Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102853

Identifier: 222102853

GI number: 222102853

Start: 529444

End: 530520

Strand: Direct

Name: 222102853

Synonym: Avi_7585

Alternate gene names: NA

Gene position: 529444-530520 (Clockwise)

Preceding gene: 222102852

Following gene: 222102854

Centisome position: 83.8

GC content: 57.66

Gene sequence:

>1077_bases
ATGACAGCAGCCACGCCTGTCCGTTATTCCCCCGATCTCGAAACAGTCAAACCGGGAGAACAGGAGACTGTCTCTGCTCT
TATCAAGCAGTTCGACATCATCCTCGAAAAGACCGCCGGAGACTACGGCCATGCGGTGCGCTCCGTGCATGCCAAGGCAC
ATGGAATTCTCGAAGCAACGATGATCGTCAGAGATGGTTTGCCAGCCGAACTCGCTCAGGGCCTGTTCGCCAAAGCCGGT
GAATATCCGGTCTATATGCGTCTCTCCACAAACGCCGGTGACATCCTGCCCGACGCTATCGCTCTTCCGCGTGGTTTGGC
CATCAAGGTCGTTGGTGTCGAGGGGCCGCGTTTGCCGGACGCAAACGGCGATACGCAGGACTTCGTGATGGTGAATGGCC
CGGTCTTCCAGGCACCCAATCCCGAGAAGTTTCTCTCCAGCCTCAAGCTTCTTGCGCGGACGACGGACAAAATGGAAGGT
ACCAAGGCTGTGTTGTCGAGCGTGCTTCAAACCGTCAACAAAGGCCTCGAGGCCGTCGGCATTTCCAGCTCGACCATTCA
GTCACTCGGCGGCGCACCGAATGTCGATCCGCTTGGCGAGACATATTTCAGCGTTACCCCGTTCCGCTACGGTGACTACA
TCGCCAAGTTCCGGCTGAAACCAGTCTCACCCGATTTGACGAAGCGGACCGGAACGGAAATCGATGTCAGCGTTCGTGGG
GACGCAATCCGCGAGACCGTCCAGGCGGAAATGCAGGATACTCATGGGGAATGGGAATTCCAGGTGCAACTCTGTCGTGA
CGTTGATGCGCAGCCTATCGAAGACCCGACCGTGGAGTGGAAGGAAGATGAAGCGCCGTTCGTCAGCGTCGCCACTGTAA
CCTCCATGCCCCAGGACAGTTGGAGCTATACGAAGGTTCAGAAGGTCGATCAACAGATGCGGTTTAGCGTCTGGACCGGC
CTCGCGGACCATCAGCCGCTCGGCGGCATCAACCGCGTCCGCAAGGACACATATCAGCACTCGGCAGAGTTCAGGGCAAA
GTTCAATGGGTGTCCGTTCCATGAGCCACGCCAGTAG

Upstream 100 bases:

>100_bases
TTTCAGAGGCGAATGATCACGTTGACTGAAACTTCCAGGTCCAGGATTGCTGGAACCATCCCCCATCCGTGGCGTTCTTT
GGTTTTTAAAGGAGCGACAT

Downstream 100 bases:

>100_bases
CCAGCTATCGATGCCGAACCATTTGGAGGCATGGCTGTTTTAAAGCCGCCTTTTTTCCTCTTTAACCTCCCATCAAAAGA
AAGGCCCGCCATGGCCGACC

Product: Catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTAATPVRYSPDLETVKPGEQETVSALIKQFDIILEKTAGDYGHAVRSVHAKAHGILEATMIVRDGLPAELAQGLFAKAG
EYPVYMRLSTNAGDILPDAIALPRGLAIKVVGVEGPRLPDANGDTQDFVMVNGPVFQAPNPEKFLSSLKLLARTTDKMEG
TKAVLSSVLQTVNKGLEAVGISSSTIQSLGGAPNVDPLGETYFSVTPFRYGDYIAKFRLKPVSPDLTKRTGTEIDVSVRG
DAIRETVQAEMQDTHGEWEFQVQLCRDVDAQPIEDPTVEWKEDEAPFVSVATVTSMPQDSWSYTKVQKVDQQMRFSVWTG
LADHQPLGGINRVRKDTYQHSAEFRAKFNGCPFHEPRQ

