Click here to switch to the map view.

The map label for this gene is yjeB [C]

Identifier: 222102654

GI number: 222102654

Start: 292394

End: 292912

Strand: Direct

Name: yjeB [C]

Synonym: Avi_7313

Alternate gene names: 222102654

Gene position: 292394-292912 (Clockwise)

Preceding gene: 222102653

Following gene: 222102657

Centisome position: 46.28

GC content: 61.66

Gene sequence:

>519_bases
ATGCGCCTGAAGCGGCAATCCGAAATAGCGATCGGTATATTGACGGTCTGCGCGAAAAGTCCATCGACGAAATACCCAGC
CCAGCATCTGGCGCAAGAGGTCGGCGCGACGAGGGATCATGCCTATCAAGTTGTCGCTCTTCTGGTCCGCAACGGCTTTC
TCAACAGCGATCGCGGGCCGGGCGGTGGTCTGCGCCTTGCGCGTGATGCCAAGGACATCAAGCTCGCCGATGTGCTGCGG
ATCACCCAGCCGGAACTGGACGGCAACGCGGAAGAACCGGAGCCCGGCACGCTCAAAGGCCAACCCTTGCTTGACGGCAT
CGTTGCCGCAGCCTCGTCCTTTCTTGTCAGTTTGCTCGACCGCTTTACTGTCGCGGACCTCGTGGCCTCGCCCGATAGCT
CCGCTATCGCTTGTCTGGAGTGTAGCCTCGTGACCTCACGCCCTGTTCGCGAGCGTCTGATGCTGTTGCCCGCGCCCCAA
CTGTCCCCCGTGGACGACACTCTGGAAGCAGACGCCTGA

Upstream 100 bases:

>100_bases
TGCCATTGCCTGATATTGTTTTGCACAATGAAGCCCATGGTCACCATCAGCCAAATATGCGACTATGGCTGAACGAGTAA
CTCCCTTGATAGTGTCATCC

Downstream 100 bases:

>100_bases
TTGCCCTGAGGCAACGGATGGGCGGTCCGCGATGAGATCGGCGAGCGTGAACTTGTCAGCCATTCGCACGAAATTCACTG
ATGCGGCTTCAACGGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Siderophore Biosynthesis Protein; Rhizobial Iron Transcriptional Regulator Protein; Conserved Transcriptional Regulator; Rrf2 Family; Transcriptional Regulator BadM/Rrf2 Family

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRLKRQSEIAIGILTVCAKSPSTKYPAQHLAQEVGATRDHAYQVVALLVRNGFLNSDRGPGGGLRLARDAKDIKLADVLR
ITQPELDGNAEEPEPGTLKGQPLLDGIVAAASSFLVSLLDRFTVADLVASPDSSAIACLECSLVTSRPVRERLMLLPAPQ
LSPVDDTLEADA

Sequences:

>Translated_172_residues
MRLKRQSEIAIGILTVCAKSPSTKYPAQHLAQEVGATRDHAYQVVALLVRNGFLNSDRGPGGGLRLARDAKDIKLADVLR
ITQPELDGNAEEPEPGTLKGQPLLDGIVAAASSFLVSLLDRFTVADLVASPDSSAIACLECSLVTSRPVRERLMLLPAPQ
LSPVDDTLEADA
>Mature_172_residues
MRLKRQSEIAIGILTVCAKSPSTKYPAQHLAQEVGATRDHAYQVVALLVRNGFLNSDRGPGGGLRLARDAKDIKLADVLR
ITQPELDGNAEEPEPGTLKGQPLLDGIVAAASSFLVSLLDRFTVADLVASPDSSAIACLECSLVTSRPVRERLMLLPAPQ
LSPVDDTLEADA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18309; Mature: 18309

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKRQSEIAIGILTVCAKSPSTKYPAQHLAQEVGATRDHAYQVVALLVRNGFLNSDRGP
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
GGGLRLARDAKDIKLADVLRITQPELDGNAEEPEPGTLKGQPLLDGIVAAASSFLVSLLD
CCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RFTVADLVASPDSSAIACLECSLVTSRPVRERLMLLPAPQLSPVDDTLEADA
HHHHHHHHCCCCCCEEEEEEEHHHCCCCHHHHHHHCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRLKRQSEIAIGILTVCAKSPSTKYPAQHLAQEVGATRDHAYQVVALLVRNGFLNSDRGP
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
GGGLRLARDAKDIKLADVLRITQPELDGNAEEPEPGTLKGQPLLDGIVAAASSFLVSLLD
CCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RFTVADLVASPDSSAIACLECSLVTSRPVRERLMLLPAPQLSPVDDTLEADA
HHHHHHHHCCCCCCEEEEEEEHHHCCCCHHHHHHHCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA