| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is ppsB [H]
Identifier: 222102643
GI number: 222102643
Start: 263446
End: 267846
Strand: Reverse
Name: ppsB [H]
Synonym: Avi_7299
Alternate gene names: 222102643
Gene position: 267846-263446 (Counterclockwise)
Preceding gene: 222102644
Following gene: 222102642
Centisome position: 42.4
GC content: 61.33
Gene sequence:
>4401_bases ATGAATGACCTGTCCGCAGCCCCTCTTTCCGATGACAACAGGCATCATATTGCCGTCATTGGCATGGCTGGCCGCTTTCC CGGTGCACCGGATGTTGAACGCTTCTGGCAAAACCTGGTTGATGGTGCGGAATCGATTGAGCGCCTCTCGCCGGAAGCGC TCAAGCAACGCGGCGTCTCTGCGGAAATGGCGGCATTACCCGATTTTGTCGCCGCCAGCACACCGCTGGCGGGTGCGGAT CGCTTCGATGCGGGTTTTTTCGGCTACAGCCCGGCCGAGGCTGAAATTCTCGATCCGCAGCAGCGTATCTTCCTTGAATG CGCCTGGCAGGCGCTGGAAGCCGCCGGTTATGTGGGTGATCGCACCCAAGGACCGATTGGCGTTTTCGCCGCCGCTGGCA TCAATACCTATGTCTTCAACCTGCATGACAATAGCCGCATCCGCGAGACCGTCAGCCCCTATGAGCTGTTCGTTGGCAAT GACAAGGACTTTCTAGCCACCCGTACAGCGTTCAAGCTGAACCTGCGAGGCCCGGCCATTACCGTGCAAACCGCCTGCTC CTCCTCGCTCGTTGCCGTCCACATGGCCGCCCAGAGCCTGCTGTCCGGCGATTGCGACATGGCGCTGGCTGGCGGCATTG CACTCTCGCAGTCCTCCGGCTACCGCGCTCGCGAAGGCGGAATCCTCTCGCCTGATGGCCATTGCCGCGCTTTTGATGCG GCCTCAAGCGGCACGGTCCCCGGCAGCGGGGTCGGTATCGTCGTTTTGAAACGGCTGGAAGATGCGCTGGCCGATGGCGA CACGATAGACGCCGTCATCCTTGGCTCTGCGATCAACAATGACGGTGCGTTGAAGGCGAGCTTCACCGCGCCGCAGGTCG ATAGTCAGGCGGCGGTGATCGCCGATGCGCAGGCCATGGCAGGCGTGCGCGCTGATACCATTGGCTATATCGAGGCCCAT GGAACGGGCACCAGACTCGGCGACCCGATAGAGGTTGCAGCACTGACCAAGGCGTTTCGCCGCGATACCGAGCGCCGGGG CTTCTGCGCGCTCGGCTCCGTCAAAACCAATATTGGCCATCTCGACACCGCCGCCGGTATTGCAGGTTTCATCAAGGCCG TGCTGGCCCTGAAAAACCGGCGGATTCCGGCAAGCCTCCACTATGAGAACCCGAATCCGCAGATTGATTTCGCAGCCAGC CCCTTCTTCGTCAATCAACGTTTGCGCGATTGGGACAATCAGATTGGCACGCGCCGCGCAGGCGTAAGCTCCTTCGGCAT TGGCGGGACCAATGCCCATGTCGTGCTGGAAGAGGCCCCACCCAGCCCGGCATCAAAGGCAGGCGGCGGCCCGGAACTGT TGCTTGTGTCGGCACGAACCGAGGAGCAGCTTGCAGCCAGCAGCGAGGCCCTCGCAGCAGGCTTGGACCGTGCAGATGCC CCGGCGCTTGCGGATGTGGCGCACACGTTGCGCCATGGCCGTCGCGATTTTGCCAAGCGCCGCTTCGTCGTGGCACGCGA TGCCAAAGAGGCTGCCAGCAATCTGCGCAACCTCTCTCAAACCGCCACGGCGGAAGGCGAGACAGCGCAAGCCGTTTTCC TGTTTCCCGGTCAGGGCAGTCCATATACGGCGATGGGCAAGGCGCTTTACGCCGACCTGCCAGCCTTTCGCGCCCCGTTT GATGCCTGCGCATCCAAACTGGATGGGCTGATGGGGATCAACTTCAAAGCCTGCCTGTTTTCGAACGCGGATGACCTTGA CCGCACGGCATTTGCCCAACCCGCGCTCTTTGCCGTTGAATATGCGCTTGCGCAAGCCTTGATGAGCCACGGCGTCAAAC CGACGGCCCTGCATGGCCACAGCATTGGCGAATATGTCGCCGCCTGCCTTGCGGGTATCTTCGACCTCGAAACAGCGCTC CAGCTCGTCGTTGCGCGCGGGCGGTTGATGCAGGCTCAAGCACCCGGTGCCATGCTGGCGGTGATGCATGCGGATGAGCC AATCACGCCGTGGCTTGATGAGGTCATTACGCTGGCTGCGGCCAATGCGCACGGTGTCAGCGTTGTCTCCGGCCCGGTGG AGGCAATTGCAAGCCTACAAGTGCGCCTGAAAAACAAGGGCATTGCAGGGCGTATGCTGAAAACCGCCCACGCCTTCCAC TCGCCAATGATGACGGAAGCGGCAGTACAGTTTCGCAATGTCGTTGCAGGTGTGCGCCTCTCAGTGCCGCAAATTCCTCT GATTTCCAATGTCACGGGAACATGGATGACGGCACAGGATGCGACCGACCCGGACTATTGGGCGCGTCACCTGTTGCAGC CCGTCCGCTTCGAAGATGGGACACGCACACTGCAAGCCCTTGCAGCACCTGTTTTCATCGAAATCGGCCCCGGTCGCGCA CTCGGCACCTTGACCGCTGTGGCGGGCGTTGATGGAAGCCGAATTCTGGCAACACTCGCAGAAGGCAAGGATGAATCAGG GCAGGTGTTGTCTGCTGTCGGTCAGTTCTGGCAATTGAACGGCGTTCTGGATTCAGTTGAAGCCTCTGGCCGACGCCGCG TACGGCTTCCCACCTATCCCTTCCAAAGCGAACGTTACTGGGTCGATGCGGATAGCGAGCCTGCCACGCCCAAAAGAACA GCAGCACCTGCTGAAGGCCCCGGCCTCTACCGCACCAATTGGCGGCGTGCGCAATTGAGCCACGGGCCTAATCGGTTGAA GGGCCGCGTGCTTGTTTTTGACGATGGTCAGCTTGGCTCCACTCTCGCCACTGAGCTTGAGCGAAGTGGTGCGGAACCCT ATCGCGCATTGATCGGCGCTGGTTTCAGTGAACCCGACTTCCGCTGCTTCAGCCTCCGCCCCACGATCAGCGAAGACTAC GCCAGCCTTTTCGAGACCCTTGCCGAGCGGGGGGCAAGCCCAGACCATATCGTCTTCGGCTGGCCTCTCACCCCTTGCTC GAACGAAGCGCCGGAAGCTGCGGCGCAAGCCCTTCTGGCGCTGGTGCGGGAACTGGCCAAGAACGACCGCGCGGTCACCC TCACGCTTCTGACAAGATCGGCAGCCGATGTGACGGGTCTGGAAGATCTCGATATTGCGCAGGCTCTGGTGGCTGGCACT CTCCAGGTGATCGCCCAGGAATATCCGTCGCTCCATTGCCGTCATATCGACATCGATGCTGCACGGCCAATTGAGAGTGC AAGGCGTATTCGCGACGCTCTGTCGGGGAAAGACGATGTGCTCGCCTTGCGTGGCGCGCATCGCTGGCTGCCGGAGACGG AACGGTTTGACGCGCCGCAAGGCGGCCCGGACTTCAAGCGCAACGGCGTCTATGTGGTCGTCGGCGATATCGTTGATGGC GTTGGCAAGACCTGGGTTGATGCTCTGTCTGGGCTCGGCGCAACCGTCGCCTTGCTTCAAGATACTACGGCACCGGCTTT TGAGTATCCGGCACGTCTCAAACGGCAGCTCGATTGCGGCGATGCCGCCGCCTTGAAAGGCGCTCTGGACGATGTGTTCG CAGAGCTGGGCCGGATCGACGGCATCTTTCTGAGCCTGCCGCAGTCGAACCATCAATCCGCCGCGCTGATTGGTGAGCTG ACGGATGCCCATTGGGCCTATAACATCTCGAGCAAACTGCGCCCGGTTCGTGCGCTTGGTGAAGCTGTCGCGAAGCGGAA AATTGGCTTTTGCTGCGTTCAGTCCTCGCTCTCAACCCTCGTTGGCGGGCTCGGCCTTGGTGCTTACGCCGCCACGCACC ATGCCATCGACCGGATTGTCGCCGAAGAGAACAAGAACGGCACCACGCCATGGTTTGCGATTGGCTATCCACTGATCGAG GCGGAACCCGGCACGACCTTGCAGGCGACGGGCCGTGCAAACGCCTTCGCGATATCGACTGAGGCCGCATGGGATCTGAC GCGATGCCTGATTGAAAACGGCGCAACCGGACAGACCATGCTGTCGGGTGGGACCATTCCCCCGGTCACGTCCGACATCG ATGCGCAAGAGGCAGCCGCCACTGACGGCGGGCGTGGACGCCCCGCACTCGGTGTCGCCTATCGCAAACCGGGCAATGAC ACCGAGGCGAGGATCATCGGCATTTTCGAAGAGATCCTCGGCCTGTCACCCATCGGGGCCGATGACGGCTTTTATGAACT CGGCGGCCATTCCCTGCTCGCCATCCGCGCCGTTGCCAAACTCCGCGAAGCCTTCCCCGTCGATATCGCCATGCGCGAGC TGCTTTTCGACAATCCGACCGCCGCAGCCATCGCCAAATCGATTTTGGAGCGCATGACGGAGAAGACCGACCTTTCTGCT CTCGCCGATCTTCTCGATGAGGTCGATACCCTATCCGACGCCGATGTGAGCAGGCTTCTCGCCGGAGGAAATGCACGATG A
Upstream 100 bases:
>100_bases CCGTTTTGAGCGCGGACGGCTCGGCCTCATCGATCCCAAGGGCAAAGGTTGCCCGTTTCATTCCTGAGCGTACCACCAGA ACAGATCAAGGAACCTTGTT
Downstream 100 bases:
>100_bases ACGAACTTTTCGCCAAGATCGCCGGGCTTTCGCCGGAGCGGCGGGCGCTACTGGAACAGAAGCTGAAAGCACAGGGCATC ACGTTTCCCGCCCCCTCCGG
Product: polyketide synthetase
Products: [acyl carrier protein]; acetoacetyl-ACP; CO2; [acyl carrier protein]; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 1466; Mature: 1466
Protein sequence:
>1466_residues MNDLSAAPLSDDNRHHIAVIGMAGRFPGAPDVERFWQNLVDGAESIERLSPEALKQRGVSAEMAALPDFVAASTPLAGAD RFDAGFFGYSPAEAEILDPQQRIFLECAWQALEAAGYVGDRTQGPIGVFAAAGINTYVFNLHDNSRIRETVSPYELFVGN DKDFLATRTAFKLNLRGPAITVQTACSSSLVAVHMAAQSLLSGDCDMALAGGIALSQSSGYRAREGGILSPDGHCRAFDA ASSGTVPGSGVGIVVLKRLEDALADGDTIDAVILGSAINNDGALKASFTAPQVDSQAAVIADAQAMAGVRADTIGYIEAH GTGTRLGDPIEVAALTKAFRRDTERRGFCALGSVKTNIGHLDTAAGIAGFIKAVLALKNRRIPASLHYENPNPQIDFAAS PFFVNQRLRDWDNQIGTRRAGVSSFGIGGTNAHVVLEEAPPSPASKAGGGPELLLVSARTEEQLAASSEALAAGLDRADA PALADVAHTLRHGRRDFAKRRFVVARDAKEAASNLRNLSQTATAEGETAQAVFLFPGQGSPYTAMGKALYADLPAFRAPF DACASKLDGLMGINFKACLFSNADDLDRTAFAQPALFAVEYALAQALMSHGVKPTALHGHSIGEYVAACLAGIFDLETAL QLVVARGRLMQAQAPGAMLAVMHADEPITPWLDEVITLAAANAHGVSVVSGPVEAIASLQVRLKNKGIAGRMLKTAHAFH SPMMTEAAVQFRNVVAGVRLSVPQIPLISNVTGTWMTAQDATDPDYWARHLLQPVRFEDGTRTLQALAAPVFIEIGPGRA LGTLTAVAGVDGSRILATLAEGKDESGQVLSAVGQFWQLNGVLDSVEASGRRRVRLPTYPFQSERYWVDADSEPATPKRT AAPAEGPGLYRTNWRRAQLSHGPNRLKGRVLVFDDGQLGSTLATELERSGAEPYRALIGAGFSEPDFRCFSLRPTISEDY ASLFETLAERGASPDHIVFGWPLTPCSNEAPEAAAQALLALVRELAKNDRAVTLTLLTRSAADVTGLEDLDIAQALVAGT LQVIAQEYPSLHCRHIDIDAARPIESARRIRDALSGKDDVLALRGAHRWLPETERFDAPQGGPDFKRNGVYVVVGDIVDG VGKTWVDALSGLGATVALLQDTTAPAFEYPARLKRQLDCGDAAALKGALDDVFAELGRIDGIFLSLPQSNHQSAALIGEL TDAHWAYNISSKLRPVRALGEAVAKRKIGFCCVQSSLSTLVGGLGLGAYAATHHAIDRIVAEENKNGTTPWFAIGYPLIE AEPGTTLQATGRANAFAISTEAAWDLTRCLIENGATGQTMLSGGTIPPVTSDIDAQEAAATDGGRGRPALGVAYRKPGND TEARIIGIFEEILGLSPIGADDGFYELGGHSLLAIRAVAKLREAFPVDIAMRELLFDNPTAAAIAKSILERMTEKTDLSA LADLLDEVDTLSDADVSRLLAGGNAR
Sequences:
>Translated_1466_residues MNDLSAAPLSDDNRHHIAVIGMAGRFPGAPDVERFWQNLVDGAESIERLSPEALKQRGVSAEMAALPDFVAASTPLAGAD RFDAGFFGYSPAEAEILDPQQRIFLECAWQALEAAGYVGDRTQGPIGVFAAAGINTYVFNLHDNSRIRETVSPYELFVGN DKDFLATRTAFKLNLRGPAITVQTACSSSLVAVHMAAQSLLSGDCDMALAGGIALSQSSGYRAREGGILSPDGHCRAFDA ASSGTVPGSGVGIVVLKRLEDALADGDTIDAVILGSAINNDGALKASFTAPQVDSQAAVIADAQAMAGVRADTIGYIEAH GTGTRLGDPIEVAALTKAFRRDTERRGFCALGSVKTNIGHLDTAAGIAGFIKAVLALKNRRIPASLHYENPNPQIDFAAS PFFVNQRLRDWDNQIGTRRAGVSSFGIGGTNAHVVLEEAPPSPASKAGGGPELLLVSARTEEQLAASSEALAAGLDRADA PALADVAHTLRHGRRDFAKRRFVVARDAKEAASNLRNLSQTATAEGETAQAVFLFPGQGSPYTAMGKALYADLPAFRAPF DACASKLDGLMGINFKACLFSNADDLDRTAFAQPALFAVEYALAQALMSHGVKPTALHGHSIGEYVAACLAGIFDLETAL QLVVARGRLMQAQAPGAMLAVMHADEPITPWLDEVITLAAANAHGVSVVSGPVEAIASLQVRLKNKGIAGRMLKTAHAFH SPMMTEAAVQFRNVVAGVRLSVPQIPLISNVTGTWMTAQDATDPDYWARHLLQPVRFEDGTRTLQALAAPVFIEIGPGRA LGTLTAVAGVDGSRILATLAEGKDESGQVLSAVGQFWQLNGVLDSVEASGRRRVRLPTYPFQSERYWVDADSEPATPKRT AAPAEGPGLYRTNWRRAQLSHGPNRLKGRVLVFDDGQLGSTLATELERSGAEPYRALIGAGFSEPDFRCFSLRPTISEDY ASLFETLAERGASPDHIVFGWPLTPCSNEAPEAAAQALLALVRELAKNDRAVTLTLLTRSAADVTGLEDLDIAQALVAGT LQVIAQEYPSLHCRHIDIDAARPIESARRIRDALSGKDDVLALRGAHRWLPETERFDAPQGGPDFKRNGVYVVVGDIVDG VGKTWVDALSGLGATVALLQDTTAPAFEYPARLKRQLDCGDAAALKGALDDVFAELGRIDGIFLSLPQSNHQSAALIGEL TDAHWAYNISSKLRPVRALGEAVAKRKIGFCCVQSSLSTLVGGLGLGAYAATHHAIDRIVAEENKNGTTPWFAIGYPLIE AEPGTTLQATGRANAFAISTEAAWDLTRCLIENGATGQTMLSGGTIPPVTSDIDAQEAAATDGGRGRPALGVAYRKPGND TEARIIGIFEEILGLSPIGADDGFYELGGHSLLAIRAVAKLREAFPVDIAMRELLFDNPTAAAIAKSILERMTEKTDLSA LADLLDEVDTLSDADVSRLLAGGNAR >Mature_1466_residues MNDLSAAPLSDDNRHHIAVIGMAGRFPGAPDVERFWQNLVDGAESIERLSPEALKQRGVSAEMAALPDFVAASTPLAGAD RFDAGFFGYSPAEAEILDPQQRIFLECAWQALEAAGYVGDRTQGPIGVFAAAGINTYVFNLHDNSRIRETVSPYELFVGN DKDFLATRTAFKLNLRGPAITVQTACSSSLVAVHMAAQSLLSGDCDMALAGGIALSQSSGYRAREGGILSPDGHCRAFDA ASSGTVPGSGVGIVVLKRLEDALADGDTIDAVILGSAINNDGALKASFTAPQVDSQAAVIADAQAMAGVRADTIGYIEAH GTGTRLGDPIEVAALTKAFRRDTERRGFCALGSVKTNIGHLDTAAGIAGFIKAVLALKNRRIPASLHYENPNPQIDFAAS PFFVNQRLRDWDNQIGTRRAGVSSFGIGGTNAHVVLEEAPPSPASKAGGGPELLLVSARTEEQLAASSEALAAGLDRADA PALADVAHTLRHGRRDFAKRRFVVARDAKEAASNLRNLSQTATAEGETAQAVFLFPGQGSPYTAMGKALYADLPAFRAPF DACASKLDGLMGINFKACLFSNADDLDRTAFAQPALFAVEYALAQALMSHGVKPTALHGHSIGEYVAACLAGIFDLETAL QLVVARGRLMQAQAPGAMLAVMHADEPITPWLDEVITLAAANAHGVSVVSGPVEAIASLQVRLKNKGIAGRMLKTAHAFH SPMMTEAAVQFRNVVAGVRLSVPQIPLISNVTGTWMTAQDATDPDYWARHLLQPVRFEDGTRTLQALAAPVFIEIGPGRA LGTLTAVAGVDGSRILATLAEGKDESGQVLSAVGQFWQLNGVLDSVEASGRRRVRLPTYPFQSERYWVDADSEPATPKRT AAPAEGPGLYRTNWRRAQLSHGPNRLKGRVLVFDDGQLGSTLATELERSGAEPYRALIGAGFSEPDFRCFSLRPTISEDY ASLFETLAERGASPDHIVFGWPLTPCSNEAPEAAAQALLALVRELAKNDRAVTLTLLTRSAADVTGLEDLDIAQALVAGT LQVIAQEYPSLHCRHIDIDAARPIESARRIRDALSGKDDVLALRGAHRWLPETERFDAPQGGPDFKRNGVYVVVGDIVDG VGKTWVDALSGLGATVALLQDTTAPAFEYPARLKRQLDCGDAAALKGALDDVFAELGRIDGIFLSLPQSNHQSAALIGEL TDAHWAYNISSKLRPVRALGEAVAKRKIGFCCVQSSLSTLVGGLGLGAYAATHHAIDRIVAEENKNGTTPWFAIGYPLIE AEPGTTLQATGRANAFAISTEAAWDLTRCLIENGATGQTMLSGGTIPPVTSDIDAQEAAATDGGRGRPALGVAYRKPGND TEARIIGIFEEILGLSPIGADDGFYELGGHSLLAIRAVAKLREAFPVDIAMRELLFDNPTAAAIAKSILERMTEKTDLSA LADLLDEVDTLSDADVSRLLAGGNAR
Specific function: Polyketide synthase involved in phenolpthiocerol synthesis [H]
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI41872631, Length=799, Percent_Identity=28.6608260325407, Blast_Score=258, Evalue=2e-68, Organism=Homo sapiens, GI8923559, Length=449, Percent_Identity=26.7260579064588, Blast_Score=103, Evalue=2e-21, Organism=Escherichia coli, GI1787337, Length=285, Percent_Identity=30.5263157894737, Blast_Score=104, Evalue=4e-23, Organism=Escherichia coli, GI1787334, Length=302, Percent_Identity=30.1324503311258, Blast_Score=98, Evalue=4e-21, Organism=Escherichia coli, GI1788663, Length=280, Percent_Identity=32.1428571428571, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17550940, Length=855, Percent_Identity=31.3450292397661, Blast_Score=336, Evalue=5e-92, Organism=Caenorhabditis elegans, GI212642053, Length=857, Percent_Identity=27.3045507584597, Blast_Score=261, Evalue=3e-69, Organism=Caenorhabditis elegans, GI71983541, Length=300, Percent_Identity=31.3333333333333, Blast_Score=99, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983535, Length=275, Percent_Identity=30.5454545454545, Blast_Score=92, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71984332, Length=320, Percent_Identity=25.9375, Blast_Score=82, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320904, Length=305, Percent_Identity=27.8688524590164, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI221330659, Length=848, Percent_Identity=27.8301886792453, Blast_Score=261, Evalue=4e-69, Organism=Drosophila melanogaster, GI19920632, Length=806, Percent_Identity=28.1637717121588, Blast_Score=260, Evalue=5e-69, Organism=Drosophila melanogaster, GI24581345, Length=807, Percent_Identity=28.0049566294919, Blast_Score=241, Evalue=3e-63, Organism=Drosophila melanogaster, GI24644341, Length=445, Percent_Identity=26.9662921348315, Blast_Score=102, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR000794 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR013968 - InterPro: IPR020806 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: 2.3.1.41 [C]
Molecular weight: Translated: 155150; Mature: 155150
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN ; PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLSAAPLSDDNRHHIAVIGMAGRFPGAPDVERFWQNLVDGAESIERLSPEALKQRGVS CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCC AEMAALPDFVAASTPLAGADRFDAGFFGYSPAEAEILDPQQRIFLECAWQALEAAGYVGD HHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC RTQGPIGVFAAAGINTYVFNLHDNSRIRETVSPYELFVGNDKDFLATRTAFKLNLRGPAI CCCCCEEEEEECCCEEEEEEECCCCHHHHCCCCEEEEECCCCCCEEEEEEEEEEECCCEE TVQTACSSSLVAVHMAAQSLLSGDCDMALAGGIALSQSSGYRAREGGILSPDGHCRAFDA EEECCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCEEECC ASSGTVPGSGVGIVVLKRLEDALADGDTIDAVILGSAINNDGALKASFTAPQVDSQAAVI CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCEE ADAQAMAGVRADTIGYIEAHGTGTRLGDPIEVAALTKAFRRDTERRGFCALGSVKTNIGH ECHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHCCCCC LDTAAGIAGFIKAVLALKNRRIPASLHYENPNPQIDFAASPFFVNQRLRDWDNQIGTRRA CHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCHHC GVSSFGIGGTNAHVVLEEAPPSPASKAGGGPELLLVSARTEEQLAASSEALAAGLDRADA CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC PALADVAHTLRHGRRDFAKRRFVVARDAKEAASNLRNLSQTATAEGETAQAVFLFPGQGS CHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC PYTAMGKALYADLPAFRAPFDACASKLDGLMGINFKACLFSNADDLDRTAFAQPALFAVE CHHHHHHHHHHCCCHHCCCHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHCCHHHHHHH YALAQALMSHGVKPTALHGHSIGEYVAACLAGIFDLETALQLVVARGRLMQAQAPGAMLA HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCEEEE VMHADEPITPWLDEVITLAAANAHGVSVVSGPVEAIASLQVRLKNKGIAGRMLKTAHAFH EEECCCCCCHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SPMMTEAAVQFRNVVAGVRLSVPQIPLISNVTGTWMTAQDATDPDYWARHLLQPVRFEDG CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCH TRTLQALAAPVFIEIGPGRALGTLTAVAGVDGSRILATLAEGKDESGQVLSAVGQFWQLN HHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH GVLDSVEASGRRRVRLPTYPFQSERYWVDADSEPATPKRTAAPAEGPGLYRTNWRRAQLS HHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC HGPNRLKGRVLVFDDGQLGSTLATELERSGAEPYRALIGAGFSEPDFRCFSLRPTISEDY CCCCHHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHH ASLFETLAERGASPDHIVFGWPLTPCSNEAPEAAAQALLALVRELAKNDRAVTLTLLTRS HHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECC AADVTGLEDLDIAQALVAGTLQVIAQEYPSLHCRHIDIDAARPIESARRIRDALSGKDDV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE LALRGAHRWLPETERFDAPQGGPDFKRNGVYVVVGDIVDGVGKTWVDALSGLGATVALLQ EEECCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEHC DTTAPAFEYPARLKRQLDCGDAAALKGALDDVFAELGRIDGIFLSLPQSNHQSAALIGEL CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH TDAHWAYNISSKLRPVRALGEAVAKRKIGFCCVQSSLSTLVGGLGLGAYAATHHAIDRIV CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AEENKNGTTPWFAIGYPLIEAEPGTTLQATGRANAFAISTEAAWDLTRCLIENGATGQTM HHCCCCCCCCEEEECCEEEECCCCCEEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCEE LSGGTIPPVTSDIDAQEAAATDGGRGRPALGVAYRKPGNDTEARIIGIFEEILGLSPIGA ECCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC DDGFYELGGHSLLAIRAVAKLREAFPVDIAMRELLFDNPTAAAIAKSILERMTEKTDLSA CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LADLLDEVDTLSDADVSRLLAGGNAR HHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure MNDLSAAPLSDDNRHHIAVIGMAGRFPGAPDVERFWQNLVDGAESIERLSPEALKQRGVS CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCC AEMAALPDFVAASTPLAGADRFDAGFFGYSPAEAEILDPQQRIFLECAWQALEAAGYVGD HHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC RTQGPIGVFAAAGINTYVFNLHDNSRIRETVSPYELFVGNDKDFLATRTAFKLNLRGPAI CCCCCEEEEEECCCEEEEEEECCCCHHHHCCCCEEEEECCCCCCEEEEEEEEEEECCCEE TVQTACSSSLVAVHMAAQSLLSGDCDMALAGGIALSQSSGYRAREGGILSPDGHCRAFDA EEECCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCEEECC ASSGTVPGSGVGIVVLKRLEDALADGDTIDAVILGSAINNDGALKASFTAPQVDSQAAVI CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCEE ADAQAMAGVRADTIGYIEAHGTGTRLGDPIEVAALTKAFRRDTERRGFCALGSVKTNIGH ECHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHCCCCC LDTAAGIAGFIKAVLALKNRRIPASLHYENPNPQIDFAASPFFVNQRLRDWDNQIGTRRA CHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCHHC GVSSFGIGGTNAHVVLEEAPPSPASKAGGGPELLLVSARTEEQLAASSEALAAGLDRADA CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC PALADVAHTLRHGRRDFAKRRFVVARDAKEAASNLRNLSQTATAEGETAQAVFLFPGQGS CHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC PYTAMGKALYADLPAFRAPFDACASKLDGLMGINFKACLFSNADDLDRTAFAQPALFAVE CHHHHHHHHHHCCCHHCCCHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHCCHHHHHHH YALAQALMSHGVKPTALHGHSIGEYVAACLAGIFDLETALQLVVARGRLMQAQAPGAMLA HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCEEEE VMHADEPITPWLDEVITLAAANAHGVSVVSGPVEAIASLQVRLKNKGIAGRMLKTAHAFH EEECCCCCCHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SPMMTEAAVQFRNVVAGVRLSVPQIPLISNVTGTWMTAQDATDPDYWARHLLQPVRFEDG CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCH TRTLQALAAPVFIEIGPGRALGTLTAVAGVDGSRILATLAEGKDESGQVLSAVGQFWQLN HHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH GVLDSVEASGRRRVRLPTYPFQSERYWVDADSEPATPKRTAAPAEGPGLYRTNWRRAQLS HHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC HGPNRLKGRVLVFDDGQLGSTLATELERSGAEPYRALIGAGFSEPDFRCFSLRPTISEDY CCCCHHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHH ASLFETLAERGASPDHIVFGWPLTPCSNEAPEAAAQALLALVRELAKNDRAVTLTLLTRS HHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECC AADVTGLEDLDIAQALVAGTLQVIAQEYPSLHCRHIDIDAARPIESARRIRDALSGKDDV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE LALRGAHRWLPETERFDAPQGGPDFKRNGVYVVVGDIVDGVGKTWVDALSGLGATVALLQ EEECCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEHC DTTAPAFEYPARLKRQLDCGDAAALKGALDDVFAELGRIDGIFLSLPQSNHQSAALIGEL CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH TDAHWAYNISSKLRPVRALGEAVAKRKIGFCCVQSSLSTLVGGLGLGAYAATHHAIDRIV CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AEENKNGTTPWFAIGYPLIEAEPGTTLQATGRANAFAISTEAAWDLTRCLIENGATGQTM HHCCCCCCCCEEEECCEEEECCCCCEEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCEE LSGGTIPPVTSDIDAQEAAATDGGRGRPALGVAYRKPGNDTEARIIGIFEEILGLSPIGA ECCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC DDGFYELGGHSLLAIRAVAKLREAFPVDIAMRELLFDNPTAAAIAKSILERMTEKTDLSA CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LADLLDEVDTLSDADVSRLLAGGNAR HHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: None [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.138 {cis-9-hexadecenoyl-ACP}} 0.017 {cis-9-hexadecenoyl-ACP}} 0.012 {cis-3-decenoyl-ACP}} 0.04 {acetyl-ACP}} 0.031 {acetyl-ACP}} [C]
Substrates: acetyl-ACP; malonyl-ACP; acyl-ACP [C]
Specific reaction: acetyl-ACP + malonyl-ACP = [acyl carrier protein] + acetoacetyl-ACP + CO2 acyl-ACP + malonyl-ACP = [acyl carrier protein] + beta-ketoacyl-ACP + CO2 [C]
General reaction: Acyl group transfer [C]
Inhibitor: Acetyl-CoA; Acyl-CoA; Iodoacetamide; N-Ethyl maleimide acyl -ACP-derivatives protect, malonyl-ACP-decarboxylation, Cerulenin [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]