| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is prxC [C]
Identifier: 222102863
GI number: 222102863
Start: 540758
End: 541576
Strand: Direct
Name: prxC [C]
Synonym: Avi_7597
Alternate gene names: 222102863
Gene position: 540758-541576 (Clockwise)
Preceding gene: 222102862
Following gene: 222102870
Centisome position: 85.59
GC content: 54.95
Gene sequence:
>819_bases ATGGCTTTTATCGAAGCGAAAGATGGTACGCAATTGCATGTAAAGGACATGGGAAAAGGTCGTCCCGTGGTGCTTATCCA TGGATGGCCTTTGACCGGCGATATGTTTGAATATCAGTCACTTGCTCTGCTGGAAGCGGGCTTTCGCGTCATCACTTACG ACCGTCGGGGCTTTGGTCAGTCGGGGCATCCAGCCGATGGCTACAATTACGACACGTTTGCCGATGACCTCGCCAGCGTG ATCGATAGCCTGGATGTTCAGAATGTGTCGCTTGTCGGCTTTTCCATGGGTGGGGGCGAGATCGCCCGCTACCTGTCGCG ACATGGGGCCTCGAAGGTCTCCAAGGCGGTGCTGGTTGCCTCTGTGGCGCCGTATCTTCTCAAGGATGCAAGCAATCCTG ATGGTGTCGACGCCAGCGTATTTGAGGGTATGAAGAATGACATCCGCAAAGACCGGTTTGCGTTTCTTCAGAGCTTTGCC AAGACCTTTTACGGCGTCGGCCTGGTTACCAGTCCGGTGAGCCAGGGCGTATTGGATTGGTCATTCATTCTCGGCGTTAT GGCCAGCCCCAAAGCGACAATTGATTGTGTCGATGCATTTGGTAAGACCGATTTCAGGCCGGATCTTGCCGCGTTCACCA TCCCCACACTGGTCATCCATGGCACGGCAGACAAAACCGTGCCGATTGACCCCGCAGGTCGAGCAGCGGCCAATGGTATC GCAGGTGCCAAACTGATCGAATACGAAGGTGAGCCTCACGGCCTGTTTGCCACGGCTCCAGACCGCCTCAATCGAGATCT GATCGAGTTCCTTGGATAA
Upstream 100 bases:
>100_bases GCGAACGAAAAACCGCTTCACAGTTTTCCTGGAAATGCTCTTGAGATGGAACAGGAACCTCCTCCTGGCGTTTGCCTGCC ATCATCAAAGGAGATTCAGT
Downstream 100 bases:
>100_bases TTCGTTTTCGGTGCGCCTTGTGAAACCATGAGGCGCACCAAATCCTCGTCCCCCACAGAGGGCCTTCTGTGCCGCTTATT CTGTCGTCAGCTTCTCGCCA
Product: non-heme chloroperoxidase
Products: NA
Alternate protein names: Aryl-ester hydrolase; PFE; Putative bromoperoxidase [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MAFIEAKDGTQLHVKDMGKGRPVVLIHGWPLTGDMFEYQSLALLEAGFRVITYDRRGFGQSGHPADGYNYDTFADDLASV IDSLDVQNVSLVGFSMGGGEIARYLSRHGASKVSKAVLVASVAPYLLKDASNPDGVDASVFEGMKNDIRKDRFAFLQSFA KTFYGVGLVTSPVSQGVLDWSFILGVMASPKATIDCVDAFGKTDFRPDLAAFTIPTLVIHGTADKTVPIDPAGRAAANGI AGAKLIEYEGEPHGLFATAPDRLNRDLIEFLG
Sequences:
>Translated_272_residues MAFIEAKDGTQLHVKDMGKGRPVVLIHGWPLTGDMFEYQSLALLEAGFRVITYDRRGFGQSGHPADGYNYDTFADDLASV IDSLDVQNVSLVGFSMGGGEIARYLSRHGASKVSKAVLVASVAPYLLKDASNPDGVDASVFEGMKNDIRKDRFAFLQSFA KTFYGVGLVTSPVSQGVLDWSFILGVMASPKATIDCVDAFGKTDFRPDLAAFTIPTLVIHGTADKTVPIDPAGRAAANGI AGAKLIEYEGEPHGLFATAPDRLNRDLIEFLG >Mature_271_residues AFIEAKDGTQLHVKDMGKGRPVVLIHGWPLTGDMFEYQSLALLEAGFRVITYDRRGFGQSGHPADGYNYDTFADDLASVI DSLDVQNVSLVGFSMGGGEIARYLSRHGASKVSKAVLVASVAPYLLKDASNPDGVDASVFEGMKNDIRKDRFAFLQSFAK TFYGVGLVTSPVSQGVLDWSFILGVMASPKATIDCVDAFGKTDFRPDLAAFTIPTLVIHGTADKTVPIDPAGRAAANGIA GAKLIEYEGEPHGLFATAPDRLNRDLIEFLG
Specific function: Bifunctional enzyme, capable of both ester hydrolysis and halogenation. Has a low bromoperoxidase activity. Acts on many phenolic esters [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.2 [H]
Molecular weight: Translated: 29154; Mature: 29023
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIEAKDGTQLHVKDMGKGRPVVLIHGWPLTGDMFEYQSLALLEAGFRVITYDRRGFGQ CCEEECCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC SGHPADGYNYDTFADDLASVIDSLDVQNVSLVGFSMGGGEIARYLSRHGASKVSKAVLVA CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHH SVAPYLLKDASNPDGVDASVFEGMKNDIRKDRFAFLQSFAKTFYGVGLVTSPVSQGVLDW HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH SFILGVMASPKATIDCVDAFGKTDFRPDLAAFTIPTLVIHGTADKTVPIDPAGRAAANGI HHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCHHHCCC AGAKLIEYEGEPHGLFATAPDRLNRDLIEFLG CCCEEEEECCCCCCEEECCHHHHCHHHHHHCC >Mature Secondary Structure AFIEAKDGTQLHVKDMGKGRPVVLIHGWPLTGDMFEYQSLALLEAGFRVITYDRRGFGQ CEEECCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC SGHPADGYNYDTFADDLASVIDSLDVQNVSLVGFSMGGGEIARYLSRHGASKVSKAVLVA CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHH SVAPYLLKDASNPDGVDASVFEGMKNDIRKDRFAFLQSFAKTFYGVGLVTSPVSQGVLDW HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH SFILGVMASPKATIDCVDAFGKTDFRPDLAAFTIPTLVIHGTADKTVPIDPAGRAAANGI HHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCHHHCCC AGAKLIEYEGEPHGLFATAPDRLNRDLIEFLG CCCEEEEECCCCCCEEECCHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1368608; 7704276 [H]