Sequences:

>Translated_358_residues
MTAATPVRYSPDLETVKPGEQETVSALIKQFDIILEKTAGDYGHAVRSVHAKAHGILEATMIVRDGLPAELAQGLFAKAG
EYPVYMRLSTNAGDILPDAIALPRGLAIKVVGVEGPRLPDANGDTQDFVMVNGPVFQAPNPEKFLSSLKLLARTTDKMEG
TKAVLSSVLQTVNKGLEAVGISSSTIQSLGGAPNVDPLGETYFSVTPFRYGDYIAKFRLKPVSPDLTKRTGTEIDVSVRG
DAIRETVQAEMQDTHGEWEFQVQLCRDVDAQPIEDPTVEWKEDEAPFVSVATVTSMPQDSWSYTKVQKVDQQMRFSVWTG
LADHQPLGGINRVRKDTYQHSAEFRAKFNGCPFHEPRQ
>Mature_357_residues
TAATPVRYSPDLETVKPGEQETVSALIKQFDIILEKTAGDYGHAVRSVHAKAHGILEATMIVRDGLPAELAQGLFAKAGE
YPVYMRLSTNAGDILPDAIALPRGLAIKVVGVEGPRLPDANGDTQDFVMVNGPVFQAPNPEKFLSSLKLLARTTDKMEGT
KAVLSSVLQTVNKGLEAVGISSSTIQSLGGAPNVDPLGETYFSVTPFRYGDYIAKFRLKPVSPDLTKRTGTEIDVSVRGD
AIRETVQAEMQDTHGEWEFQVQLCRDVDAQPIEDPTVEWKEDEAPFVSVATVTSMPQDSWSYTKVQKVDQQMRFSVWTGL
ADHQPLGGINRVRKDTYQHSAEFRAKFNGCPFHEPRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020835
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase [H]

EC number: NA

Molecular weight: Translated: 39277; Mature: 39146

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAATPVRYSPDLETVKPGEQETVSALIKQFDIILEKTAGDYGHAVRSVHAKAHGILEAT
CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MIVRDGLPAELAQGLFAKAGEYPVYMRLSTNAGDILPDAIALPRGLAIKVVGVEGPRLPD
HHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEECCCCCCCC
ANGDTQDFVMVNGPVFQAPNPEKFLSSLKLLARTTDKMEGTKAVLSSVLQTVNKGLEAVG
CCCCCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEC
ISSSTIQSLGGAPNVDPLGETYFSVTPFRYGDYIAKFRLKPVSPDLTKRTGTEIDVSVRG
CCHHHHHHCCCCCCCCCCCCCCEEECCCHHHCCEEEEEECCCCCCHHHCCCCEEEEEECC
DAIRETVQAEMQDTHGEWEFQVQLCRDVDAQPIEDPTVEWKEDEAPFVSVATVTSMPQDS
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
WSYTKVQKVDQQMRFSVWTGLADHQPLGGINRVRKDTYQHSAEFRAKFNGCPFHEPRQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TAATPVRYSPDLETVKPGEQETVSALIKQFDIILEKTAGDYGHAVRSVHAKAHGILEAT
CCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MIVRDGLPAELAQGLFAKAGEYPVYMRLSTNAGDILPDAIALPRGLAIKVVGVEGPRLPD
HHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEECCCCCCCC
ANGDTQDFVMVNGPVFQAPNPEKFLSSLKLLARTTDKMEGTKAVLSSVLQTVNKGLEAVG
CCCCCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEC
ISSSTIQSLGGAPNVDPLGETYFSVTPFRYGDYIAKFRLKPVSPDLTKRTGTEIDVSVRG
CCHHHHHHCCCCCCCCCCCCCCEEECCCHHHCCEEEEEECCCCCCHHHCCCCEEEEEECC
DAIRETVQAEMQDTHGEWEFQVQLCRDVDAQPIEDPTVEWKEDEAPFVSVATVTSMPQDS
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
WSYTKVQKVDQQMRFSVWTGLADHQPLGGINRVRKDTYQHSAEFRAKFNGCPFHEPRQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]