| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is livK [C]
Identifier: 222109393
GI number: 222109393
Start: 193128
End: 194315
Strand: Direct
Name: livK [C]
Synonym: Dtpsy_0172
Alternate gene names: 222109393
Gene position: 193128-194315 (Clockwise)
Preceding gene: 222109391
Following gene: 222109394
Centisome position: 5.09
GC content: 67.0
Gene sequence:
>1188_bases ATGCACAAGCCCTTCACCCCCCTGCTCGCCCTGCTGTTTGCGGGTGGCGCCTATGCGCAGGGGGCCTACACGATCGGGGA GATCAACAGCTACAAGGCCCAGCCCGCCTTCCTGGAGCCCTACAAGAAGGGCATGGAACTGGCGGTCGAGCAGATCAATG CGGCCGGCGGCATCCAGGGCAAGCAGCTGCGGCTGGTCACGCGCGACGACAACGCCACCCCCGGCGACGCGGTGCGCGCG GCCGAGGAACTGATCGCGCGCGAGAAGGTGGATGTGCTCATGGGCAGCTTTCTGTCGCACGTGGGCCTGGCGCTGACCGA CTTCGCGCAGCAGAAGAAGCGCTTCTTCCTGGCGGCCGAACCGCTCACCGACAAGATCGTGTGGGAGCACGGCAACCGCT ACACCTTCCGCCTGCGCCCCTCCACCTACATGCAGGTGGCCATGCTGGTGCCCGAAGCCGTGGCGCTGAAAAAAAAGCGC TGGGCCATCGTCTACCCCAACTACGAGTACGGCCAGTCGGCCGTGGCCACCTTCAAGCAGCTGCTCAAGGCCGCGCAGCC GGACGTGGAGTTCGTTGCCGAGCAGGCCACGCCGCTGGGCAAGGTGGACGCCGGCAGCGTGGCGCAGGCGCTGGAAGACG CCAAGCCCGATGCGATCTTCAACGTGCTGTTCGCCGCCGACCTCGCCAAATTCGTGCGCGAGGGCAACACCCGCGGGCTG TTCGCGGGCCGCAGCGTGGTGAGCCTGCTGTCGGGCGAGCCGGAATACCTGGACACGCTCAAGAGCGAGACGCCCGAGGG CTGGATCGTCACCGGCTACCCCTGGTATGCCATCCAGACCCCCGAGCACAAGGCCTTTCTGGACGCCTACATGAAGCGTT TCAAGGACTACCCGCGCGCGGGCTCGGTGGTGGGCTACAACGCCGTCCAGTCGGTTGCGGCGGGGCTGGCCAAGGCCGGA TCGGCCGACACCGAGAAACTCATCACCGCCTTCCGCGGCCTGCAGGTGGCCACGCCGTTCGGTCCCATCACCTACCGCAC GCAGGACCACCAGTCCACCATGGGTGCCTACGTGGGCAAGACCGCGCTGCGCATGGGCAAGGGTGTGATGGTGGACTTCA CCTACCGCGACGGCGCCAAGTACCAGCCCAGCGACGCCGAGGTGAAGCGGCTGCGCAAGGACGAGTGA
Upstream 100 bases:
>100_bases GCCCCCTGCCATGCGGGCAAACCCGCACATTGTCGGGCAAACTCGTGGCAGCGGTACAGTTGCGTTGCCCGGAAGCTGAC CTGTGGCAAAGGATTCGACC
Downstream 100 bases:
>100_bases CCGCCGGACTCTGCGCCGGCGCCCTTCCCGTGGGGGAACGCGCGGCCGCTACCGCGGGGCGACCCGGGCGCTATGGCTGC GGGCTTCAACCGCGCGGGCT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MHKPFTPLLALLFAGGAYAQGAYTIGEINSYKAQPAFLEPYKKGMELAVEQINAAGGIQGKQLRLVTRDDNATPGDAVRA AEELIAREKVDVLMGSFLSHVGLALTDFAQQKKRFFLAAEPLTDKIVWEHGNRYTFRLRPSTYMQVAMLVPEAVALKKKR WAIVYPNYEYGQSAVATFKQLLKAAQPDVEFVAEQATPLGKVDAGSVAQALEDAKPDAIFNVLFAADLAKFVREGNTRGL FAGRSVVSLLSGEPEYLDTLKSETPEGWIVTGYPWYAIQTPEHKAFLDAYMKRFKDYPRAGSVVGYNAVQSVAAGLAKAG SADTEKLITAFRGLQVATPFGPITYRTQDHQSTMGAYVGKTALRMGKGVMVDFTYRDGAKYQPSDAEVKRLRKDE
Sequences:
