| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is asg [H]
Identifier: 222102658
GI number: 222102658
Start: 298934
End: 299899
Strand: Reverse
Name: asg [H]
Synonym: Avi_7322
Alternate gene names: 222102658
Gene position: 299899-298934 (Counterclockwise)
Preceding gene: 222102659
Following gene: 222102656
Centisome position: 47.47
GC content: 60.35
Gene sequence:
>966_bases ATGAGCAATACCCAACCAAGCCCCTTTGCGATTGCCATTCACGGCGGCTGCGGCGTGATGAACAAGGCCGACATGCCGGA GAGCGAATGGGAAGCCGCCCGCGCTGACCTCAAACGCGCATTAAAGGCCGGATGGAGCTTGTTGCAACAAGGCGCATCCG CGCTCGACGCCGTCGAAGCCGCCGTTATGGTGATGGAGGATTCGGAGCATTTCAACGCGGGCCATGGCGCAGCACTCAAC ACCGATGGCGAACACGAGTTGGATGCCTCCATTATGGATGGTCAGACCCTTGAGGCGGGTGCCATTGCCATGGCACGCAC GATCCGCAACCCGATTCGTGCCGCCCGCAAACTGATGCACAGCGGCGAGACCGTGATGCTGGGGGCAAGTGCTGCCGATG CCTTTGCCCAAAAATCGGGCCTGCCGATGGTGGAACAGTCCTATTTCACCACCGAGCGCCGGGTTAAAGCACTGGCATCG TTGAAAGAACACGCCAAAGCCGGAACGGCAGCCCTTGCCAGCGAGGCCGAAAAGCATGGCACGGTTGGCGCCGTGGCGCT GGACAGCCACGGCCACCTTGCCGCCGCCACCTCCACTGGCGGCTTCAACAACAAGCCTTCAGGCCGCATTGGCGACACCG CTGTGATCGGCGCCGGAACCTACGCCCGCGATGGCGTGGTGGCTGTCTCCGGTACTGGCAAGGGTGAGTTTTTCATCCGC CATGCCGTGGGCCACGAAATCGCCAGCCGCATGCGGTATTTGGGCGAAAATCTGGAAGACGCCTGCCAGCATGTCGTGTT CACCGATCTTGCCCCCCATCATATCGGAGCAGGGCTTGTCGCGGTTGGTGCAGATGGCTCCATCACAGCACCTTATAATA CCGCCGGGATGTTTCGCGGCTGGATTAATCTGGATGGGCACATGGTTGTCGCAAGCCATGACACGCTGTTTGAAATGCAT ATCTAG
Upstream 100 bases:
>100_bases AAGCGTTGAACATGCCGTGCGGATGATCAACAGCCTATCCGCCATGTCCACCATGCTGCGCTAACGGCGGGCGATCTATT TTGAGCATTTCGAGGCATTT
Downstream 100 bases:
>100_bases AGAATTGTTTCGTTTTATGGAAACACTGAATGTTGGAGCAGTGTCGGAGGTTGACCTCTATGATCACTCCCGTAGAGCCG TGATTTTTTGAGATAAAATG
Product: asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSNTQPSPFAIAIHGGCGVMNKADMPESEWEAARADLKRALKAGWSLLQQGASALDAVEAAVMVMEDSEHFNAGHGAALN TDGEHELDASIMDGQTLEAGAIAMARTIRNPIRAARKLMHSGETVMLGASAADAFAQKSGLPMVEQSYFTTERRVKALAS LKEHAKAGTAALASEAEKHGTVGAVALDSHGHLAAATSTGGFNNKPSGRIGDTAVIGAGTYARDGVVAVSGTGKGEFFIR HAVGHEIASRMRYLGENLEDACQHVVFTDLAPHHIGAGLVAVGADGSITAPYNTAGMFRGWINLDGHMVVASHDTLFEMH I
Sequences:
>Translated_321_residues MSNTQPSPFAIAIHGGCGVMNKADMPESEWEAARADLKRALKAGWSLLQQGASALDAVEAAVMVMEDSEHFNAGHGAALN TDGEHELDASIMDGQTLEAGAIAMARTIRNPIRAARKLMHSGETVMLGASAADAFAQKSGLPMVEQSYFTTERRVKALAS LKEHAKAGTAALASEAEKHGTVGAVALDSHGHLAAATSTGGFNNKPSGRIGDTAVIGAGTYARDGVVAVSGTGKGEFFIR HAVGHEIASRMRYLGENLEDACQHVVFTDLAPHHIGAGLVAVGADGSITAPYNTAGMFRGWINLDGHMVVASHDTLFEMH I >Mature_320_residues SNTQPSPFAIAIHGGCGVMNKADMPESEWEAARADLKRALKAGWSLLQQGASALDAVEAAVMVMEDSEHFNAGHGAALNT DGEHELDASIMDGQTLEAGAIAMARTIRNPIRAARKLMHSGETVMLGASAADAFAQKSGLPMVEQSYFTTERRVKALASL KEHAKAGTAALASEAEKHGTVGAVALDSHGHLAAATSTGGFNNKPSGRIGDTAVIGAGTYARDGVVAVSGTGKGEFFIRH AVGHEIASRMRYLGENLEDACQHVVFTDLAPHHIGAGLVAVGADGSITAPYNTAGMFRGWINLDGHMVVASHDTLFEMHI
