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The map label for this gene is bphC3 [H]

Identifier: 222102744

GI number: 222102744

Start: 398827

End: 399360

Strand: Direct

Name: bphC3 [H]

Synonym: Avi_7428

Alternate gene names: 222102744

Gene position: 398827-399360 (Clockwise)

Preceding gene: 222102743

Following gene: 222102745

Centisome position: 63.13

GC content: 52.62

Gene sequence:

>534_bases
ATGCAACAGGTTTCCATCAGCCATGTCGGGCTTTTCGTTCACGATCTCGCGCTCATGCGTGAATATTACATCAATGTGCT
CGGGTTTATCGTCACAGATGAAGTGCCGGGCAGAATGTGCTTCTTGAGCCGCAACATCGAGGAACATCACCAGGTTGCGC
TATTTGCTGGCCGGACAGCTGACACCCCGCAGGTGCAGCAGCTTTCGTTCAAGTTGGACACGCTTGAAGAAGTGCGTGAA
GTCCATCGTCGTCTTGTTGATGCTGGCACTAAGGAGATGCGCTGCGTGAGCCACGGCATTGCCTGGTCAATCTATTTCCC
TGATCCTGAGGGCAACCGGCTGGAATATTTCACCGACACGGAATGGTATGTCAAACAGCCTTGCGCCGATCCGGTCGATT
TCACCCTTCCGGCCGATGAGATTTATCGCATATCCGAGGCAACCAATCGTGCGCATGAAGACTTCCAGCCGTTGCACGAA
TGGCGCGATCGTTTCAACGAAAAGCTGAAGCAGAAGATCTTGGAAACCCAGTAA

Upstream 100 bases:

>100_bases
TATAACGATATTGACGTCAATCTCAATTTGTGAGATTGATATGGTATTCGATATTGGGAATATCGTTCTGTTATCAAAAA
TGAGTTTCAGGGAGGTAGGA

Downstream 100 bases:

>100_bases
CGCTTCGGCGCAAAGTGCCGGATCGGCAATCGTGCGCGCGTTGACGAGGCACTGGATTCTGTCCGGCTCAGATTGAGCCG
GACAGAGTCTAGGAAGCCGG

Product: ring-cleavage extradiol dioxygenase

Products: NA

Alternate protein names: 2,3-dihydroxybiphenyl dioxygenase III; DHBD III; 23OHBP oxygenase III; Biphenyl-2,3-diol 1,2-dioxygenase III [H]

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MQQVSISHVGLFVHDLALMREYYINVLGFIVTDEVPGRMCFLSRNIEEHHQVALFAGRTADTPQVQQLSFKLDTLEEVRE
VHRRLVDAGTKEMRCVSHGIAWSIYFPDPEGNRLEYFTDTEWYVKQPCADPVDFTLPADEIYRISEATNRAHEDFQPLHE
WRDRFNEKLKQKILETQ

Sequences:

>Translated_177_residues
MQQVSISHVGLFVHDLALMREYYINVLGFIVTDEVPGRMCFLSRNIEEHHQVALFAGRTADTPQVQQLSFKLDTLEEVRE
VHRRLVDAGTKEMRCVSHGIAWSIYFPDPEGNRLEYFTDTEWYVKQPCADPVDFTLPADEIYRISEATNRAHEDFQPLHE
WRDRFNEKLKQKILETQ
>Mature_177_residues
MQQVSISHVGLFVHDLALMREYYINVLGFIVTDEVPGRMCFLSRNIEEHHQVALFAGRTADTPQVQQLSFKLDTLEEVRE
VHRRLVDAGTKEMRCVSHGIAWSIYFPDPEGNRLEYFTDTEWYVKQPCADPVDFTLPADEIYRISEATNRAHEDFQPLHE
WRDRFNEKLKQKILETQ

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR000486 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: =1.13.11.39 [H]

Molecular weight: Translated: 20798; Mature: 20798

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVSISHVGLFVHDLALMREYYINVLGFIVTDEVPGRMCFLSRNIEEHHQVALFAGRTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHEEEEEECCCC
DTPQVQQLSFKLDTLEEVREVHRRLVDAGTKEMRCVSHGIAWSIYFPDPEGNRLEYFTDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCEEEEEECC
EWYVKQPCADPVDFTLPADEIYRISEATNRAHEDFQPLHEWRDRFNEKLKQKILETQ
CHHECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQVSISHVGLFVHDLALMREYYINVLGFIVTDEVPGRMCFLSRNIEEHHQVALFAGRTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHEEEEEECCCC
DTPQVQQLSFKLDTLEEVREVHRRLVDAGTKEMRCVSHGIAWSIYFPDPEGNRLEYFTDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCEEEEEECC
EWYVKQPCADPVDFTLPADEIYRISEATNRAHEDFQPLHEWRDRFNEKLKQKILETQ
CHHECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8126007 [H]