>Translated_395_residues MHKPFTPLLALLFAGGAYAQGAYTIGEINSYKAQPAFLEPYKKGMELAVEQINAAGGIQGKQLRLVTRDDNATPGDAVRA AEELIAREKVDVLMGSFLSHVGLALTDFAQQKKRFFLAAEPLTDKIVWEHGNRYTFRLRPSTYMQVAMLVPEAVALKKKR WAIVYPNYEYGQSAVATFKQLLKAAQPDVEFVAEQATPLGKVDAGSVAQALEDAKPDAIFNVLFAADLAKFVREGNTRGL FAGRSVVSLLSGEPEYLDTLKSETPEGWIVTGYPWYAIQTPEHKAFLDAYMKRFKDYPRAGSVVGYNAVQSVAAGLAKAG SADTEKLITAFRGLQVATPFGPITYRTQDHQSTMGAYVGKTALRMGKGVMVDFTYRDGAKYQPSDAEVKRLRKDE >Mature_395_residues MHKPFTPLLALLFAGGAYAQGAYTIGEINSYKAQPAFLEPYKKGMELAVEQINAAGGIQGKQLRLVTRDDNATPGDAVRA AEELIAREKVDVLMGSFLSHVGLALTDFAQQKKRFFLAAEPLTDKIVWEHGNRYTFRLRPSTYMQVAMLVPEAVALKKKR WAIVYPNYEYGQSAVATFKQLLKAAQPDVEFVAEQATPLGKVDAGSVAQALEDAKPDAIFNVLFAADLAKFVREGNTRGL FAGRSVVSLLSGEPEYLDTLKSETPEGWIVTGYPWYAIQTPEHKAFLDAYMKRFKDYPRAGSVVGYNAVQSVAAGLAKAG SADTEKLITAFRGLQVATPFGPITYRTQDHQSTMGAYVGKTALRMGKGVMVDFTYRDGAKYQPSDAEVKRLRKDE
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=309, Percent_Identity=25.2427184466019, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43388; Mature: 43388
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKPFTPLLALLFAGGAYAQGAYTIGEINSYKAQPAFLEPYKKGMELAVEQINAAGGIQG CCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC KQLRLVTRDDNATPGDAVRAAEELIAREKVDVLMGSFLSHVGLALTDFAQQKKRFFLAAE CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC PLTDKIVWEHGNRYTFRLRPSTYMQVAMLVPEAVALKKKRWAIVYPNYEYGQSAVATFKQ CCCCHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCHHHHHHHHH LLKAAQPDVEFVAEQATPLGKVDAGSVAQALEDAKPDAIFNVLFAADLAKFVREGNTRGL HHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCE FAGRSVVSLLSGEPEYLDTLKSETPEGWIVTGYPWYAIQTPEHKAFLDAYMKRFKDYPRA EHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCC GSVVGYNAVQSVAAGLAKAGSADTEKLITAFRGLQVATPFGPITYRTQDHQSTMGAYVGK CCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCEEECCCCHHHHHHHHHHH TALRMGKGVMVDFTYRDGAKYQPSDAEVKRLRKDE HHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MHKPFTPLLALLFAGGAYAQGAYTIGEINSYKAQPAFLEPYKKGMELAVEQINAAGGIQG CCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC KQLRLVTRDDNATPGDAVRAAEELIAREKVDVLMGSFLSHVGLALTDFAQQKKRFFLAAE CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC PLTDKIVWEHGNRYTFRLRPSTYMQVAMLVPEAVALKKKRWAIVYPNYEYGQSAVATFKQ CCCCHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCHHHHHHHHH LLKAAQPDVEFVAEQATPLGKVDAGSVAQALEDAKPDAIFNVLFAADLAKFVREGNTRGL HHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCE FAGRSVVSLLSGEPEYLDTLKSETPEGWIVTGYPWYAIQTPEHKAFLDAYMKRFKDYPRA EHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCC GSVVGYNAVQSVAAGLAKAGSADTEKLITAFRGLQVATPFGPITYRTQDHQSTMGAYVGK CCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCEEECCCCHHHHHHHHHHH TALRMGKGVMVDFTYRDGAKYQPSDAEVKRLRKDE HHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA