BacMap

Definition	Acidovorax ebreus TPSY chromosome, complete genome.
Accession	NC_011992
Length	3,796,573

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 222109398

GI number: 222109398

Start: 198938

End: 199747

Strand: Direct

Name: fabG [H]

Synonym: Dtpsy_0177

Alternate gene names: 222109398

Gene position: 198938-199747 (Clockwise)

Preceding gene: 222109396

Following gene: 222109401

Centisome position: 5.24

GC content: 69.75

Gene sequence:

>810_bases
ATGGCCCACGCCGCATCTTCTTCCTCTTCGACAGTGACCGCAGGCATCGCCACCCGCCCGGTCATCGCCCTCATCACCGG
CGGCAGCCGGGGGCTGGGCCGCAATGCCGCGCTGCACGTGGCGCGGTCCGGCACCGATGTGATCCTGACCTACCGCAGCC
AGGCCGCCGAGGCGCAGGCCGTCGTCGCAGAGATCGAGGCCCTCGGCCGCCGCGCCGTGGCGCTGCCCCTGGACGTGGCG
GCCAGCGCCACCTTCACCGCTTTCGCAGGCCAGGTGCGCGACGTGCTGGCGCGGCACTGGCAGCGCGAGCGCTTCGACTT
CCTCGTGAACAACGCGGGCGTGGGCGTGTATGCCAGCTTCATGGAGACCACCGAGGCGCAGTTCGACGACATGGTCAACA
TTCACCTCAAGGGCGTGTTTTTCCTCACACAGAAGCTGCTGCCGCTGATGAACGACGGCGGGCGCATCCTGAACGTGTCG
TCGGGCCTGGCGCGGTTCGCGCTACCGGGCTACGCGGCCTATGCGGCGATGAAGGGCGGGGTGGAGGTGCTGACGCGCTA
CCTGGCCAAGGAACTGGGCGCCCGCGGCATTGCCGTGAACGTGGTGGCGCCTGGTGCGATCGAGACGGATTTTGGCGGCG
GCGCCGTGCGCGACAACGCGCAGCTCAACGCCTTCATCGCCGGCCAGACCGCGCTGGGCCGCGTGGGCCTGCCGGACGAC
ATCGGTGGCGTGATCGCTGCGCTGCTGCAGCCCGGCACGGGCTGGGTGAACGCGCAGCGCATCGAGGCATCGGGCGGCAT
GTTCGTTTGA

Upstream 100 bases:

>100_bases
CAAAAGAACGATGCGATCAATTTTCAGTGATTTATGAATGTGGAGCGGATCAATAGAGTTCGCTCACTGCTCTCTCACTC
CTCACTGAAAGGTTCCCGCC

Downstream 100 bases:

>100_bases
CGCCCGGCAGCGGGGCTGCGCCTGGTTGCTTTACTGCATTTTTGGGCTGTAGCGCTTGTTAAATCAGCGCTAACAGCTAT
AAATAACGTAGCAAAACGGG

Product: short-chain dehydrogenase/reductase sdr

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MAHAASSSSSTVTAGIATRPVIALITGGSRGLGRNAALHVARSGTDVILTYRSQAAEAQAVVAEIEALGRRAVALPLDVA
ASATFTAFAGQVRDVLARHWQRERFDFLVNNAGVGVYASFMETTEAQFDDMVNIHLKGVFFLTQKLLPLMNDGGRILNVS
SGLARFALPGYAAYAAMKGGVEVLTRYLAKELGARGIAVNVVAPGAIETDFGGGAVRDNAQLNAFIAGQTALGRVGLPDD
IGGVIAALLQPGTGWVNAQRIEASGGMFV

Sequences:

>Translated_269_residues
MAHAASSSSSTVTAGIATRPVIALITGGSRGLGRNAALHVARSGTDVILTYRSQAAEAQAVVAEIEALGRRAVALPLDVA
ASATFTAFAGQVRDVLARHWQRERFDFLVNNAGVGVYASFMETTEAQFDDMVNIHLKGVFFLTQKLLPLMNDGGRILNVS
SGLARFALPGYAAYAAMKGGVEVLTRYLAKELGARGIAVNVVAPGAIETDFGGGAVRDNAQLNAFIAGQTALGRVGLPDD
IGGVIAALLQPGTGWVNAQRIEASGGMFV
>Mature_268_residues
AHAASSSSSTVTAGIATRPVIALITGGSRGLGRNAALHVARSGTDVILTYRSQAAEAQAVVAEIEALGRRAVALPLDVAA
SATFTAFAGQVRDVLARHWQRERFDFLVNNAGVGVYASFMETTEAQFDDMVNIHLKGVFFLTQKLLPLMNDGGRILNVSS
GLARFALPGYAAYAAMKGGVEVLTRYLAKELGARGIAVNVVAPGAIETDFGGGAVRDNAQLNAFIAGQTALGRVGLPDDI
GGVIAALLQPGTGWVNAQRIEASGGMFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=30.3643724696356, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=28.735632183908, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=27.4193548387097, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=32.1243523316062, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI4557649, Length=195, Percent_Identity=28.2051282051282, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=24.4186046511628, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=28.1124497991968, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI209862901, Length=201, Percent_Identity=28.8557213930348, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI19923983, Length=201, Percent_Identity=28.8557213930348, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=24.1935483870968, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI225579078, Length=206, Percent_Identity=31.0679611650485, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI44680136, Length=185, Percent_Identity=29.1891891891892, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI44680133, Length=185, Percent_Identity=29.1891891891892, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI17738292, Length=185, Percent_Identity=29.1891891891892, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4503817, Length=190, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=31.2, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=33.2, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=33.0645161290323, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=28.8, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI2367175, Length=260, Percent_Identity=33.4615384615385, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=29.7619047619048, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=31.2252964426877, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI2367365, Length=236, Percent_Identity=31.3559322033898, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=31.9838056680162, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082160, Length=259, Percent_Identity=26.6409266409266, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786701, Length=246, Percent_Identity=29.6747967479675, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787526, Length=191, Percent_Identity=30.8900523560209, Blast_Score=68, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=28.8537549407115, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=31.5589353612167, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=241, Percent_Identity=32.7800829875519, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=27.2, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=27.6679841897233, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=29.8449612403101, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=27.1653543307087, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=31.9548872180451, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=30.6818181818182, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=30.6513409961686, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI115534694, Length=199, Percent_Identity=29.6482412060301, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=255, Percent_Identity=27.4509803921569, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=30.2681992337165, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17555706, Length=258, Percent_Identity=27.5193798449612, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=29.6153846153846, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=30.8880308880309, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=30.2564102564103, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=254, Percent_Identity=30.7086614173228, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=29.6577946768061, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=29.1828793774319, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=29.811320754717, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=29.8850574712644, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17558990, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=28.957528957529, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=197, Percent_Identity=32.48730964467, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=26.5625, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25152911, Length=237, Percent_Identity=26.5822784810127, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=27.3684210526316, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=27.3684210526316, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=23.7154150197628, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6322861, Length=197, Percent_Identity=32.994923857868, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=35.2, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=32.258064516129, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI28571526, Length=229, Percent_Identity=33.1877729257642, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644339, Length=234, Percent_Identity=31.1965811965812, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI21355319, Length=262, Percent_Identity=27.4809160305344, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21357041, Length=228, Percent_Identity=29.3859649122807, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24651139, Length=220, Percent_Identity=32.2727272727273, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI21358495, Length=221, Percent_Identity=33.0316742081448, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI23397609, Length=193, Percent_Identity=30.0518134715026, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24644337, Length=167, Percent_Identity=32.9341317365269, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI18859837, Length=195, Percent_Identity=32.3076923076923, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17737361, Length=202, Percent_Identity=30.1980198019802, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27913; Mature: 27782

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAASSSSSTVTAGIATRPVIALITGGSRGLGRNAALHVARSGTDVILTYRSQAAEAQA
CCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHH
VVAEIEALGRRAVALPLDVAASATFTAFAGQVRDVLARHWQRERFDFLVNNAGVGVYASF
HHHHHHHHCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH
METTEAQFDDMVNIHLKGVFFLTQKLLPLMNDGGRILNVSSGLARFALPGYAAYAAMKGG
HHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHHCC
VEVLTRYLAKELGARGIAVNVVAPGAIETDFGGGAVRDNAQLNAFIAGQTALGRVGLPDD
HHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCEECCCCEEEEEEECCHHCCCCCCCHH
IGGVIAALLQPGTGWVNAQRIEASGGMFV
HHHHHHHHHCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
AHAASSSSSTVTAGIATRPVIALITGGSRGLGRNAALHVARSGTDVILTYRSQAAEAQA
CCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHH
VVAEIEALGRRAVALPLDVAASATFTAFAGQVRDVLARHWQRERFDFLVNNAGVGVYASF
HHHHHHHHCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH
METTEAQFDDMVNIHLKGVFFLTQKLLPLMNDGGRILNVSSGLARFALPGYAAYAAMKGG
HHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHHCC
VEVLTRYLAKELGARGIAVNVVAPGAIETDFGGGAVRDNAQLNAFIAGQTALGRVGLPDD
HHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCEECCCCEEEEEEECCHHCCCCCCCHH
IGGVIAALLQPGTGWVNAQRIEASGGMFV
HHHHHHHHHCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]