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The map label for this gene is 222102868

Identifier: 222102868

GI number: 222102868

Start: 545420

End: 546460

Strand: Reverse

Name: 222102868

Synonym: Avi_7603

Alternate gene names: NA

Gene position: 546460-545420 (Counterclockwise)

Preceding gene: 222102869

Following gene: 222102867

Centisome position: 86.5

GC content: 59.27

Gene sequence:

>1041_bases
ATGCAAAACTTCAACATCACAAGACGTCATTTCGGACTGCTTGCCGCCGGTGCGGCTGCGGCCGCCACGCTGCCCTTCGC
TGCCCGCGCCGCTGGTGGTACGGCTGTTGCGGCGACCTTCCCCGGAAACTGGGAGGATGGCTACCGCTTCGTGCTGACGC
CGCTCGTCAAGGAAGCCGGTTTCGACCTGACAGTCGCTCCCGCCTTGGCGCAGGACCAGCTTGCCAAGGTGATGGCAAGC
CCCGGCAACCCGCCTTACGATACCCTGCTGATGTCGCCCGGTCAGATGGCCGTCGCCATTGAGAACGACCTCATTCAGAA
GATCGATCCGTCCAAGCTCAAGAACTGGAGCATGCTCGATCCGGCATTCCAGGGCGAGTACGGACCGACCGTGACGGTCG
AAGTCAATGGTATCGCTTATAATCCTGATCTGGTGCCGGCTCCGAAAGGCTATCGCGACCTGTTCGAAAACCCGGCTTAT
AAAGGCCTGGTATCCTGGACCGGTTTCGCCTCCAACACCGGCGTGATGGCCTATACCGAAATCGCCAGGATTTTTGGGAA
CGGTCCGACCGACATGGACGCCGTGTTCAAACTGTTCAAGGACAATCCCGAGCAGATCAAGGGCGTCGTCGCCAGCACAA
ACCATCAGATGACCTTGTTCCAGCAGGGCGAAATCGCTGTCTTCATGTGCTCGACCGGCAATGTTGCGCGCCTCAAGTCC
ATGGGCCTCAAAGCCGAGTTCGTCCAGCCGGAAACTGGCTCTCCGGCGGCTCCCGTCAACATCCATCTGACCAAGGGCGC
GAAGAACATTGACGCAGCCTATACCTATATGGACGCCGCCATCTCAAAGGCCGCGCAGGACAAGCTGAAACTGCCACCAA
CCGAGATGTTCCCGACCAATAAGGAGGTCGCTCTTACACCCGGCATTGAGGCCTATGTGAAACGCGAACAGCTGGCCACA
CTGGTCTACCCCGACTGGGCGGCGATCAACAAGAACCGTGCGGAATGGATCCGCCAGTTCGATGCTCTCGTCGCCGGTTG
A

Upstream 100 bases:

>100_bases
CGGGAGCCCAACTCTTTGCCGAGATCGACACCGCCAGGTGTCACGCCTTTCCGAGCGAACCGGAAGCATCCAGTCAATGA
ACAACAACAGAGGTGAACAG

Downstream 100 bases:

>100_bases
GGGTTTACAATGAAAGCGAGCGGTTTCCCATACGTTGTCCCGATGCTTCTGCTGTCGGTGGCGTTCTTTGCGACGCCGCT
CGCCGTTCTCGTCGGATTCA

Product: ABC transporter substrate binding protein

Products: NA

Alternate protein names: ABC Transporter

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MQNFNITRRHFGLLAAGAAAAATLPFAARAAGGTAVAATFPGNWEDGYRFVLTPLVKEAGFDLTVAPALAQDQLAKVMAS
PGNPPYDTLLMSPGQMAVAIENDLIQKIDPSKLKNWSMLDPAFQGEYGPTVTVEVNGIAYNPDLVPAPKGYRDLFENPAY
KGLVSWTGFASNTGVMAYTEIARIFGNGPTDMDAVFKLFKDNPEQIKGVVASTNHQMTLFQQGEIAVFMCSTGNVARLKS
MGLKAEFVQPETGSPAAPVNIHLTKGAKNIDAAYTYMDAAISKAAQDKLKLPPTEMFPTNKEVALTPGIEAYVKREQLAT
LVYPDWAAINKNRAEWIRQFDALVAG

Sequences:

>Translated_346_residues
MQNFNITRRHFGLLAAGAAAAATLPFAARAAGGTAVAATFPGNWEDGYRFVLTPLVKEAGFDLTVAPALAQDQLAKVMAS
PGNPPYDTLLMSPGQMAVAIENDLIQKIDPSKLKNWSMLDPAFQGEYGPTVTVEVNGIAYNPDLVPAPKGYRDLFENPAY
KGLVSWTGFASNTGVMAYTEIARIFGNGPTDMDAVFKLFKDNPEQIKGVVASTNHQMTLFQQGEIAVFMCSTGNVARLKS
MGLKAEFVQPETGSPAAPVNIHLTKGAKNIDAAYTYMDAAISKAAQDKLKLPPTEMFPTNKEVALTPGIEAYVKREQLAT
LVYPDWAAINKNRAEWIRQFDALVAG
>Mature_346_residues
MQNFNITRRHFGLLAAGAAAAATLPFAARAAGGTAVAATFPGNWEDGYRFVLTPLVKEAGFDLTVAPALAQDQLAKVMAS
PGNPPYDTLLMSPGQMAVAIENDLIQKIDPSKLKNWSMLDPAFQGEYGPTVTVEVNGIAYNPDLVPAPKGYRDLFENPAY
KGLVSWTGFASNTGVMAYTEIARIFGNGPTDMDAVFKLFKDNPEQIKGVVASTNHQMTLFQQGEIAVFMCSTGNVARLKS
MGLKAEFVQPETGSPAAPVNIHLTKGAKNIDAAYTYMDAAISKAAQDKLKLPPTEMFPTNKEVALTPGIEAYVKREQLAT
LVYPDWAAINKNRAEWIRQFDALVAG

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37297; Mature: 37297

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFNITRRHFGLLAAGAAAAATLPFAARAAGGTAVAATFPGNWEDGYRFVLTPLVKEAG
CCCCCCCHHHHHHHHHCHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHCC
FDLTVAPALAQDQLAKVMASPGNPPYDTLLMSPGQMAVAIENDLIQKIDPSKLKNWSMLD
CCEEECCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECHHHHHHCCHHHCCCCCCCC
PAFQGEYGPTVTVEVNGIAYNPDLVPAPKGYRDLFENPAYKGLVSWTGFASNTGVMAYTE
HHHCCCCCCEEEEEECCEEECCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCEEHHHH
IARIFGNGPTDMDAVFKLFKDNPEQIKGVVASTNHQMTLFQQGEIAVFMCSTGNVARLKS
HHHHHCCCCCCHHHHHHHHCCCHHHHHEEEECCCCEEEEEECCCEEEEEECCCCHHHHHH
MGLKAEFVQPETGSPAAPVNIHLTKGAKNIDAAYTYMDAAISKAAQDKLKLPPTEMFPTN
CCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC
KEVALTPGIEAYVKREQLATLVYPDWAAINKNRAEWIRQFDALVAG
CCEEECCCHHHHHHHHHHHEEECCCHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQNFNITRRHFGLLAAGAAAAATLPFAARAAGGTAVAATFPGNWEDGYRFVLTPLVKEAG
CCCCCCCHHHHHHHHHCHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHCC
FDLTVAPALAQDQLAKVMASPGNPPYDTLLMSPGQMAVAIENDLIQKIDPSKLKNWSMLD
CCEEECCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECHHHHHHCCHHHCCCCCCCC
PAFQGEYGPTVTVEVNGIAYNPDLVPAPKGYRDLFENPAYKGLVSWTGFASNTGVMAYTE
HHHCCCCCCEEEEEECCEEECCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCEEHHHH
IARIFGNGPTDMDAVFKLFKDNPEQIKGVVASTNHQMTLFQQGEIAVFMCSTGNVARLKS
HHHHHCCCCCCHHHHHHHHCCCHHHHHEEEECCCCEEEEEECCCEEEEEECCCCHHHHHH
MGLKAEFVQPETGSPAAPVNIHLTKGAKNIDAAYTYMDAAISKAAQDKLKLPPTEMFPTN
CCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC
KEVALTPGIEAYVKREQLATLVYPDWAAINKNRAEWIRQFDALVAG
CCEEECCCHHHHHHHHHHHEEECCCHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA