| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is livK [C]
Identifier: 222109312
GI number: 222109312
Start: 96844
End: 98034
Strand: Direct
Name: livK [C]
Synonym: Dtpsy_0089
Alternate gene names: 222109312
Gene position: 96844-98034 (Clockwise)
Preceding gene: 222109311
Following gene: 222109314
Centisome position: 2.55
GC content: 68.51
Gene sequence:
>1191_bases ATGATGGCCATGAGACCCAGACACTGGGCAGGGGCGCTGGCGCTGTGGGCGTTGGCAGGCATGGCGGGCGCCCAGCCCGT GAAGGTGGGGGTCATCGGCCCCTTTTCGGGGCCGTCGTCGGACTTCGGCACGCCCATGCTGCAGGGCATCCAGCTCGCGG TGGAGCAGTTCAACGCCGTGGGAGGCTACCTGGGCCGACCCGTGGAGCTGGTGGTCAAGGACGACCAGGGCTCGCCCGAC ACCGGCCGTCAACGCTCGCAGGAACTGGCCAAAGAAGGCGTGGTGGCTGCCCTGGGCTTTTGCAACACCGGCGTGGCGAT GAAATCGCTGGACGTGTTCCAGCAGGCGAAGCTGCCCTTGATCGTGCCGTGCGCCACGGGCACCCCCGTGACACGCACCT ATCCGGCGGCGCAGAGCTTCATCTTCCGCACCTCGGCCCCCGACAACATCCAGGCGCCCTTCGTGGTGGAGGACATCCTG CGCCGCGGCTGGACGCGGGTCGCTCTCTTTGCCGACGACACCGGCTACGGCCAGGCCGGGCGCAAGGACGTGGAAGCGGC GCTCGCCGCGCACCAGCTTACGCCCGTGTACGCGACCAACTTCCCTCTGGGCGTGAAGAGCCTGGCGCCCCAGTTGCAGG CCGCGCGCGATGCGGGCGCACAGGTCATCTTCAGCTACACCGTAGGGCCGGAGAACGCTGTCATTGCCCAAGGCCGCAAG GAGCTGGGCTGGAAGGTGCCGCAGGTCGGCGGCTGGACGCTGTCGTTCCCGTTCTTCATCCAGGGCGGCAAGGACGCCGC CGAGGGAGCGCTGACGGCGCAGACCTTCATCGCCGAGCCCAGCAACGAACGCCGCGCCTCGTTCCTGAGCACCTACGCGC GCGCCTTCAAGGGCCGCCCGGCCGTGCCGATGGCGGCGGCGCAAGGGTACGACGCGGCCTACCTGCTGATGTATGCGCTG CTGGGCATCCGCGACGGGCAGGTCAACGGCCCGGCCCTCAAGCATTCGCTGGAGAACCTGCAGCGCGTGTATTACGGCGT GGTGGCGACCTACGAGCGGCCCTTCTCGGCCGAGGAGAAAGAAGCCATCACCCCCAACATGCTGGTGATGGGCAAGGTGC AGGCCGGCGCGGTGACCTTCGCCTACCCCGAGGATGCCAAGCGCAACCTGCTGGTGCAGCGCAAACGCTGA
Upstream 100 bases:
>100_bases CGCCCCTGACCGCGACCGCGCACCGCTGCGCAATAAACCACATCGCGCGCCCGCGCTTTTGGTTAGGCTGGAGTGTTTTT CACAACATTGCGGAGACACG
Downstream 100 bases:
>100_bases GGTGCGAGCCGCTCAGGCCAGGCGCGGCGCCCCGTAGGCGGCAGCGGGCGTGTCGTCGCCCAGAAAGGCGAAGTCCATGG CTGGCCGCTCGCCGCTCAGC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MMAMRPRHWAGALALWALAGMAGAQPVKVGVIGPFSGPSSDFGTPMLQGIQLAVEQFNAVGGYLGRPVELVVKDDQGSPD TGRQRSQELAKEGVVAALGFCNTGVAMKSLDVFQQAKLPLIVPCATGTPVTRTYPAAQSFIFRTSAPDNIQAPFVVEDIL RRGWTRVALFADDTGYGQAGRKDVEAALAAHQLTPVYATNFPLGVKSLAPQLQAARDAGAQVIFSYTVGPENAVIAQGRK ELGWKVPQVGGWTLSFPFFIQGGKDAAEGALTAQTFIAEPSNERRASFLSTYARAFKGRPAVPMAAAQGYDAAYLLMYAL LGIRDGQVNGPALKHSLENLQRVYYGVVATYERPFSAEEKEAITPNMLVMGKVQAGAVTFAYPEDAKRNLLVQRKR
Sequences:
>Translated_396_residues MMAMRPRHWAGALALWALAGMAGAQPVKVGVIGPFSGPSSDFGTPMLQGIQLAVEQFNAVGGYLGRPVELVVKDDQGSPD TGRQRSQELAKEGVVAALGFCNTGVAMKSLDVFQQAKLPLIVPCATGTPVTRTYPAAQSFIFRTSAPDNIQAPFVVEDIL RRGWTRVALFADDTGYGQAGRKDVEAALAAHQLTPVYATNFPLGVKSLAPQLQAARDAGAQVIFSYTVGPENAVIAQGRK ELGWKVPQVGGWTLSFPFFIQGGKDAAEGALTAQTFIAEPSNERRASFLSTYARAFKGRPAVPMAAAQGYDAAYLLMYAL LGIRDGQVNGPALKHSLENLQRVYYGVVATYERPFSAEEKEAITPNMLVMGKVQAGAVTFAYPEDAKRNLLVQRKR >Mature_396_residues MMAMRPRHWAGALALWALAGMAGAQPVKVGVIGPFSGPSSDFGTPMLQGIQLAVEQFNAVGGYLGRPVELVVKDDQGSPD TGRQRSQELAKEGVVAALGFCNTGVAMKSLDVFQQAKLPLIVPCATGTPVTRTYPAAQSFIFRTSAPDNIQAPFVVEDIL RRGWTRVALFADDTGYGQAGRKDVEAALAAHQLTPVYATNFPLGVKSLAPQLQAARDAGAQVIFSYTVGPENAVIAQGRK ELGWKVPQVGGWTLSFPFFIQGGKDAAEGALTAQTFIAEPSNERRASFLSTYARAFKGRPAVPMAAAQGYDAAYLLMYAL LGIRDGQVNGPALKHSLENLQRVYYGVVATYERPFSAEEKEAITPNMLVMGKVQAGAVTFAYPEDAKRNLLVQRKR
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=301, Percent_Identity=25.5813953488372, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1789867, Length=300, Percent_Identity=26, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42456; Mature: 42456
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAMRPRHWAGALALWALAGMAGAQPVKVGVIGPFSGPSSDFGTPMLQGIQLAVEQFNAV CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH GGYLGRPVELVVKDDQGSPDTGRQRSQELAKEGVVAALGFCNTGVAMKSLDVFQQAKLPL HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHCCCCE IVPCATGTPVTRTYPAAQSFIFRTSAPDNIQAPFVVEDILRRGWTRVALFADDTGYGQAG EEEECCCCCCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCC RKDVEAALAAHQLTPVYATNFPLGVKSLAPQLQAARDAGAQVIFSYTVGPENAVIAQGRK HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHH ELGWKVPQVGGWTLSFPFFIQGGKDAAEGALTAQTFIAEPSNERRASFLSTYARAFKGRP HHCCCCCCCCCEEEECCEEEECCCCHHCCCEEHHHEECCCCCHHHHHHHHHHHHHHCCCC AVPMAAAQGYDAAYLLMYALLGIRDGQVNGPALKHSLENLQRVYYGVVATYERPFSAEEK CCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EAITPNMLVMGKVQAGAVTFAYPEDAKRNLLVQRKR HCCCCCEEEEEEECCCEEEEECCCCCCCCCEEECCC >Mature Secondary Structure MMAMRPRHWAGALALWALAGMAGAQPVKVGVIGPFSGPSSDFGTPMLQGIQLAVEQFNAV CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH GGYLGRPVELVVKDDQGSPDTGRQRSQELAKEGVVAALGFCNTGVAMKSLDVFQQAKLPL HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHCCCCE IVPCATGTPVTRTYPAAQSFIFRTSAPDNIQAPFVVEDILRRGWTRVALFADDTGYGQAG EEEECCCCCCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCC RKDVEAALAAHQLTPVYATNFPLGVKSLAPQLQAARDAGAQVIFSYTVGPENAVIAQGRK HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHH ELGWKVPQVGGWTLSFPFFIQGGKDAAEGALTAQTFIAEPSNERRASFLSTYARAFKGRP HHCCCCCCCCCEEEECCEEEECCCCHHCCCEEHHHEECCCCCHHHHHHHHHHHHHHCCCC AVPMAAAQGYDAAYLLMYALLGIRDGQVNGPALKHSLENLQRVYYGVVATYERPFSAEEK CCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EAITPNMLVMGKVQAGAVTFAYPEDAKRNLLVQRKR HCCCCCEEEEEEECCCEEEEECCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]