Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102722

Identifier: 222102722

GI number: 222102722

Start: 373498

End: 374628

Strand: Direct

Name: 222102722

Synonym: Avi_7399

Alternate gene names: NA

Gene position: 373498-374628 (Clockwise)

Preceding gene: 222102719

Following gene: 222102723

Centisome position: 59.12

GC content: 58.53

Gene sequence:

>1131_bases
ATGCGCGTCGTAGTGATAGGGGCCGGGATCGTTGGCAGTTCCGTGGCCTATGAGGCAGCTAAAGCCGGGGCTCAGGTAAC
CGTACTTGAGGCTGGGAGGATCGCTGGCGGAGCATCCACCTCCAGTTTCGCCTGGACCAATGCGACGGGCAAGAGGCCTC
AGCCCTACTTCGCGTTAAATGTTGCCGGCATGCGGGCGCATCTCGATCTTGCTCGTGAATTTGGTCATGCACCATGGTTC
CACCAGACCGGCAGCATCGAATGGTATTCGGACGAGAGCGATTGGCCAGCCCAACTCGACAATGCCGACCAAATGCGCGA
CTGGGGCTACGGTGTCGAGTGGATCAGCAAAAGCCGGCTGACTGAGCTGGAACCGGAAATCGATCACGGCGCAATCAAAC
AATCACCGCTCGTCTATTATCCCGAAGAGGGTTGGGTCCATCCAGCTCTCTATGCTGCCTGGCTTCTGCGCGCGGCGAAA
GAAAAGTGGAACGCCGATATCCGACCGTTCTCCGGCGTCACGTCGATCGATGTTCAAAATGGCGTAGCGAAAGCGGTCAA
GACCGTCGACGGAGCGGCCTTTGAGGCTGATGCCATCATCAATTGCACGGGTAGCTGGGCGGCGCATGTTTTGGAAGGCG
TGCCAGCCATTCCGATGGCATCGAATATGGGCATTGTGGGCTTCACATTGCCGATCGCGACAACGCTTCGTCGTCAATTC
CATATGGACGATCTTGATGTGCGTCCGGATGGCGCCGGCCGTCTCATGATCCACAAGGTCTCGGTCGACTCTCTCGTCAC
TAAGATGCAGCCCCTGAACACGCAAGGCCCGGAAGCCGCCCTCCTGCTGGACGCCGTTAGAAAGGTTCTGCCCGCGATTC
AGCCTGACGATATGGAATCGATCCGCACGATCGTGCGACCGATACCCGGCGACAACCTGACCTGCAGCGGGTGGGTTCCT
GGAGTGGATGGCTATTACGTTGCCGTCACCCATAGCGGCGTATCGATCGCACCTCATCTGGGCAAAGCGGTAGCTCAGGA
GGTGGTCCGCGGGCGTCTCCACGAGAGCCTCACTGATTTCCGCCCTGACCGCTTTCTAGCCGCAAAGAATGGAATGGGAC
AAAGAGCATGA

Upstream 100 bases:

>100_bases
TCCGCTCCTGCGTCACCCATACATGCTCACATCATTCCATTTATTGCCTTCCGAACTGAGGGTGGAATGCCGGTCGAACT
GAGGTCAAGAGGAGAAAAAT

Downstream 100 bases:

>100_bases
CGATTACCCGCATCGCGAAAACCGAACGACTGAGCCGTGTCGTTATTCATGAGAAAGTCGCATATTTCTCAGGTCTGACT
GCCGATGACAGGAGCCAGGA

Product: oxidoreductase

Products: NA

Alternate protein names: Fructosyl-Amino Acid Oxidase; D-Amino Acid Oxidase Protein; Oxidoreductase; Glycine/D-Amino Acid Oxidase Deaminating; Glycine Oxidase ThiO; Splicing Factor Proline- And Glutamine-Rich; D-Amino Acid Oxidase; Fructosyl Amino Acid Oxidase; Sarcosine Oxidase Subunit Beta

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRVVVIGAGIVGSSVAYEAAKAGAQVTVLEAGRIAGGASTSSFAWTNATGKRPQPYFALNVAGMRAHLDLAREFGHAPWF
HQTGSIEWYSDESDWPAQLDNADQMRDWGYGVEWISKSRLTELEPEIDHGAIKQSPLVYYPEEGWVHPALYAAWLLRAAK
EKWNADIRPFSGVTSIDVQNGVAKAVKTVDGAAFEADAIINCTGSWAAHVLEGVPAIPMASNMGIVGFTLPIATTLRRQF
HMDDLDVRPDGAGRLMIHKVSVDSLVTKMQPLNTQGPEAALLLDAVRKVLPAIQPDDMESIRTIVRPIPGDNLTCSGWVP
GVDGYYVAVTHSGVSIAPHLGKAVAQEVVRGRLHESLTDFRPDRFLAAKNGMGQRA

Sequences:

>Translated_376_residues
MRVVVIGAGIVGSSVAYEAAKAGAQVTVLEAGRIAGGASTSSFAWTNATGKRPQPYFALNVAGMRAHLDLAREFGHAPWF
HQTGSIEWYSDESDWPAQLDNADQMRDWGYGVEWISKSRLTELEPEIDHGAIKQSPLVYYPEEGWVHPALYAAWLLRAAK
EKWNADIRPFSGVTSIDVQNGVAKAVKTVDGAAFEADAIINCTGSWAAHVLEGVPAIPMASNMGIVGFTLPIATTLRRQF
HMDDLDVRPDGAGRLMIHKVSVDSLVTKMQPLNTQGPEAALLLDAVRKVLPAIQPDDMESIRTIVRPIPGDNLTCSGWVP
GVDGYYVAVTHSGVSIAPHLGKAVAQEVVRGRLHESLTDFRPDRFLAAKNGMGQRA
>Mature_376_residues
MRVVVIGAGIVGSSVAYEAAKAGAQVTVLEAGRIAGGASTSSFAWTNATGKRPQPYFALNVAGMRAHLDLAREFGHAPWF
HQTGSIEWYSDESDWPAQLDNADQMRDWGYGVEWISKSRLTELEPEIDHGAIKQSPLVYYPEEGWVHPALYAAWLLRAAK
EKWNADIRPFSGVTSIDVQNGVAKAVKTVDGAAFEADAIINCTGSWAAHVLEGVPAIPMASNMGIVGFTLPIATTLRRQF
HMDDLDVRPDGAGRLMIHKVSVDSLVTKMQPLNTQGPEAALLLDAVRKVLPAIQPDDMESIRTIVRPIPGDNLTCSGWVP
GVDGYYVAVTHSGVSIAPHLGKAVAQEVVRGRLHESLTDFRPDRFLAAKNGMGQRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40671; Mature: 40671

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVVIGAGIVGSSVAYEAAKAGAQVTVLEAGRIAGGASTSSFAWTNATGKRPQPYFALN
CEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEE
VAGMRAHLDLAREFGHAPWFHQTGSIEWYSDESDWPAQLDNADQMRDWGYGVEWISKSRL
ECCHHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHC
TELEPEIDHGAIKQSPLVYYPEEGWVHPALYAAWLLRAAKEKWNADIRPFSGVTSIDVQN
CCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHH
GVAKAVKTVDGAAFEADAIINCTGSWAAHVLEGVPAIPMASNMGIVGFTLPIATTLRRQF
HHHHHHHHHCCCCEECCEEEEECCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
HMDDLDVRPDGAGRLMIHKVSVDSLVTKMQPLNTQGPEAALLLDAVRKVLPAIQPDDMES
CCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
IRTIVRPIPGDNLTCSGWVPGVDGYYVAVTHSGVSIAPHLGKAVAQEVVRGRLHESLTDF
HHHHHCCCCCCCEEECCCCCCCCCEEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHC
RPDRFLAAKNGMGQRA
CCCCEEEECCCCCCCC
>Mature Secondary Structure
MRVVVIGAGIVGSSVAYEAAKAGAQVTVLEAGRIAGGASTSSFAWTNATGKRPQPYFALN
CEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEE
VAGMRAHLDLAREFGHAPWFHQTGSIEWYSDESDWPAQLDNADQMRDWGYGVEWISKSRL
ECCHHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHC
TELEPEIDHGAIKQSPLVYYPEEGWVHPALYAAWLLRAAKEKWNADIRPFSGVTSIDVQN
CCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHH
GVAKAVKTVDGAAFEADAIINCTGSWAAHVLEGVPAIPMASNMGIVGFTLPIATTLRRQF
HHHHHHHHHCCCCEECCEEEEECCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
HMDDLDVRPDGAGRLMIHKVSVDSLVTKMQPLNTQGPEAALLLDAVRKVLPAIQPDDMES
CCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
IRTIVRPIPGDNLTCSGWVPGVDGYYVAVTHSGVSIAPHLGKAVAQEVVRGRLHESLTDF
HHHHHCCCCCCCEEECCCCCCCCCEEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHC
RPDRFLAAKNGMGQRA
CCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA