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The map label for this gene is sgcQ [C]

Identifier: 222102779

GI number: 222102779

Start: 438409

End: 439251

Strand: Direct

Name: sgcQ [C]

Synonym: Avi_7481

Alternate gene names: 222102779

Gene position: 438409-439251 (Clockwise)

Preceding gene: 222102777

Following gene: 222102780

Centisome position: 69.39

GC content: 57.18

Gene sequence:

>843_bases
ATGCTGGATATATCCGACAACACATCAAGCACTATGCGAGAAATTTTCGGGCGCGACAAGGCGCTGATCGGCATGATCCA
TTGCCCGGCATTTCCCGGTGCGCCGCGCTATCGCGGCGCGAGCATGACAGAGATTTACGATGCCTGCATGCTTGATGCCG
AAGCCCTGATCGAAGGCGGCATGCATGGACTGATCATTGAAAACCACGGCGACATTCCCTTTTCCAAACCGGATGACATT
GGGCCGGAAACATCTGCTTTCATGAGCGTTGTCACTGACCGCATTTGCCGTGCGGTTGGCGTGCCACTGGGCATCAATGT
CCTGGCCAATGCACCCATTCCGGCCTTTGCCATTGCCATGGCGGGCGGGGCAAAATTCGTGCGGGTCAACCAATGGGCCA
ATGCCTATGTCGCCAATGAAGGCTTCATGGAGGGACGGGCGGCGGAGGCCATGCGCTACCGTTCCATGCTGCGGGCCGAA
CATATCAAGGTGTTTGCCGATAGCCATGTCAAGCACGGCGCCCACGCCATCACCGCCGACCGCACCATTCAGGAATTGAC
CCGCGATCTCGCCTTTTTCGATGCCGACGCGGTGATTGCCACCGGCCAGCGCACCGGCAATTCCGCGACCATGGAGGAGA
TTGAAGAGATTGGAGCGGCGACACATCTGCCCCTTTTGGTTGGTTCGGGTGTTTCCAAGGACAATATCGTCGAGATCCTG
AAACGCACCAACGGCGTTATCGTCGCTTCATCACTCAAACATGGCGATGTCTGGTGGAATCCGGTCGATATCGAACGGGT
CAAAGCTTTCGTGGCGACGGCCCAGCCCGGTTTGAAAGCATAA

Upstream 100 bases:

>100_bases
CGGTACGGACATGATTTCATCGATTGCGACATTACCGATTACCCAGGCACGCATCACAGACTTTCAACACGCATGGCAGG
CTTTCAAAAGGAAATGAGAA

Downstream 100 bases:

>100_bases
ATGCCATGGCACAGGCGGGTAAAGGACTGTTAGAGGTCAATGGCGAGCGGCTTTTGGCCCGATTGGACCAATTTGCCGCG
ATTGGCGCAACGCCCAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLDISDNTSSTMREIFGRDKALIGMIHCPAFPGAPRYRGASMTEIYDACMLDAEALIEGGMHGLIIENHGDIPFSKPDDI
GPETSAFMSVVTDRICRAVGVPLGINVLANAPIPAFAIAMAGGAKFVRVNQWANAYVANEGFMEGRAAEAMRYRSMLRAE
HIKVFADSHVKHGAHAITADRTIQELTRDLAFFDADAVIATGQRTGNSATMEEIEEIGAATHLPLLVGSGVSKDNIVEIL
KRTNGVIVASSLKHGDVWWNPVDIERVKAFVATAQPGLKA

Sequences:

>Translated_280_residues
MLDISDNTSSTMREIFGRDKALIGMIHCPAFPGAPRYRGASMTEIYDACMLDAEALIEGGMHGLIIENHGDIPFSKPDDI
GPETSAFMSVVTDRICRAVGVPLGINVLANAPIPAFAIAMAGGAKFVRVNQWANAYVANEGFMEGRAAEAMRYRSMLRAE
HIKVFADSHVKHGAHAITADRTIQELTRDLAFFDADAVIATGQRTGNSATMEEIEEIGAATHLPLLVGSGVSKDNIVEIL
KRTNGVIVASSLKHGDVWWNPVDIERVKAFVATAQPGLKA
>Mature_280_residues
MLDISDNTSSTMREIFGRDKALIGMIHCPAFPGAPRYRGASMTEIYDACMLDAEALIEGGMHGLIIENHGDIPFSKPDDI
GPETSAFMSVVTDRICRAVGVPLGINVLANAPIPAFAIAMAGGAKFVRVNQWANAYVANEGFMEGRAAEAMRYRSMLRAE
HIKVFADSHVKHGAHAITADRTIQELTRDLAFFDADAVIATGQRTGNSATMEEIEEIGAATHLPLLVGSGVSKDNIVEIL
KRTNGVIVASSLKHGDVWWNPVDIERVKAFVATAQPGLKA

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=267, Percent_Identity=28.4644194756554, Blast_Score=105, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI115532828, Length=255, Percent_Identity=36.078431372549, Blast_Score=167, Evalue=6e-42,
Organism=Drosophila melanogaster, GI24659916, Length=256, Percent_Identity=35.15625, Blast_Score=155, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 30117; Mature: 30117

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDISDNTSSTMREIFGRDKALIGMIHCPAFPGAPRYRGASMTEIYDACMLDAEALIEGG
CCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCC
MHGLIIENHGDIPFSKPDDIGPETSAFMSVVTDRICRAVGVPLGINVLANAPIPAFAIAM
CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
AGGAKFVRVNQWANAYVANEGFMEGRAAEAMRYRSMLRAEHIKVFADSHVKHGAHAITAD
CCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
RTIQELTRDLAFFDADAVIATGQRTGNSATMEEIEEIGAATHLPLLVGSGVSKDNIVEIL
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHCCHHEECCCCCHHHHHHHH
KRTNGVIVASSLKHGDVWWNPVDIERVKAFVATAQPGLKA
HHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDISDNTSSTMREIFGRDKALIGMIHCPAFPGAPRYRGASMTEIYDACMLDAEALIEGG
CCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCC
MHGLIIENHGDIPFSKPDDIGPETSAFMSVVTDRICRAVGVPLGINVLANAPIPAFAIAM
CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
AGGAKFVRVNQWANAYVANEGFMEGRAAEAMRYRSMLRAEHIKVFADSHVKHGAHAITAD
CCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
RTIQELTRDLAFFDADAVIATGQRTGNSATMEEIEEIGAATHLPLLVGSGVSKDNIVEIL
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHCCHHEECCCCCHHHHHHHH
KRTNGVIVASSLKHGDVWWNPVDIERVKAFVATAQPGLKA
HHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]