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The map label for this gene is 222102770

Identifier: 222102770

GI number: 222102770

Start: 429225

End: 430457

Strand: Reverse

Name: 222102770

Synonym: Avi_7467

Alternate gene names: NA

Gene position: 430457-429225 (Counterclockwise)

Preceding gene: 222102778

Following gene: 222102769

Centisome position: 68.13

GC content: 56.2

Gene sequence:

>1233_bases
ATGAAAAAGTCACTCAAAGAACGCCTCGCCATCCTCTCGGATGCCGCAAAATACGATGCGTCTTGCGCCTCCAGCGGAAC
GACAAAGCGGAACGCAGCAGCCGCCGGCGGGCTGGGATCGACGGAGGGCTCCGGGATCTGCCATGCCTATGCGCCAGACG
GGCGATGCATCTCTCTCCTTAAAATCCTGATGACGAATTTCTGTATTTACGACTGTGCGTATTGTATCAACCGGTCGTCC
AGCAATGTTGAGCGGGCGCGGTTTTCGGTCGAGGACGTCATCTGGCTGACGCTCGAATTCTATCGCCGCAATTACATCGA
GGGTCTCTTTCTGTCCTCTGGCATTATCCGCTCTTCCGATTACACAATGGAGGAGATGGTCCGCATCGCCCGCGAATTGC
GTACGACACATAATTTTCATGGCTACATTCATCTCAAATCTATTCCCGAGGCATCGCCGCAACTGATTGAGGAAGCCGGG
CTCTACGCTGATCGCCTTTCGATCAATATCGAACTACCGACCGACGCGGGCATCGGGAAATTCGCCCCGGAAAAGCGGCC
GGACAATATTCGCCAGTCGATGGGTAATTTGCGCTTGAAGATTGAAGAAATGGCCGACCCGACCCTACAGACCAAACGGC
GAAAGAGGTTCGCACCCGCCGGGCAAAGCACACAGATGATCGTTGGCGCCGACGCTGCCGACGATGCGACCATCCTTGGC
ACCAGTGCCAGGCTCTATGGGAGTTACGGCTTGAAGCGTGTCTATTATTCCGCCTTCAGCCCGATCCCGGATTCGTCAAA
AAACCTTCCGCTGATCAAGCCGCCGCTGATGCGCGAGCATCGACTGTATCAGGCAGACTGGCTCTACCGTTTCTACGGAT
TCGACATCGCAGAGATCACGGCGGCACGGCCAGACGGCATGCTCGATCTCGACCTCGATCCGAAACTCGCCTGGGCGCTT
GGCCATCGCGATCGATTTCCAGTCGACATCAATCTCGCCGACAAGGAAGCGCTTCTGCGTGTGCCTGGCTTCGGCACAAA
AACCGTCACATCCATTCTCTCAACACGGCGGTTCAAGCGGCTGCGGCTCGAGGATATCGGACGTCTTGGCGTGTCCCTCA
AAAAAGTCCAGCCGTTCATCACCGCTGAGGGCTGGACGCCGCATCGCTTGATCGATCGCGCCGACTTGCGGGCGATGTTC
ATGCCAAAGCCCGAACAATTATCGTTATTATGA

Upstream 100 bases:

>100_bases
ATCATCCCTGCCGAGACGGAGTCAGGCCCCACTCTAGGAGATCGAACTGTAGACCGCGCCAATATTGACAGATACGATTA
GAACATTTAGTGAACATTTT

Downstream 100 bases:

>100_bases
CTGAGACCTGCTTTCTCGAAGGTCGCGGTGATCTGTCTGAATGGCGCGAGGCCGCGCGACGGTGCCTACAGGCTGGGATC
GAACCAAAGGCAATCGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKKSLKERLAILSDAAKYDASCASSGTTKRNAAAAGGLGSTEGSGICHAYAPDGRCISLLKILMTNFCIYDCAYCINRSS
SNVERARFSVEDVIWLTLEFYRRNYIEGLFLSSGIIRSSDYTMEEMVRIARELRTTHNFHGYIHLKSIPEASPQLIEEAG
LYADRLSINIELPTDAGIGKFAPEKRPDNIRQSMGNLRLKIEEMADPTLQTKRRKRFAPAGQSTQMIVGADAADDATILG
TSARLYGSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFDIAEITAARPDGMLDLDLDPKLAWAL
GHRDRFPVDINLADKEALLRVPGFGTKTVTSILSTRRFKRLRLEDIGRLGVSLKKVQPFITAEGWTPHRLIDRADLRAMF
MPKPEQLSLL

