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The map label for this gene is nocQ [H]

Identifier: 222102595

GI number: 222102595

Start: 201900

End: 202670

Strand: Direct

Name: nocQ [H]

Synonym: Avi_7240

Alternate gene names: 222102595

Gene position: 201900-202670 (Clockwise)

Preceding gene: 222102594

Following gene: 222102596

Centisome position: 31.96

GC content: 57.98

Gene sequence:

>771_bases
ATGCGGCCAGGGCCTTGGTTGCACTGGCCGCGTGAACTGCGAGAGGGTTTCGCCCATATGCTTGAAAAACTGCATCTGCT
CGGGTTCGCGGAAGGTGGCTGGGGTCCGGCACTGATTGGTGCTGCCGCTCTGACTTTGTTGTTGTCCGTTCTGGGTTTTA
TGCTCGGCGCGTGTTTTGGCAGTCTGGCGGCAGCCGGTCGCTTATCATCGGCCCGTATCCCTCGCGTGATTGCCTCTGCC
TACGCCACCGTCTTTCGCGGCGTACCCGATCTGCTGACCATCTATCTGTTTTACTATGGCGGTAGCGTTGCCCTGACGAC
AGTTGCGCATTTTTTCGGTGCCAACTCATTTGTAGGGCTGCCCGCGTTGGCAACGGGTGTCGTGGCAATCGGCATGATTT
CGGGTGCCTATCAGGCTGAGGTCTACCGTGGCGCTTATCTTGCCGTCGAGCGGGGGCAATTTGATGCCGCCAAGGCGCTC
GACCTCTCCCGCAGCCAGATGCTTTTGTTGGTTATTCTGCCACAGTTGCTGCGGCACGCAATTCCTGGTCTTAGCAATGT
CTGGCAGCTCGTCCTGAAGGATTCCGCTCTGATTTCGGTGGTTGGTCTTGTGGAATTGATGCGCCAGTCGCAGATCGGTG
CTGGCTCAACCCGCGAGCCCTTCCTTTTTTATCTGGCCGCCGCATGCCTCTATTTTGTGATGGCGGGCGTAACGGGCCGT
TTCTTCCGCAGTGCTGAAGTGAGAACTTCGCGGGGGATCCTGCACTCATGA

Upstream 100 bases:

>100_bases
GCAATCTCCTCGGCTATTGCCGACGGGACCATCAAACGTCTCTCCGAAAAATGGGTGAAAACCGACGTGACACCGGTCAA
GTAACAGAGGTGCGGACCGC

Downstream 100 bases:

>100_bases
TCGATTTTGGGTTTTTCTTTGAGATCATTCCAAAACTGCTGTCGGGGCTGCCTCTGACCTTGACGCTCGCTGGCACCTCG
ATCGTCTGTGGCTTTGTTCT

Product: ABC transporter membrane spanning protein (nopaline)

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRPGPWLHWPRELREGFAHMLEKLHLLGFAEGGWGPALIGAAALTLLLSVLGFMLGACFGSLAAAGRLSSARIPRVIASA
YATVFRGVPDLLTIYLFYYGGSVALTTVAHFFGANSFVGLPALATGVVAIGMISGAYQAEVYRGAYLAVERGQFDAAKAL
DLSRSQMLLLVILPQLLRHAIPGLSNVWQLVLKDSALISVVGLVELMRQSQIGAGSTREPFLFYLAAACLYFVMAGVTGR
FFRSAEVRTSRGILHS

Sequences:

>Translated_256_residues
MRPGPWLHWPRELREGFAHMLEKLHLLGFAEGGWGPALIGAAALTLLLSVLGFMLGACFGSLAAAGRLSSARIPRVIASA
YATVFRGVPDLLTIYLFYYGGSVALTTVAHFFGANSFVGLPALATGVVAIGMISGAYQAEVYRGAYLAVERGQFDAAKAL
DLSRSQMLLLVILPQLLRHAIPGLSNVWQLVLKDSALISVVGLVELMRQSQIGAGSTREPFLFYLAAACLYFVMAGVTGR
FFRSAEVRTSRGILHS
>Mature_256_residues
MRPGPWLHWPRELREGFAHMLEKLHLLGFAEGGWGPALIGAAALTLLLSVLGFMLGACFGSLAAAGRLSSARIPRVIASA
YATVFRGVPDLLTIYLFYYGGSVALTTVAHFFGANSFVGLPALATGVVAIGMISGAYQAEVYRGAYLAVERGQFDAAKAL
DLSRSQMLLLVILPQLLRHAIPGLSNVWQLVLKDSALISVVGLVELMRQSQIGAGSTREPFLFYLAAACLYFVMAGVTGR
FFRSAEVRTSRGILHS

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=34.3891402714932, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=32.7433628318584, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=31.9444444444444, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787030, Length=216, Percent_Identity=34.2592592592593, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788645, Length=235, Percent_Identity=30.6382978723404, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI87082239, Length=219, Percent_Identity=30.5936073059361, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786873, Length=203, Percent_Identity=31.5270935960591, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787086, Length=166, Percent_Identity=30.1204819277108, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27462; Mature: 27462

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA