| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is sopA [C]
Identifier: 222109273
GI number: 222109273
Start: 51741
End: 52511
Strand: Direct
Name: sopA [C]
Synonym: Dtpsy_0048
Alternate gene names: 222109273
Gene position: 51741-52511 (Clockwise)
Preceding gene: 222109272
Following gene: 222109274
Centisome position: 1.36
GC content: 66.67
Gene sequence:
>771_bases ATGGCCAAGATCTTCTGCATTGCCAACCAAAAGGGTGGGGTCGGCAAGACCACCACTTCCGTCAATCTGGCCGCGGGCCT GGCCAAGATCGGCCAGCGCGTGCTGCTCGTGGACCTGGACCCGCAGGGCAATGCCACCATGGGCTCGGGCGTGGACAAGC GCGCGCTGGAGCTGTCGGTGTACGACGTGCTGCTGGAGTCGGCCTCGGTGCCGGAGGCCGCCGTGCTGTCGGAGCAGTGC GGCTACCGCGTGCTGGGCGCCAACCGCGAACTCGCCGGGGCAGAGGTGGAACTGGTGCCGCTGGAGCAGCGCGAACGCCG CCTGAAAGCCGCCCTGGCGGCGGTGGACTCCGACTACGATTTCGTGCTCATCGACTGCCCGCCCTCCCTGTCCATGCTCA CCCTGAACGGCCTGTGCAGCGCCCACGGCGTCATCGTGCCGATGCAGTGCGAGTACTTCGCGCTGGAGGGCCTGACCGAT CTGGTGAACACCATCAAGCAGGTGCATGCCAACCTGAACCCCGACCTGCAGATCATCGGCCTGCTGCGCGTGATGTTCGA CCCGCGCATCACGCTGCAAAGCCAGGTGAGCGAGCAGCTCAAGGACCACTTCGGCGACAAGGTGTTCGACACCGTGATCC CGCGCAACGTGCGCCTGGCCGAGGCGCCCAGCTACGGTTTGCCCGGCGTGGTGTTCGATCCCGCGGCCAAGGGCAGCCAG GCTTTCGTGGAGTTCGCGCGCGAGATGGTGGAGCGCGTGAAGCGCATGTGA
Upstream 100 bases:
>100_bases AACCCCACGGTGGCGCGCGTGTTGGAGAAAACGGCGGGCGTGTTCCTCATCGGCTTCGGCGTCAAGCTGGCCATTTCCAA GTAATCGCGAATTGCCCCGC
Downstream 100 bases:
>100_bases TGCCTGGCCAAGGTCTTACCGGTCAAAATAGCCTCCAAGGCTTATTGGATAAGCGCTATAAGCTATATAAATAATAGTAA CGCCGCATGAACCCCTCGCA
Product: cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAKIFCIANQKGGVGKTTTSVNLAAGLAKIGQRVLLVDLDPQGNATMGSGVDKRALELSVYDVLLESASVPEAAVLSEQC GYRVLGANRELAGAEVELVPLEQRERRLKAALAAVDSDYDFVLIDCPPSLSMLTLNGLCSAHGVIVPMQCEYFALEGLTD LVNTIKQVHANLNPDLQIIGLLRVMFDPRITLQSQVSEQLKDHFGDKVFDTVIPRNVRLAEAPSYGLPGVVFDPAAKGSQ AFVEFAREMVERVKRM
Sequences:
>Translated_256_residues MAKIFCIANQKGGVGKTTTSVNLAAGLAKIGQRVLLVDLDPQGNATMGSGVDKRALELSVYDVLLESASVPEAAVLSEQC GYRVLGANRELAGAEVELVPLEQRERRLKAALAAVDSDYDFVLIDCPPSLSMLTLNGLCSAHGVIVPMQCEYFALEGLTD LVNTIKQVHANLNPDLQIIGLLRVMFDPRITLQSQVSEQLKDHFGDKVFDTVIPRNVRLAEAPSYGLPGVVFDPAAKGSQ AFVEFAREMVERVKRM >Mature_255_residues AKIFCIANQKGGVGKTTTSVNLAAGLAKIGQRVLLVDLDPQGNATMGSGVDKRALELSVYDVLLESASVPEAAVLSEQCG YRVLGANRELAGAEVELVPLEQRERRLKAALAAVDSDYDFVLIDCPPSLSMLTLNGLCSAHGVIVPMQCEYFALEGLTDL VNTIKQVHANLNPDLQIIGLLRVMFDPRITLQSQVSEQLKDHFGDKVFDTVIPRNVRLAEAPSYGLPGVVFDPAAKGSQA FVEFAREMVERVKRM
Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis soj [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27712; Mature: 27581
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIFCIANQKGGVGKTTTSVNLAAGLAKIGQRVLLVDLDPQGNATMGSGVDKRALELSV CCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHH YDVLLESASVPEAAVLSEQCGYRVLGANRELAGAEVELVPLEQRERRLKAALAAVDSDYD HHHHHHCCCCCHHHHHHHHCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCC FVLIDCPPSLSMLTLNGLCSAHGVIVPMQCEYFALEGLTDLVNTIKQVHANLNPDLQIIG EEEEECCCCCCEEEECCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLRVMFDPRITLQSQVSEQLKDHFGDKVFDTVIPRNVRLAEAPSYGLPGVVFDPAAKGSQ HHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCCEEECCCCCCHH AFVEFAREMVERVKRM HHHHHHHHHHHHHHCC >Mature Secondary Structure AKIFCIANQKGGVGKTTTSVNLAAGLAKIGQRVLLVDLDPQGNATMGSGVDKRALELSV CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHH YDVLLESASVPEAAVLSEQCGYRVLGANRELAGAEVELVPLEQRERRLKAALAAVDSDYD HHHHHHCCCCCHHHHHHHHCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCC FVLIDCPPSLSMLTLNGLCSAHGVIVPMQCEYFALEGLTDLVNTIKQVHANLNPDLQIIG EEEEECCCCCCEEEECCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLRVMFDPRITLQSQVSEQLKDHFGDKVFDTVIPRNVRLAEAPSYGLPGVVFDPAAKGSQ HHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCCEEECCCCCCHH AFVEFAREMVERVKRM HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]