Sequences:

>Translated_410_residues
MKKSLKERLAILSDAAKYDASCASSGTTKRNAAAAGGLGSTEGSGICHAYAPDGRCISLLKILMTNFCIYDCAYCINRSS
SNVERARFSVEDVIWLTLEFYRRNYIEGLFLSSGIIRSSDYTMEEMVRIARELRTTHNFHGYIHLKSIPEASPQLIEEAG
LYADRLSINIELPTDAGIGKFAPEKRPDNIRQSMGNLRLKIEEMADPTLQTKRRKRFAPAGQSTQMIVGADAADDATILG
TSARLYGSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFDIAEITAARPDGMLDLDLDPKLAWAL
GHRDRFPVDINLADKEALLRVPGFGTKTVTSILSTRRFKRLRLEDIGRLGVSLKKVQPFITAEGWTPHRLIDRADLRAMF
MPKPEQLSLL
>Mature_410_residues
MKKSLKERLAILSDAAKYDASCASSGTTKRNAAAAGGLGSTEGSGICHAYAPDGRCISLLKILMTNFCIYDCAYCINRSS
SNVERARFSVEDVIWLTLEFYRRNYIEGLFLSSGIIRSSDYTMEEMVRIARELRTTHNFHGYIHLKSIPEASPQLIEEAG
LYADRLSINIELPTDAGIGKFAPEKRPDNIRQSMGNLRLKIEEMADPTLQTKRRKRFAPAGQSTQMIVGADAADDATILG
TSARLYGSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFDIAEITAARPDGMLDLDLDPKLAWAL
GHRDRFPVDINLADKEALLRVPGFGTKTVTSILSTRRFKRLRLEDIGRLGVSLKKVQPFITAEGWTPHRLIDRADLRAMF
MPKPEQLSLL

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46025; Mature: 46025

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLKERLAILSDAAKYDASCASSGTTKRNAAAAGGLGSTEGSGICHAYAPDGRCISLL
CCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCHHHHHH
KILMTNFCIYDCAYCINRSSSNVERARFSVEDVIWLTLEFYRRNYIEGLFLSSGIIRSSD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
YTMEEMVRIARELRTTHNFHGYIHLKSIPEASPQLIEEAGLYADRLSINIELPTDAGIGK
CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCEEEEEEEEEEECCCCCCCC
FAPEKRPDNIRQSMGNLRLKIEEMADPTLQTKRRKRFAPAGQSTQMIVGADAADDATILG
CCCCCCCHHHHHHHCCEEEEEHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEE
TSARLYGSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFDIAEIT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHC
AARPDGMLDLDLDPKLAWALGHRDRFPVDINLADKEALLRVPGFGTKTVTSILSTRRFKR
CCCCCCEEEECCCCCCEEEECCCCCCCEEEEECCCHHEEECCCCCHHHHHHHHHHHHHHH
LRLEDIGRLGVSLKKVQPFITAEGWTPHRLIDRADLRAMFMPKPEQLSLL
HHHHHHHHHCCCHHHCCCEEEECCCCHHHHHHHHCCCEEECCCCHHCCCC
>Mature Secondary Structure
MKKSLKERLAILSDAAKYDASCASSGTTKRNAAAAGGLGSTEGSGICHAYAPDGRCISLL
CCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCHHHHHH
KILMTNFCIYDCAYCINRSSSNVERARFSVEDVIWLTLEFYRRNYIEGLFLSSGIIRSSD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
YTMEEMVRIARELRTTHNFHGYIHLKSIPEASPQLIEEAGLYADRLSINIELPTDAGIGK
CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCEEEEEEEEEEECCCCCCCC
FAPEKRPDNIRQSMGNLRLKIEEMADPTLQTKRRKRFAPAGQSTQMIVGADAADDATILG
CCCCCCCHHHHHHHCCEEEEEHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEE
TSARLYGSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFDIAEIT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHC
AARPDGMLDLDLDPKLAWALGHRDRFPVDINLADKEALLRVPGFGTKTVTSILSTRRFKR
CCCCCCEEEECCCCCCEEEECCCCCCCEEEEECCCHHEEECCCCCHHHHHHHHHHHHHHH
LRLEDIGRLGVSLKKVQPFITAEGWTPHRLIDRADLRAMFMPKPEQLSLL
HHHHHHHHHCCCHHHCCCEEEECCCCHHHHHHHHCCCEEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA