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The map label for this gene is araB [H]

Identifier: 222102700

GI number: 222102700

Start: 348707

End: 350341

Strand: Reverse

Name: araB [H]

Synonym: Avi_7374

Alternate gene names: 222102700

Gene position: 350341-348707 (Counterclockwise)

Preceding gene: 222102701

Following gene: 222102697

Centisome position: 55.45

GC content: 59.76

Gene sequence:

>1635_bases
ATGATCGAAGCACCTGACACCATCGCGACCGGGCTTGAGCGCTACATTATCGGCGTCGACGTCGGCACAGGCAGCGCCCG
TGCCGGCCTGTTTGATCTGAGCGGTACGCTTGTAGCCGTTGCCAAACACGATATTGCGCTGTTTCGCGAGACAGGGGCAA
TTGCCGAGCAGTCCAGCACAGACATCTGGGATGCGGTCTGCACGGTTGTCCGGCAGGTTGCCGAAGGTGTGGACGATCCA
GCTCATGTCATCGGCCTAGGCTTTGATGCCACCTGCTCGCTGGTGGTGCTGGGTGAAGGGGGAAAGCCATTGCCCGTTGG
CTCGTCAGAGCTTGCTGAGCGGGACATTATCGTCTGGATGGATCAACGTGCCGTGACGCAAGCGGAGAAAATCAACACCA
TTGGCCATGACGTGTTGCGCTATGTCGGCGGCAAAATCTCGCCAGAGATGGAAACGCCCAAGCTTCTCTGGCTGAAGGAA
AATCGCCCCGACACCTTCAAAAGCGCTTGGCAGTTTTTCGACCTTGCCGATTTTCTCACCTGGAAAGCAACGGGCGATCT
TGCCCGCTCCACCTGTACCGTGACCTGCAAATGGACCTATCTGGCCCATGAACAACGCTGGGACCCCAGCTATTTCCACG
CCATCGGGCTGGAAGAGCTTGCCGATGAAGGTTTTGCCCGGATCGGCCAGCAGATTGTCGAACCCGGAACGCCGCTGGGG
CAGGGGCTAACGGAAGCCGCCGCTGCCGCCATGGGCCTGAGAAATGGAACGGCCGTGGCCGCAGGCATGATTGATGCCCA
CGCGGGCGGCATTGGCACCGTTGGCATTGGCAGCGGCCCGAAAGACAATATGGCCTATGTGTTTGGCACATCCTCTTGCA
CCATGACCTCAACGGTTGAGCCTGTGTTTGTGCCCGGTGTCTGGGGGCCATATTATTCTGCCATGGTGCCGGGCATGTGG
CTCAATGAGGGTGGCCAGAGTGCAGCCGGTGCGGCCATTGACCAATTGCTGGCCTTTCACCCGGCAGCGCCGGAGGCAGC
CGCAAAGGCACGCGAACAGGGTGTTGCGCGGCCGGTTCTGTTGGCGCAGGCGGCAGCGGCCAAGGTCAACGCCCTGCCCG
ATGTCGTGCATTTGGCGAAAGGTCTGCACATCGTGCCGGAATTCCTCGGCAACCGCGCGCCTTTTGCCGATCCCCACGCA
CGTGCCATCATTGCTGGTCTGGGCATGGATCGGGATTTTGATAGTCTGGTTGCGCTCTATATCGCGGGCCTGTGCGGCAT
TGGCTATGGTCTTCGGCAAATCATCGAGACACAGGCCGCATCGGGCGCGTTTATTGAGCGAGTGGTGATCAGCGGTGGTG
CTGGTGAGAGCGATCTGGTGCGGCAGGTGTTGGCCGATGCTTGCGGCAAGCCCGTGGTGGCTGCGGGTCTGGATGAGCCG
GTGTTGCTGGGCTCCGCGATTCTGGGTGCTGTGGCGGGAAAGGCCTTTTCAGGTGTCAGCCAGGCAATGGAAGCTTTAAG
CGGCGTAACAAAGACCTATCATCCGCAGGTCGGCGCTTTGGCCAATATCCACAAACGCAGATACAGCCATTTCACAACGC
TACAGCAACAGGGTAGAGCGTTACGCGACGTGTAA

Upstream 100 bases:

>100_bases
CCATCCGTGATCTGGTGATTGTGCCCAACAGCGTCGATCTTTAATCGACGCTCATCCTCATCCTCATCATTATCCCATCT
ATATTTGAAGAGCATTTGCC

Downstream 100 bases:

>100_bases
ATGCGCTCAATATCCTTGGGGTTCTCCGACACCTGGACGAAACGACGAGCAGATAATCCGATCGAAATGTTGGCCTCTTG
AAATGCTGGTCAGCTTTGGA

Product: ribitol kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MIEAPDTIATGLERYIIGVDVGTGSARAGLFDLSGTLVAVAKHDIALFRETGAIAEQSSTDIWDAVCTVVRQVAEGVDDP
AHVIGLGFDATCSLVVLGEGGKPLPVGSSELAERDIIVWMDQRAVTQAEKINTIGHDVLRYVGGKISPEMETPKLLWLKE
NRPDTFKSAWQFFDLADFLTWKATGDLARSTCTVTCKWTYLAHEQRWDPSYFHAIGLEELADEGFARIGQQIVEPGTPLG
QGLTEAAAAAMGLRNGTAVAAGMIDAHAGGIGTVGIGSGPKDNMAYVFGTSSCTMTSTVEPVFVPGVWGPYYSAMVPGMW
LNEGGQSAAGAAIDQLLAFHPAAPEAAAKAREQGVARPVLLAQAAAAKVNALPDVVHLAKGLHIVPEFLGNRAPFADPHA
RAIIAGLGMDRDFDSLVALYIAGLCGIGYGLRQIIETQAASGAFIERVVISGGAGESDLVRQVLADACGKPVVAAGLDEP
VLLGSAILGAVAGKAFSGVSQAMEALSGVTKTYHPQVGALANIHKRRYSHFTTLQQQGRALRDV

Sequences:

>Translated_544_residues
MIEAPDTIATGLERYIIGVDVGTGSARAGLFDLSGTLVAVAKHDIALFRETGAIAEQSSTDIWDAVCTVVRQVAEGVDDP
AHVIGLGFDATCSLVVLGEGGKPLPVGSSELAERDIIVWMDQRAVTQAEKINTIGHDVLRYVGGKISPEMETPKLLWLKE
NRPDTFKSAWQFFDLADFLTWKATGDLARSTCTVTCKWTYLAHEQRWDPSYFHAIGLEELADEGFARIGQQIVEPGTPLG
QGLTEAAAAAMGLRNGTAVAAGMIDAHAGGIGTVGIGSGPKDNMAYVFGTSSCTMTSTVEPVFVPGVWGPYYSAMVPGMW
LNEGGQSAAGAAIDQLLAFHPAAPEAAAKAREQGVARPVLLAQAAAAKVNALPDVVHLAKGLHIVPEFLGNRAPFADPHA
RAIIAGLGMDRDFDSLVALYIAGLCGIGYGLRQIIETQAASGAFIERVVISGGAGESDLVRQVLADACGKPVVAAGLDEP
VLLGSAILGAVAGKAFSGVSQAMEALSGVTKTYHPQVGALANIHKRRYSHFTTLQQQGRALRDV
>Mature_544_residues
MIEAPDTIATGLERYIIGVDVGTGSARAGLFDLSGTLVAVAKHDIALFRETGAIAEQSSTDIWDAVCTVVRQVAEGVDDP
AHVIGLGFDATCSLVVLGEGGKPLPVGSSELAERDIIVWMDQRAVTQAEKINTIGHDVLRYVGGKISPEMETPKLLWLKE
NRPDTFKSAWQFFDLADFLTWKATGDLARSTCTVTCKWTYLAHEQRWDPSYFHAIGLEELADEGFARIGQQIVEPGTPLG
QGLTEAAAAAMGLRNGTAVAAGMIDAHAGGIGTVGIGSGPKDNMAYVFGTSSCTMTSTVEPVFVPGVWGPYYSAMVPGMW
LNEGGQSAAGAAIDQLLAFHPAAPEAAAKAREQGVARPVLLAQAAAAKVNALPDVVHLAKGLHIVPEFLGNRAPFADPHA
RAIIAGLGMDRDFDSLVALYIAGLCGIGYGLRQIIETQAASGAFIERVVISGGAGESDLVRQVLADACGKPVVAAGLDEP
VLLGSAILGAVAGKAFSGVSQAMEALSGVTKTYHPQVGALANIHKRRYSHFTTLQQQGRALRDV

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=545, Percent_Identity=44.5871559633028, Blast_Score=444, Evalue=1e-124,
Organism=Homo sapiens, GI164663830, Length=569, Percent_Identity=42.7065026362039, Blast_Score=430, Evalue=1e-120,
Organism=Escherichia coli, GI1786249, Length=510, Percent_Identity=25.8823529411765, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1787789, Length=524, Percent_Identity=24.618320610687, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1789987, Length=537, Percent_Identity=21.415270018622, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320314, Length=518, Percent_Identity=38.6100386100386, Blast_Score=333, Evalue=6e-92,
Organism=Drosophila melanogaster, GI24657106, Length=541, Percent_Identity=41.5896487985213, Blast_Score=386, Evalue=1e-107,
Organism=Drosophila melanogaster, GI24657102, Length=541, Percent_Identity=41.5896487985213, Blast_Score=386, Evalue=1e-107,
Organism=Drosophila melanogaster, GI21356323, Length=436, Percent_Identity=39.9082568807339, Blast_Score=295, Evalue=4e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 57051; Mature: 57051

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAPDTIATGLERYIIGVDVGTGSARAGLFDLSGTLVAVAKHDIALFRETGAIAEQSST
CCCCCHHHHHHHHHEEEEEEECCCCCCCCEEECCCCEEEEEHHHHHHHHHHCCHHCCCCC
DIWDAVCTVVRQVAEGVDDPAHVIGLGFDATCSLVVLGEGGKPLPVGSSELAERDIIVWM
HHHHHHHHHHHHHHHCCCCCHHEEEECCCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEE
DQRAVTQAEKINTIGHDVLRYVGGKISPEMETPKLLWLKENRPDTFKSAWQFFDLADFLT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
WKATGDLARSTCTVTCKWTYLAHEQRWDPSYFHAIGLEELADEGFARIGQQIVEPGTPLG
HCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHH
QGLTEAAAAAMGLRNGTAVAAGMIDAHAGGIGTVGIGSGPKDNMAYVFGTSSCTMTSTVE
CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCEEECCCC
PVFVPGVWGPYYSAMVPGMWLNEGGQSAAGAAIDQLLAFHPAAPEAAAKAREQGVARPVL
CEEECCCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHH
LAQAAAAKVNALPDVVHLAKGLHIVPEFLGNRAPFADPHARAIIAGLGMDRDFDSLVALY
HHHHHHHHHHCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
IAGLCGIGYGLRQIIETQAASGAFIERVVISGGAGESDLVRQVLADACGKPVVAAGLDEP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEECCCCCH
VLLGSAILGAVAGKAFSGVSQAMEALSGVTKTYHPQVGALANIHKRRYSHFTTLQQQGRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHH
LRDV
HCCC
>Mature Secondary Structure
MIEAPDTIATGLERYIIGVDVGTGSARAGLFDLSGTLVAVAKHDIALFRETGAIAEQSST
CCCCCHHHHHHHHHEEEEEEECCCCCCCCEEECCCCEEEEEHHHHHHHHHHCCHHCCCCC
DIWDAVCTVVRQVAEGVDDPAHVIGLGFDATCSLVVLGEGGKPLPVGSSELAERDIIVWM
HHHHHHHHHHHHHHHCCCCCHHEEEECCCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEE
DQRAVTQAEKINTIGHDVLRYVGGKISPEMETPKLLWLKENRPDTFKSAWQFFDLADFLT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
WKATGDLARSTCTVTCKWTYLAHEQRWDPSYFHAIGLEELADEGFARIGQQIVEPGTPLG
HCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHH
QGLTEAAAAAMGLRNGTAVAAGMIDAHAGGIGTVGIGSGPKDNMAYVFGTSSCTMTSTVE
CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCEEECCCC
PVFVPGVWGPYYSAMVPGMWLNEGGQSAAGAAIDQLLAFHPAAPEAAAKAREQGVARPVL
CEEECCCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHH
LAQAAAAKVNALPDVVHLAKGLHIVPEFLGNRAPFADPHARAIIAGLGMDRDFDSLVALY
HHHHHHHHHHCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
IAGLCGIGYGLRQIIETQAASGAFIERVVISGGAGESDLVRQVLADACGKPVVAAGLDEP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEECCCCCH
VLLGSAILGAVAGKAFSGVSQAMEALSGVTKTYHPQVGALANIHKRRYSHFTTLQQQGRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHH
LRDV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA