Click here to switch to the map view.

The map label for this gene is chaC [H]

Identifier: 222109281

GI number: 222109281

Start: 59741

End: 60484

Strand: Direct

Name: chaC [H]

Synonym: Dtpsy_0056

Alternate gene names: 222109281

Gene position: 59741-60484 (Clockwise)

Preceding gene: 222109280

Following gene: 222109282

Centisome position: 1.57

GC content: 71.91

Gene sequence:

>744_bases
ATGGAACCCCACGCCTTCAGGCACCTGCCCGAACTGCAAGGACGGCTCACGCCGCCCCAGGCCAGCGGGCTGCGCCTGAC
CGACGAGGTGCTCGCCGCCTGGGATGCACAGGCGCGCCAGCAGGGCCTGTCCGCCGACTGGCGGCTGCCCGATGACGTGG
TCGAGCGCTCACGCCAGGCCGTGCTGGCGCAGAGCGAGGGGTGCGACCTCTGGGTGTTTGCCTACGGCTCGCTGATGTGG
AACCCCGCCATCCACTTTGACGAGGTGCGCCGCGCCCGGCTCGCGGACCATGCGCGCCGCTTCGCGCTGGCCACCACGAT
CGGCCGCGGTACACCCGACAGCCCGGGCCTGGTACTCACGCTGCAGCGCGGCGTGGGTGACTGCGAGGGGTTGGCATTCC
GCATTCCCCAGGCGCTGCTGGAGCGGGAGTCGCGCATGCTGTGGCGGCGCGAAATGATCCACGGCAGCTACTGCCCGGGC
TTTCAACCGCTGCACACGCCGCAGGGCGGTGTGCGCGCGCTGGTGCTGTCCGCCAACACCGCGCACCCGCTGCACCGCGG
CGGGCTGTCGCTGGACGACACCGCGGCCATCATCGCCAGCGCGCAGGGCAGCGTGGGCAGCAACCGCGACTACCTGGACC
AGCTGGCGTGCCAACTCGACCTCTTGGGCATCCGCGATGACTACGTGCGCTGCCTGGCTGCCCGGGTGCGCGCGCACCGC
GCGGCGCCGAACCGGGGTGGTTAA

Upstream 100 bases:

>100_bases
TGCGAAATACAGTGAACCGCAGTGAAGAGCGGCGCGCCGCCGCGCCGTTCTCCAGCGTACGGACCCGCTCCTTCCCCCCG
GTTCTGCATCGACCCCACCC

Downstream 100 bases:

>100_bases
GTGAGATCGAACCAGCGCCGGTGGCGCCTGCTGGAGCGGGGTGCCTCTGTGTGCTGGCCCATGAAGGCGGCGGGGTGCTG
CGCGCGCTGCCAGCCATGCT

Product: chac family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MEPHAFRHLPELQGRLTPPQASGLRLTDEVLAAWDAQARQQGLSADWRLPDDVVERSRQAVLAQSEGCDLWVFAYGSLMW
NPAIHFDEVRRARLADHARRFALATTIGRGTPDSPGLVLTLQRGVGDCEGLAFRIPQALLERESRMLWRREMIHGSYCPG
FQPLHTPQGGVRALVLSANTAHPLHRGGLSLDDTAAIIASAQGSVGSNRDYLDQLACQLDLLGIRDDYVRCLAARVRAHR
AAPNRGG

Sequences:

>Translated_247_residues
MEPHAFRHLPELQGRLTPPQASGLRLTDEVLAAWDAQARQQGLSADWRLPDDVVERSRQAVLAQSEGCDLWVFAYGSLMW
NPAIHFDEVRRARLADHARRFALATTIGRGTPDSPGLVLTLQRGVGDCEGLAFRIPQALLERESRMLWRREMIHGSYCPG
FQPLHTPQGGVRALVLSANTAHPLHRGGLSLDDTAAIIASAQGSVGSNRDYLDQLACQLDLLGIRDDYVRCLAARVRAHR
AAPNRGG
>Mature_247_residues
MEPHAFRHLPELQGRLTPPQASGLRLTDEVLAAWDAQARQQGLSADWRLPDDVVERSRQAVLAQSEGCDLWVFAYGSLMW
NPAIHFDEVRRARLADHARRFALATTIGRGTPDSPGLVLTLQRGVGDCEGLAFRIPQALLERESRMLWRREMIHGSYCPG
FQPLHTPQGGVRALVLSANTAHPLHRGGLSLDDTAAIIASAQGSVGSNRDYLDQLACQLDLLGIRDDYVRCLAARVRAHR
AAPNRGG

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=158, Percent_Identity=30.379746835443, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI56790287, Length=154, Percent_Identity=31.1688311688312, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI145693119, Length=208, Percent_Identity=37.0192307692308, Blast_Score=121, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17560078, Length=177, Percent_Identity=31.0734463276836, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 27193; Mature: 27193

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPHAFRHLPELQGRLTPPQASGLRLTDEVLAAWDAQARQQGLSADWRLPDDVVERSRQA
CCCHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
VLAQSEGCDLWVFAYGSLMWNPAIHFDEVRRARLADHARRFALATTIGRGTPDSPGLVLT
HHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
LQRGVGDCEGLAFRIPQALLERESRMLWRREMIHGSYCPGFQPLHTPQGGVRALVLSANT
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
AHPLHRGGLSLDDTAAIIASAQGSVGSNRDYLDQLACQLDLLGIRDDYVRCLAARVRAHR
CCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AAPNRGG
CCCCCCC
>Mature Secondary Structure
MEPHAFRHLPELQGRLTPPQASGLRLTDEVLAAWDAQARQQGLSADWRLPDDVVERSRQA
CCCHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
VLAQSEGCDLWVFAYGSLMWNPAIHFDEVRRARLADHARRFALATTIGRGTPDSPGLVLT
HHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
LQRGVGDCEGLAFRIPQALLERESRMLWRREMIHGSYCPGFQPLHTPQGGVRALVLSANT
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
AHPLHRGGLSLDDTAAIIASAQGSVGSNRDYLDQLACQLDLLGIRDDYVRCLAARVRAHR
CCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AAPNRGG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]