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=235, Percent_Identity=42.5531914893617, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI145275200, Length=235, Percent_Identity=42.5531914893617, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI98991769, Length=269, Percent_Identity=33.8289962825279, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI285002251, Length=293, Percent_Identity=31.740614334471, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI285002253, Length=293, Percent_Identity=30.3754266211604, Blast_Score=89, Evalue=6e-18, Organism=Escherichia coli, GI1787050, Length=294, Percent_Identity=44.2176870748299, Blast_Score=223, Evalue=2e-59, Organism=Caenorhabditis elegans, GI32564649, Length=272, Percent_Identity=27.5735294117647, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI18921183, Length=321, Percent_Identity=35.202492211838, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI21357893, Length=268, Percent_Identity=30.9701492537313, Blast_Score=112, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 33492; Mature: 33361
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTQPSPFAIAIHGGCGVMNKADMPESEWEAARADLKRALKAGWSLLQQGASALDAVEA CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVMVMEDSEHFNAGHGAALNTDGEHELDASIMDGQTLEAGAIAMARTIRNPIRAARKLMH HEEEEECCCCCCCCCCCEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SGETVMLGASAADAFAQKSGLPMVEQSYFTTERRVKALASLKEHAKAGTAALASEAEKHG CCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TVGAVALDSHGHLAAATSTGGFNNKPSGRIGDTAVIGAGTYARDGVVAVSGTGKGEFFIR CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEE HAVGHEIASRMRYLGENLEDACQHVVFTDLAPHHIGAGLVAVGADGSITAPYNTAGMFRG HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCEEEECCCCCEECCCCCHHHEEE WINLDGHMVVASHDTLFEMHI EEECCCEEEEEECCCEEEECC >Mature Secondary Structure SNTQPSPFAIAIHGGCGVMNKADMPESEWEAARADLKRALKAGWSLLQQGASALDAVEA CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVMVMEDSEHFNAGHGAALNTDGEHELDASIMDGQTLEAGAIAMARTIRNPIRAARKLMH HEEEEECCCCCCCCCCCEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SGETVMLGASAADAFAQKSGLPMVEQSYFTTERRVKALASLKEHAKAGTAALASEAEKHG CCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TVGAVALDSHGHLAAATSTGGFNNKPSGRIGDTAVIGAGTYARDGVVAVSGTGKGEFFIR CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEE HAVGHEIASRMRYLGENLEDACQHVVFTDLAPHHIGAGLVAVGADGSITAPYNTAGMFRG HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCEEEECCCCCEECCCCCHHHEEE WINLDGHMVVASHDTLFEMHI EEECCCEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]