Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102655

Identifier: 222102655

GI number: 222102655

Start: 293638

End: 294453

Strand: Reverse

Name: 222102655

Synonym: Avi_7315

Alternate gene names: NA

Gene position: 294453-293638 (Counterclockwise)

Preceding gene: 222102656

Following gene: 222102648

Centisome position: 46.61

GC content: 53.92

Gene sequence:

>816_bases
ATGTCTCTTGGATGTTACGATATCGAAATGCGCACGCGGAACGCCGCCGTTCTCGTCGTGCTGTTCTCCCATTCGACCAA
GCATCATTTCAAGTCTGTCGATTTTCCGGCGGACGTCCTGAGCATCGCGGATAAGGAAGACACCTATTTCACCAACACGC
CAGATATTCTGGCGAATTTCATAAAAGATGTCAGTGCACCATACGATCTGGTGATTACGATTGGTGGAAGCAAAGGAGGG
CATGGGGCGCTGTATCACGGCACGCTTCTCGCTCGCATGATCGAAAAACCTGTTCGTGTTCTTGCCTTCAGCCCGGTTGT
CATGCTCTCGGATAACCCGAATGACGTGCTATATGTGTCCTACCAAAAGCTGATGGAGCGCGCGCAGACGACACCAGAAC
TGGCGGAAAACCTGCGCCAGTCAACCCAGGTGATAACAGCAGACCCGCCGCCCAATCTCACGGCCTTCTGCATCGTCGGG
GCCGACAATCACTGCGACTGTGTCGAGGCCAGCCGATTGATCGGCGCGCATATCTTGACGCTGCCCATGCATCACCATGA
AACTGTCATCCCATTCCTTTGCGATACCAGCGATGCCAGAGCAGTGACGAAAACCGTGCTGGTGCTGTACGATAGAGCCG
CAGAGGAGGCCGATGTTGCCCATCTGCTTGAAAAAGGCAGTGTTGACAAAATGATCGCGGACCTTTCCCGCGTTCCAAAA
CAGCCTCGCCTCGATGAACTGACGAATCTTGTCATAAAGGGTGATGCCAGCATTGTAAGGCAGGCTGTGACAACGGCAGG
CGCTCTTCAAGCCTGA

Upstream 100 bases:

>100_bases
TGACTGACGTCTACTCTTGCGAAGATCTGAGCGGCTTTATACGAACATCGGCAGAAGATTGCATTTGATCGCCTGCTGCA
CACAATGAAAGCCGCCAGAA

Downstream 100 bases:

>100_bases
TCGAATCGACCTAAAGCCTGCGCTTGCATTCATCATTGCCGCCACAAGCATCTCATAACGACCGAAGCCTTGCCTTGAAC
GACAAAGCTCAAACGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSLGCYDIEMRTRNAAVLVVLFSHSTKHHFKSVDFPADVLSIADKEDTYFTNTPDILANFIKDVSAPYDLVITIGGSKGG
HGALYHGTLLARMIEKPVRVLAFSPVVMLSDNPNDVLYVSYQKLMERAQTTPELAENLRQSTQVITADPPPNLTAFCIVG
ADNHCDCVEASRLIGAHILTLPMHHHETVIPFLCDTSDARAVTKTVLVLYDRAAEEADVAHLLEKGSVDKMIADLSRVPK
QPRLDELTNLVIKGDASIVRQAVTTAGALQA

Sequences:

>Translated_271_residues
MSLGCYDIEMRTRNAAVLVVLFSHSTKHHFKSVDFPADVLSIADKEDTYFTNTPDILANFIKDVSAPYDLVITIGGSKGG
HGALYHGTLLARMIEKPVRVLAFSPVVMLSDNPNDVLYVSYQKLMERAQTTPELAENLRQSTQVITADPPPNLTAFCIVG
ADNHCDCVEASRLIGAHILTLPMHHHETVIPFLCDTSDARAVTKTVLVLYDRAAEEADVAHLLEKGSVDKMIADLSRVPK
QPRLDELTNLVIKGDASIVRQAVTTAGALQA
>Mature_270_residues
SLGCYDIEMRTRNAAVLVVLFSHSTKHHFKSVDFPADVLSIADKEDTYFTNTPDILANFIKDVSAPYDLVITIGGSKGGH
GALYHGTLLARMIEKPVRVLAFSPVVMLSDNPNDVLYVSYQKLMERAQTTPELAENLRQSTQVITADPPPNLTAFCIVGA
DNHCDCVEASRLIGAHILTLPMHHHETVIPFLCDTSDARAVTKTVLVLYDRAAEEADVAHLLEKGSVDKMIADLSRVPKQ
PRLDELTNLVIKGDASIVRQAVTTAGALQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29589; Mature: 29458

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGCYDIEMRTRNAAVLVVLFSHSTKHHFKSVDFPADVLSIADKEDTYFTNTPDILANF
CCCCEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCHHHHHHCCCCCCEECCCHHHHHHH
IKDVSAPYDLVITIGGSKGGHGALYHGTLLARMIEKPVRVLAFSPVVMLSDNPNDVLYVS
HHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCEEEEE
YQKLMERAQTTPELAENLRQSTQVITADPPPNLTAFCIVGADNHCDCVEASRLIGAHILT
HHHHHHHHCCCHHHHHHHHHHCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEE
LPMHHHETVIPFLCDTSDARAVTKTVLVLYDRAAEEADVAHLLEKGSVDKMIADLSRVPK
EECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCC
QPRLDELTNLVIKGDASIVRQAVTTAGALQA
CCCHHHHHHEEEECCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLGCYDIEMRTRNAAVLVVLFSHSTKHHFKSVDFPADVLSIADKEDTYFTNTPDILANF
CCCEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCHHHHHHCCCCCCEECCCHHHHHHH
IKDVSAPYDLVITIGGSKGGHGALYHGTLLARMIEKPVRVLAFSPVVMLSDNPNDVLYVS
HHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCEEEEE
YQKLMERAQTTPELAENLRQSTQVITADPPPNLTAFCIVGADNHCDCVEASRLIGAHILT
HHHHHHHHCCCHHHHHHHHHHCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEE
LPMHHHETVIPFLCDTSDARAVTKTVLVLYDRAAEEADVAHLLEKGSVDKMIADLSRVPK
EECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCC
QPRLDELTNLVIKGDASIVRQAVTTAGALQA
CCCHHHHHHEEEECCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA