MNEDRIEGNWKQFKGKVKEQWGKLTDDDLDVIAGKRDQLLGKLQERHGLAREAAEEQLKGWEQRNPDFRYD

Sequences:

>Translated_71_residues
MNEDRIEGNWKQFKGKVKEQWGKLTDDDLDVIAGKRDQLLGKLQERHGLAREAAEEQLKGWEQRNPDFRYD
>Mature_71_residues
MNEDRIEGNWKQFKGKVKEQWGKLTDDDLDVIAGKRDQLLGKLQERHGLAREAAEEQLKGWEQRNPDFRYD

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

Organism=Escherichia coli, GI1790479, Length=65, Percent_Identity=66.1538461538461, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 8428; Mature: 8428

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDRIEGNWKQFKGKVKEQWGKLTDDDLDVIAGKRDQLLGKLQERHGLAREAAEEQLKG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
WEQRNPDFRYD
HHHCCCCCCCC
>Mature Secondary Structure
MNEDRIEGNWKQFKGKVKEQWGKLTDDDLDVIAGKRDQLLGKLQERHGLAREAAEEQLKG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
WEQRNPDFRYD
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA