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The map label for this gene is rutA [H]

Identifier: 222102579

GI number: 222102579

Start: 186111

End: 187280

Strand: Reverse

Name: rutA [H]

Synonym: Avi_7216

Alternate gene names: 222102579

Gene position: 187280-186111 (Counterclockwise)

Preceding gene: 222102598

Following gene: 222102578

Centisome position: 29.64

GC content: 56.5

Gene sequence:

>1170_bases
ATGGCACTAATCGCTGAAAGCGCAAAAGAACCCGATTTGAAAGGTCCGCTGGATTTTGAAAACAGCCCCCTCAGCCGGGC
AGTGCGCCAACCATTGATGTTGGGCCTGTTTCTCAATTTGCAGGATATCAATTTTTCCAGCCTGCCCACCAGCAATAGCT
GGACCTTTGATTACAATGCCGAAGTGGTGAAAAAGGCCGATGCGCTGGGCTTTGAAATTGCCTTCAGCCGCACCCAATGG
CTGCCCAAAGGCGGCTATGACGGCGAGGCATCGCTGGACAGCTTTATTGCGCTGGGGGCCATGGCAGCCATCACCACCAA
TATCCTGCTGATCTCCACCATCCATGTGCTCTATGGCCCGCTGCACCCACTGCATCTGGCCAAATATGGCGCAACGCTGG
ATCATATCGCCAAGGGGCGCTGGGGCATCAATATCGTCACCGGACACCGTGCTATTGAGCATGAAATGTTCGGCTGGCAG
CGCATTGAGCACGACAAGCGCTATGACATGGCATCTGAGCTGTTCCATGTGCTGAATCGCCTCTGGAGCGAGACCGAGAA
CTTCTCCTATGAAGGCAAACTCAACCCCTGGGCCGTCAACAACGGCTGGATCACGCCGAAGCCTGAATTTGGCAGGCCGC
CTTTGGTCACCGCCACCGGCTCACCAGCCGGGATCGATTTTGCCGCCCGCCATTCCGATCTTGTCTTTGTGACCTCGCCG
GGCGGCGCGCATATTGAGAGTGCGTTGGAAACCCTGCCCGACCATATCGCCGCCATCAAAACCCGCGCCGCCTCCTATGG
TCGCCGGGTCAAAACCATCATCAACCCGATTGTGGTGAGCCGCGATACTGAGGCAGAAGCCTTCGCCTATGCCGACGCAA
TTGAGGCAGGCAAGCCACAACAAGGCACCCGTGCCTTTGCCACCAACAATTATGAAAGCGATGCCCATGCATGGCGTGGC
CGTGGCGATCCGCGCCACAAGCAAGGCCGCAATCTGGGTGGCAATATTGAAATCATCGGCTCACCGGAACAGGTGGTGGA
CCAATTGCTGGCCCTGCACAGGGCCGGAATTGATGGCATTCAGCTGAATTTCTACGATTTCCGCGACGATCTCGATTATT
TTGCGGAACGCATTTTGCCGCTGTTGAAACAGGCCGGGTTGCGGCTCTGA

Upstream 100 bases:

>100_bases
AAAACAGGTTTGCCCGCCAGCAGGCCATCCGCAGCCCCCCTTCCCATGGCGAGGAATTTGCCACCCTGCCTGGTTGGCCG
AAAGAAACAGGAGAAACCAC

Downstream 100 bases:

>100_bases
ACGGCAATGTCATTCATCAGCCACGGGCGCAAGCGTCCTTGGCCCTCGCCCATTTTATCAAGCCCCTTCATCCAAGGATA
GATTTGTGACCTCCTCTCCA

Product: monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MALIAESAKEPDLKGPLDFENSPLSRAVRQPLMLGLFLNLQDINFSSLPTSNSWTFDYNAEVVKKADALGFEIAFSRTQW
LPKGGYDGEASLDSFIALGAMAAITTNILLISTIHVLYGPLHPLHLAKYGATLDHIAKGRWGINIVTGHRAIEHEMFGWQ
RIEHDKRYDMASELFHVLNRLWSETENFSYEGKLNPWAVNNGWITPKPEFGRPPLVTATGSPAGIDFAARHSDLVFVTSP
GGAHIESALETLPDHIAAIKTRAASYGRRVKTIINPIVVSRDTEAEAFAYADAIEAGKPQQGTRAFATNNYESDAHAWRG
RGDPRHKQGRNLGGNIEIIGSPEQVVDQLLALHRAGIDGIQLNFYDFRDDLDYFAERILPLLKQAGLRL

Sequences:

>Translated_389_residues
MALIAESAKEPDLKGPLDFENSPLSRAVRQPLMLGLFLNLQDINFSSLPTSNSWTFDYNAEVVKKADALGFEIAFSRTQW
LPKGGYDGEASLDSFIALGAMAAITTNILLISTIHVLYGPLHPLHLAKYGATLDHIAKGRWGINIVTGHRAIEHEMFGWQ
RIEHDKRYDMASELFHVLNRLWSETENFSYEGKLNPWAVNNGWITPKPEFGRPPLVTATGSPAGIDFAARHSDLVFVTSP
GGAHIESALETLPDHIAAIKTRAASYGRRVKTIINPIVVSRDTEAEAFAYADAIEAGKPQQGTRAFATNNYESDAHAWRG
RGDPRHKQGRNLGGNIEIIGSPEQVVDQLLALHRAGIDGIQLNFYDFRDDLDYFAERILPLLKQAGLRL
>Mature_388_residues
ALIAESAKEPDLKGPLDFENSPLSRAVRQPLMLGLFLNLQDINFSSLPTSNSWTFDYNAEVVKKADALGFEIAFSRTQWL
PKGGYDGEASLDSFIALGAMAAITTNILLISTIHVLYGPLHPLHLAKYGATLDHIAKGRWGINIVTGHRAIEHEMFGWQR
IEHDKRYDMASELFHVLNRLWSETENFSYEGKLNPWAVNNGWITPKPEFGRPPLVTATGSPAGIDFAARHSDLVFVTSPG
GAHIESALETLPDHIAAIKTRAASYGRRVKTIINPIVVSRDTEAEAFAYADAIEAGKPQQGTRAFATNNYESDAHAWRGR
GDPRHKQGRNLGGNIEIIGSPEQVVDQLLALHRAGIDGIQLNFYDFRDDLDYFAERILPLLKQAGLRL

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=338, Percent_Identity=28.1065088757396, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 43063; Mature: 42932

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIAESAKEPDLKGPLDFENSPLSRAVRQPLMLGLFLNLQDINFSSLPTSNSWTFDYNA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEECCH
EVVKKADALGFEIAFSRTQWLPKGGYDGEASLDSFIALGAMAAITTNILLISTIHVLYGP
HHHHHHHHCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LHPLHLAKYGATLDHIAKGRWGINIVTGHRAIEHEMFGWQRIEHDKRYDMASELFHVLNR
CCHHHHHHHCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LWSETENFSYEGKLNPWAVNNGWITPKPEFGRPPLVTATGSPAGIDFAARHSDLVFVTSP
HHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECC
GGAHIESALETLPDHIAAIKTRAASYGRRVKTIINPIVVSRDTEAEAFAYADAIEAGKPQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
QGTRAFATNNYESDAHAWRGRGDPRHKQGRNLGGNIEIIGSPEQVVDQLLALHRAGIDGI
CCCEEEECCCCCCCHHHHCCCCCCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCE
QLNFYDFRDDLDYFAERILPLLKQAGLRL
EEEEEHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALIAESAKEPDLKGPLDFENSPLSRAVRQPLMLGLFLNLQDINFSSLPTSNSWTFDYNA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEECCH
EVVKKADALGFEIAFSRTQWLPKGGYDGEASLDSFIALGAMAAITTNILLISTIHVLYGP
HHHHHHHHCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LHPLHLAKYGATLDHIAKGRWGINIVTGHRAIEHEMFGWQRIEHDKRYDMASELFHVLNR
CCHHHHHHHCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LWSETENFSYEGKLNPWAVNNGWITPKPEFGRPPLVTATGSPAGIDFAARHSDLVFVTSP
HHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECC
GGAHIESALETLPDHIAAIKTRAASYGRRVKTIINPIVVSRDTEAEAFAYADAIEAGKPQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
QGTRAFATNNYESDAHAWRGRGDPRHKQGRNLGGNIEIIGSPEQVVDQLLALHRAGIDGI
CCCEEEECCCCCCCHHHHCCCCCCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCE
QLNFYDFRDDLDYFAERILPLLKQAGLRL
EEEEEHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA