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The map label for this gene is potC [H]

Identifier: 222102866

GI number: 222102866

Start: 543769

End: 544590

Strand: Reverse

Name: potC [H]

Synonym: Avi_7601

Alternate gene names: 222102866

Gene position: 544590-543769 (Counterclockwise)

Preceding gene: 222102867

Following gene: 222102865

Centisome position: 86.2

GC content: 60.95

Gene sequence:

>822_bases
ATGCATAATCATCGCGAAAATCCGATCCCGACCCTTCTCTACAAGGCATTTGTTTTCGGCTTCGGCAGTCTCAGCCTGAT
CTATCTGGTGGCGCCGATTATCATTGTGATCACCATGTCCTTCACCTCGGGCCAGACGCTCAAATATCCGCCAGAGGGTT
TTTCTCTGCGCTGGTATGAGGCGCTGATCGATCCCGTCCGCTCAGGAACCGAACACATAGCGGCTGGCAATTCGCTGAAG
ATCGCCGGCCTCGCGGTGCTCGGATCGCTGCTGTTTGCCGTGCCTGCCACCATTGGCATGGCACGGATGCGACGCAGTAC
GGTCAATGCGCTGGAGCCGTTTCTGTTGGCCCCGCTCGTCCTGCCAAGCCTGGTGTATGGTCTGGCGGCGCTGATCGTGG
CGAATTTCGTCGGCTTCCAGCCTTCGCTCTGGCTCACCGTCGTCGGCCATGTCGTCGTCTTCGGGCCACTGATGTACCGC
GCCGCTTCCGTTGTCGCGCAAGGGATCAATCCGTCGCTGGCCGAGGCCTCTGCCGTGATGGGTGCAACCTGGCACACGAC
GCTCCGGCGCGTGATCCTGCCGCTGCTGACACCAGGCATTCTGGCCGGCGCCTTCCTCGTCTTCATCCAGTCCCTCGACA
ACGTCTCTGTGTCGCTTTTCCTGGCCGACGCGCAAACGACCGTGCTGCCGCTTCGCATGTTTGCATTGATCGAGGAGTCG
CTCGATGTCCGGGTGGCCGCAATGTCAGGAATCCTGATCGGGCTGACCCTGGTGGTGATGCTGGTTGCGAGGCGGGTGCT
GGCACCATCCCGTCAAGCCTGA

Upstream 100 bases:

>100_bases
TGGCCGATGGCCTCTGCCATCGCCGTTGTCCTCCTTCTGTCAACCGGCATCCTTCTCGTCGTCATGACCATGATTTCACG
TCACAGGAGGCTTGTCGGCC

Downstream 100 bases:

>100_bases
CCCAAAATACATCTGGAAGGAATACCCAATGACCATACATGCCAACACGTCAGGCACCTATCGCATCGGATCACTGCTTG
CCGATTTCCAGCCGGATTTC

Product: ABC transporter membrane spanning protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHNHRENPIPTLLYKAFVFGFGSLSLIYLVAPIIIVITMSFTSGQTLKYPPEGFSLRWYEALIDPVRSGTEHIAAGNSLK
IAGLAVLGSLLFAVPATIGMARMRRSTVNALEPFLLAPLVLPSLVYGLAALIVANFVGFQPSLWLTVVGHVVVFGPLMYR
AASVVAQGINPSLAEASAVMGATWHTTLRRVILPLLTPGILAGAFLVFIQSLDNVSVSLFLADAQTTVLPLRMFALIEES
LDVRVAAMSGILIGLTLVVMLVARRVLAPSRQA

Sequences:

>Translated_273_residues
MHNHRENPIPTLLYKAFVFGFGSLSLIYLVAPIIIVITMSFTSGQTLKYPPEGFSLRWYEALIDPVRSGTEHIAAGNSLK
IAGLAVLGSLLFAVPATIGMARMRRSTVNALEPFLLAPLVLPSLVYGLAALIVANFVGFQPSLWLTVVGHVVVFGPLMYR
AASVVAQGINPSLAEASAVMGATWHTTLRRVILPLLTPGILAGAFLVFIQSLDNVSVSLFLADAQTTVLPLRMFALIEES
LDVRVAAMSGILIGLTLVVMLVARRVLAPSRQA
>Mature_273_residues
MHNHRENPIPTLLYKAFVFGFGSLSLIYLVAPIIIVITMSFTSGQTLKYPPEGFSLRWYEALIDPVRSGTEHIAAGNSLK
IAGLAVLGSLLFAVPATIGMARMRRSTVNALEPFLLAPLVLPSLVYGLAALIVANFVGFQPSLWLTVVGHVVVFGPLMYR
AASVVAQGINPSLAEASAVMGATWHTTLRRVILPLLTPGILAGAFLVFIQSLDNVSVSLFLADAQTTVLPLRMFALIEES
LDVRVAAMSGILIGLTLVVMLVARRVLAPSRQA

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=220, Percent_Identity=26.3636363636364, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787714, Length=229, Percent_Identity=31.8777292576419, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787081, Length=259, Percent_Identity=25.4826254826255, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29259; Mature: 29259

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHNHRENPIPTLLYKAFVFGFGSLSLIYLVAPIIIVITMSFTSGQTLKYPPEGFSLRWYE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHH
ALIDPVRSGTEHIAAGNSLKIAGLAVLGSLLFAVPATIGMARMRRSTVNALEPFLLAPLV
HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSLVYGLAALIVANFVGFQPSLWLTVVGHVVVFGPLMYRAASVVAQGINPSLAEASAVM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GATWHTTLRRVILPLLTPGILAGAFLVFIQSLDNVSVSLFLADAQTTVLPLRMFALIEES
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH
LDVRVAAMSGILIGLTLVVMLVARRVLAPSRQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]